Basic Information

Insect: Suillia variegata
Gene Symbol: ehn-3
Assembly: GCA_949127995.1
Location: OX421842.1:14728062-14735132[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00026 0.018 15.9 1.1 1 23 183 205 183 205 0.97

2 15 2.9 2e+02 3.1 6.4 1 23 211 234 211 234 0.95

3 15 0.00011 0.0076 17.1 0.7 2 23 537 558 536 558 0.97

4 15 0.57 41 5.3 2.9 1 23 564 587 564 587 0.94

5 15 0.75 53 5.0 1.4 1 23 612 635 612 635 0.95

6 15 0.028 2 9.5 3.4 2 23 681 702 680 702 0.97

7 15 0.0032 0.23 12.4 4.7 3 23 868 888 867 888 0.97

8 15 0.017 1.2 10.1 0.8 1 23 894 917 894 917 0.96

9 15 0.096 6.8 7.8 0.1 2 23 954 976 953 976 0.95

10 15 0.0048 0.34 11.9 0.5 1 23 990 1013 990 1013 0.96

11 15 0.031 2.2 9.3 7.6 1 23 1203 1225 1203 1225 0.98

12 15 0.00078 0.055 14.4 1.4 1 23 1230 1252 1230 1252 0.95

13 15 0.0011 0.075 13.9 6.9 1 23 1258 1281 1258 1281 0.95

14 15 0.01 0.72 10.9 0.1 3 19 1288 1306 1286 1307 0.92

15 15 0.72 51 5.0 1.1 1 13 1316 1328 1316 1330 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00026	0.018	15.9	1.1	1	23	183	205	183	205	0.97
2	15	2.9	2e+02	3.1	6.4	1	23	211	234	211	234	0.95
3	15	0.00011	0.0076	17.1	0.7	2	23	537	558	536	558	0.97
4	15	0.57	41	5.3	2.9	1	23	564	587	564	587	0.94
5	15	0.75	53	5.0	1.4	1	23	612	635	612	635	0.95
6	15	0.028	2	9.5	3.4	2	23	681	702	680	702	0.97
7	15	0.0032	0.23	12.4	4.7	3	23	868	888	867	888	0.97
8	15	0.017	1.2	10.1	0.8	1	23	894	917	894	917	0.96
9	15	0.096	6.8	7.8	0.1	2	23	954	976	953	976	0.95
10	15	0.0048	0.34	11.9	0.5	1	23	990	1013	990	1013	0.96
11	15	0.031	2.2	9.3	7.6	1	23	1203	1225	1203	1225	0.98
12	15	0.00078	0.055	14.4	1.4	1	23	1230	1252	1230	1252	0.95
13	15	0.0011	0.075	13.9	6.9	1	23	1258	1281	1258	1281	0.95
14	15	0.01	0.72	10.9	0.1	3	19	1288	1306	1286	1307	0.92
15	15	0.72	51	5.0	1.1	1	13	1316	1328	1316	1330	0.87

Sequence Information

Coding Sequence: atgcaacAAGAGGTGGGCGCAGTAGTAGCAGCTGCAGCAACGACGCCGTCGAAGACTGTAGACTTCAGCTTTAGGCTCGTCTGTCGAACGTGTCTTGCCGCCGACACGGAATTCTACAAACTGGAAGCGCCCATAGCAAACGACACGACGGAAAAACTAAGCTTTTCCGACTGTTTGCGCTATTGCACGACATCGCATCTGGACGTGGATGAAACGCCGGCGCAATTTCCCATATACATTTGCATTGAGTGCAGTGCAGCGCTGCAAGTAGCGTACAATTTTATACGCAATGCCATTGCAGCGCACGAAATACTGCGACAGAAGTTATGCGCTACTTTGTCTCCACAACGGCGCAATGGTGGACTGCAAAAAGTAAGCGGCGGCATTGGAGCAACATCAAAATGGGCAGCATCGATTtaTTCGGTTGAGGATGACAGCGCTGCTGGCAGCACTGGTCGTGTTATTGATAGAGGAGGTGGAGAAAGTGAAGGAGGCGGCACGGATGATGTTGTACTTGTTGTGCCGGAACAACTGCGGCCAATGCGCTATCGCTGTAAAATTTGTGGCGAAAAAGTGGAGACAAAGAAATCGCTAAAGGAGCACGTCAAATTCCATTTGGACATTATTTCGTACTGCTGTCAATTGTGCAAATTTGAGAGCAAGAAACGAAGTCATCTCAGCGATCATTACAGCATTACACACGGCCTGCAGCCGACGCGAGATCAACTCAAGCCACGGACCGAAGCGACACGAAACGCCGTggcgaatattaaaaatgaactaCAGCAGGACCAGCATCAGGATGAACTGTACACGCAAATGGAACAAATACACAATTCACCAGCGACACAAGAAGTTATTCAATACTCACAACAATATTCGACGCAGCtgccgcaacaacaaaaaccaaagcaaaaacaacagcaacactatTTGCCGctgcaaaatcaacaacaactctTCCAGCAACAGTTGGTGCAACAAatccaacagcaacaagagcTGCGTCAACAACGACGACAGATCGAAGAGCAAAATCAATTCGAACAACAATTACTAATCGAGCAACGACATCTTGAGAAGCGACAATTGGCGCAACAGCGGCAATTAgcgcaacaacagaaacaacaggAGAAACAAGAGCAAAAACTACTGCTGCAGCAACAGTTGAATTTGGCAAACGTAATCAGTACGGCCGCTGTCGATGCAGACGATACTGCCGGGGACGAAGCGCTGCCAGAAATCGCTTCGGATTTGCCGGATTTTAGCAGCGACTTTAACATGGCCAACGAGATGAGTGTCGGCAATGAATTTATCGTTATGGCCGATGGCACTGTCGAGGAGGTCATGGGCAATGGTGTTGTCATTGAGTACATTAATGCTGCCGCCGATGATGTTACGCTCGAAAACGGTTTGGTTCTCAACGATCTCGTTCAAGTCGAACAGCCGAACGATGACGTCGGTAGCGGCATTATAAATATGGATGTCGATGATATCATAATCGAGGAAAATGTTATGACGACGGATATTATTGCGGATACCATCAACGTTGAAGAGACAATATCGCCGCCGTTTCCGCAACCGCCCGTTCAAAATGctaaaagaattaaatgtaaaatatgcgCTTTATTCTTTGCCACACAGGAGAAGCTCAAAACGCACATGCTGACTCATAATGAAATTCCACATTTCTTTTGTGATCAATGCCCATTCTATACGTTCTACAAAATCGATCTGACGCAGCACTACAAAACGAAACACAAACTGGAGCCAACCAACAAACAGCTGCAGccgaaaaacaaattcaagcCGCTGGAGGATAATAAACCGCTTTACACGTGCGACTTGTGTCTGTACGAGACCGgcattaaattcaatttacgcAAACACTATATGAATAAACATCAAGTGGAGGCGACAGATGTGCAGCTGCGACCCGCCATTGTAAATAATTCCATTGATGCGAGTGATGGGTCTCTGGTCGGAATgcgaaatatcaaaaatgtcCGCGTCCTGCGTCCCGACTATCCCAACGGATTACAGTGTAAAAAATGTAGCAAGGTATTTTATTGGCGCACCAAACTCAAAGACCACTACAAGCGACACAATATCGAAGAGACCGCAGCGGAGGCGCTTAAATTGGTCGCATCATTATCGCCGACGGATAGTCTGCGACTACCGTCATCATCGTTGACAACATCGTTGCccgtagcagcagcagcaacaacaaccacaactacaacagcagcGGCCGGCATTTCTGCCTGTGATTTGATGGACATTGATACGACAATTGCAGTCACGCACACTACCAACACCACCAACAGCCTCCCGCCCGCCGTCGTAAATATTCCTGTTTATAGCGTACCATTGGATGCCATACCGCAAGTGGTCGAAACTGATCCGACCATAGATAATGacattgattttgattttaatggtGATGGCCTCTTCGAAGAtttcgatgatgatgatgacaacGATAACGCCGAGGATAACGACGAATTCCAAGACTTGCTGTTGACCAGCGAAGATGATTTCGAAGATTTGTTAGAAGAGCAGAGCAACGATAGTGCGACAAACAATACGCAACGCCCATTTTGTATGCACTGCAATAAAAAGTTCTTTTCGCAATATCAATTCGAGAATCATATGTTCGTGCATAGAGgtCTCGCGCCATATCGCTGTGAAATGTGCACCAATTTGTATAATACCAAACGCGCGCTAATCCGCCACTACAAGGCGGTGCATAAGAAAATACCCACGCGTGACATGATACAGGCGAAGGGCGATATACtggCTGTCGATCGAACACCAGTCGAGCATTTGAATCTGGAACAACAGAAGGcgTTGACTTTAATGTGCGCCAAGTGTCCTTATGAGTCAACGGAGctgcaaaatttgcaaatccATTTAAGTACAAGTCATGGCGTAAATGATGaGAACTTTATACTCCAAAAACTGCCCTTCGAGTGTCCGCGTTGCATACGTTCCTATGCCACAAAATCACGTTTGATTAGGCATTTAGAACGTAGCCACTCGGTGGCGACAATCATACAACATcgccaacaccaacaacaacaacaacaacaaaatgaacaacaacacgcCATCACGCCTATGCCTCCTCAATCAACCGTGCGAAGTACTAATTTCAGATGTGcaacagcaacacgcAAAAACATTGTCGAACAATTAAGAGCAGGAGAAAATATATCGAATGAGGAAGACGACAATCagtttttgcaaattgcaaCCGAaatgacaacagcaacaacaacagcaacatcgtcaccaactgcagcagcagcaatagaaATAGCAGTAAATGTTACATTTACTGATCCAATTCTACCACCAACTACACATGTACCTTTAGACGATTATAGCTTCACATTAGCAGCCGCCCCCGATCCAGTGGTGGCTGAAGAGTttacaccaccaccaccaccaccacgtACGCCATCGCCACCGCAGTCGACGCCACTACAGTCAGCTACTTATCAATGTCAAACGTGCCACACTTTTAGTTGCGATACACTCGAAGCGCTCGATGAGCACAGTAAAATTCTGCATGCCGATGACGATCAGCGCgaacatttcaatttcaaatgtgACATCTGCAATTGTAAATACAAGTCGTATTTGTTGCTCAAGCATCATCTAAAGCGGCATATTGCGCGTAAATATTGTTGCGCACAATGCCCGAAAACGTACATCAATCGCAGCGAACTGGAAATGCACAAGCTGCTGCATTCGGGCATTATGCCGCACAAGTGCGATTTGTGCGAAAAACAGTTTCGTTATTCGCATCATTTGAAACGACATCGTGATGTTGCACACTTTGGAAAACGCGTCTGCTGTCCTGTGCCTGAATGTGGGCGAATATTTACAACGCTCGCCCAGCTGAATATACATTCGTGGAATCATACGGGCAAGACGCCATATCGATGCAATCACTGCGGcaactatttcaaaaaacgAGAACTGTAA
Protein Sequence: MQQEVGAVVAAAATTPSKTVDFSFRLVCRTCLAADTEFYKLEAPIANDTTEKLSFSDCLRYCTTSHLDVDETPAQFPIYICIECSAALQVAYNFIRNAIAAHEILRQKLCATLSPQRRNGGLQKVSGGIGATSKWAASIYSVEDDSAAGSTGRVIDRGGGESEGGGTDDVVLVVPEQLRPMRYRCKICGEKVETKKSLKEHVKFHLDIISYCCQLCKFESKKRSHLSDHYSITHGLQPTRDQLKPRTEATRNAVANIKNELQQDQHQDELYTQMEQIHNSPATQEVIQYSQQYSTQLPQQQKPKQKQQQHYLPLQNQQQLFQQQLVQQIQQQQELRQQRRQIEEQNQFEQQLLIEQRHLEKRQLAQQRQLAQQQKQQEKQEQKLLLQQQLNLANVISTAAVDADDTAGDEALPEIASDLPDFSSDFNMANEMSVGNEFIVMADGTVEEVMGNGVVIEYINAAADDVTLENGLVLNDLVQVEQPNDDVGSGIINMDVDDIIIEENVMTTDIIADTINVEETISPPFPQPPVQNAKRIKCKICALFFATQEKLKTHMLTHNEIPHFFCDQCPFYTFYKIDLTQHYKTKHKLEPTNKQLQPKNKFKPLEDNKPLYTCDLCLYETGIKFNLRKHYMNKHQVEATDVQLRPAIVNNSIDASDGSLVGMRNIKNVRVLRPDYPNGLQCKKCSKVFYWRTKLKDHYKRHNIEETAAEALKLVASLSPTDSLRLPSSSLTTSLPVAAAATTTTTTTAAAGISACDLMDIDTTIAVTHTTNTTNSLPPAVVNIPVYSVPLDAIPQVVETDPTIDNDIDFDFNGDGLFEDFDDDDDNDNAEDNDEFQDLLLTSEDDFEDLLEEQSNDSATNNTQRPFCMHCNKKFFSQYQFENHMFVHRGLAPYRCEMCTNLYNTKRALIRHYKAVHKKIPTRDMIQAKGDILAVDRTPVEHLNLEQQKALTLMCAKCPYESTELQNLQIHLSTSHGVNDENFILQKLPFECPRCIRSYATKSRLIRHLERSHSVATIIQHRQHQQQQQQQNEQQHAITPMPPQSTVRSTNFRCATATRKNIVEQLRAGENISNEEDDNQFLQIATEMTTATTTATSSPTAAAAIEIAVNVTFTDPILPPTTHVPLDDYSFTLAAAPDPVVAEEFTPPPPPPRTPSPPQSTPLQSATYQCQTCHTFSCDTLEALDEHSKILHADDDQREHFNFKCDICNCKYKSYLLLKHHLKRHIARKYCCAQCPKTYINRSELEMHKLLHSGIMPHKCDLCEKQFRYSHHLKRHRDVAHFGKRVCCPVPECGRIFTTLAQLNIHSWNHTGKTPYRCNHCGNYFKKREL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -