Svar010730.1
Basic Information
- Insect
- Suillia variegata
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_949127995.1
- Location
- OX421844.1:84885-88971[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.067 1.6e+03 -0.8 1.3 60 113 39 89 27 119 0.42 2 3 0.11 2.8e+03 -1.6 0.5 67 98 322 352 298 378 0.43 3 3 1.9e-96 4.5e-92 308.3 7.5 2 217 475 676 474 677 0.92
Sequence Information
- Coding Sequence
- atgtTTAGACCAATCAAGAATTTAATAACTTACATACAAAAGAATGCCAGCGGCAGTGCGATATTCGGCGGAACTGCAGCAGTAGCCGAACCAGAACCAGAAGCTGAGGCAAGCGAAGAAGCACAAGAGAAACGTTCGACGGAAACGCACTACGAGATACAGCACAATAACGACGTGAAAGCGGAAAAAATGGATAAAATTAATCCTAAAGATTCGACAGAGGCAATCACTGCCGCCACATACGATGCGGAGGATGATTTTGAATTGCAAATTAAGAGTATTATGCTAAAGAAACCActggcaacagcaacaaaaacagaggACACTATCGCTAATGGCAGTGCGTCCGTTTCGTCCGTGGTCGACCAAAACACACCGCACATTACGCGGAGCATTGTATCCGCTGCTCCTCACGCTGATGAACACAATCAAAGTTTTGATGATGAACTGGAGGACTTTCGGCATGATCCCACCGCACATTTGGTGGTCGATGATTTTTGTTCGATAGGCAGTGCAGCACCAACTGTGACAGAGGACGGTGAGGACACTGCCGAGGAATTTAATACCGAAGAAGATGAAGGTGTCGAAGAacctttttctgttttagcCCAGGAAATTGAATCGTTTGcagacCGTGAAATAATTGTGCTTAATGATGCGGAGCTAAATTCATCCATTGCATCGGATGCACTTTCTGAAGACCCTTTGGCAATTGATGATCTGACACAGCCATCAAGGCTTAGCGATTTCAGCGCTAATCCACTTGATTCATCGGCTTCGACCAACGACGAAGAGGCTTCTACAAGCCAAGATCTGGTTTGGTTAAATATGGGCAGCAGCGGTGGAGCAATTGGCGGAGCACCAAAAGAAGCTGGCGATAATAACATTGATGGTGTCAAGAAATCGATGACATCGCTTGCAATGACAACTCCAAGAACTGTTGAAAAAGACGAGAACACACTACAAAAATCGGCATTGCATGGAAAGGCAGCTGCAGCTGCCTCCAACGATGTAAACGATAGGTctgaacacaacaaaaacgaggAACAAGCAGAGGAGTTGCGTAGCGATGGCTCAGATTCAGGTTTGGGTAGTGAAACGTCCGCGCTGCAAATTACGCTCAACAGTGGCACTGATACAAGTGAAGTGATTAGTGTCTGCAACACTCCCACATCGGCACAAACGCCTACGATACaggaaaaagcgaaaaatgcGGTCAACTCTTCACTGATTTCTGCGCCAGGCGAAACAACTGCCCTCGCTAAGCCGCCTCTGCGCTCCAATTTAAAACGTCGACTCGTTGAGATCGAAGCGGACGATGTGGAGGAGCTTAACAGCTGCGTTCTTAATGCCGCAGTTGTCTCTGCCTCATCCTCTGTCACTTCTTCGACTGCAGCAATTGTCGCTTCACAGCAAAAGAAACTGAAGCGTTCTATAAACTTTGATAACGTTCAAGTTTACTATTTTCCCCGGCAGCAGGGTTTCGGCTGTGTGCCCTCCGCCGGTGGTTGTACACTAGGCATGGCTGCGCATCATGTTGCCTTTAAGACGCTCACGCTGGCAGAACATGCTGCTGAGCTGCGTCGCGCTCATCGCTTACAGCTGCAGGAGATCAATCCGCGTGGCTCTTCAAGCGATGATAGCGAAGAATCGGAAGAGGACTATTTAAGCGAAGGCAGCGGTTCCGATTTGGACGCCGAGTCGAATGGATTTCTGCAACCAGTGTCTCCAAAACAGCGTCGTGCGTTGTTGAAAGCTGCCGGCGTACGTAAAATTGATGCGAGTGAAAAGGTCGAGTGCCGCGATATTCGTAATTCGCGCGAAGTTTGTGGCTGTACATGCCGAGATTTTTGCGATCCGGAGACGTGCGCTTGCAGTCAGGCGGGCATCAAGTGTCAGGTCGATCGCGCTATGTTTCCTTGCGGATGTTCGCGCGACGCTTGCGGAAATTCCGTTGGTCGCGTAGAATTCAATCCGGCTCGCGTGCGCACTCACTTTATACACACAATCATGCGTCTGGAAATGGAAAGTCGTCAGCAACCAAATCGTCCACTTAACAGTGGCAACGGCGGTGGTATGATTTATGGTATGGCAACTAGTATTTCAACCTCCTCATCCGCCGTCGCAGGAAGTGCTTCATCAGCAACAGCTGCCCACTACTATGGCAGCAGTTTACAACCACAATCGAATTACAGCTCGGGCTACGCTTCTCCCGCCTACACAAATGAACTTCAAACCTCAGTAGGCAATGGCGTTGGCGGTGGTTACTATCAACCTCAGTCGGCGACAGCTGCGAGTTACGGCGTCGGTGGTGTACCCAGTATGTCTACTGTTGATATGCACACAACGCCACCACAATATCAACTTGACAGTTTGGATTCGAACCTGTTTTCGGGTTCCGCCACGGCAACACCTTCATACGGCGAACTTATGCCGACCTATAGTAACGTCAGCACGGCCACCTCGCCCGGATCCTTTCACAATTTGAACTATGCCACGATTGGCAGTGGCTTGCAGACACAGGTATCCGCATACTCTTCTTACCATCACCACCAAACAACAGCCGCAGCTTCCACACCCAGCAGCTATCTTCCGCAAAGCCATAGCAGTGCAATTATACCGCCAGCTAGCACATACAGTTCGTGTGCAGTGCCCTCAGTACCGCCCTATGGTACTGCAACTACGACCGCTGCCGCACCACTATATCACAACATTGCACTTGAAACTACCACCGCACCAAGCGCCTCCACAACTACCATCGATGGTGGCATCGACGTCAGCGTAGACGACAGTAGCTTCATCAGTCTAAACACGCCGATTGTCAGCTCATCGCGGCTATCACAAATTAACGATCTTCTACAACACAATCGCAACACAACCGCCGCTTTGGTTGCGGTTACCCAATGTCCAAACGCCAGCCCAATGCGTGTCAATGCACCAGCAAccacatcatcatcatcggcCTCCATCGATACGCCGCCCATTGATGATGCACACAAAAGCTGTTTGGCTTTCGAGGAACTGTCGCCGCCTCTAAATCCAATGCCCATTGTGGCCGTTATGGAGACTGCGACTAACAAAACTTCACTATCGCAAAATGAACCTTCACCTTGTGTCGCGGCGGTCGTTAATAATGTAGCGCTGATTAGTGCATTCACAGCCGCCGCCTCGACAAACAATTGA
- Protein Sequence
- MFRPIKNLITYIQKNASGSAIFGGTAAVAEPEPEAEASEEAQEKRSTETHYEIQHNNDVKAEKMDKINPKDSTEAITAATYDAEDDFELQIKSIMLKKPLATATKTEDTIANGSASVSSVVDQNTPHITRSIVSAAPHADEHNQSFDDELEDFRHDPTAHLVVDDFCSIGSAAPTVTEDGEDTAEEFNTEEDEGVEEPFSVLAQEIESFADREIIVLNDAELNSSIASDALSEDPLAIDDLTQPSRLSDFSANPLDSSASTNDEEASTSQDLVWLNMGSSGGAIGGAPKEAGDNNIDGVKKSMTSLAMTTPRTVEKDENTLQKSALHGKAAAAASNDVNDRSEHNKNEEQAEELRSDGSDSGLGSETSALQITLNSGTDTSEVISVCNTPTSAQTPTIQEKAKNAVNSSLISAPGETTALAKPPLRSNLKRRLVEIEADDVEELNSCVLNAAVVSASSSVTSSTAAIVASQQKKLKRSINFDNVQVYYFPRQQGFGCVPSAGGCTLGMAAHHVAFKTLTLAEHAAELRRAHRLQLQEINPRGSSSDDSEESEEDYLSEGSGSDLDAESNGFLQPVSPKQRRALLKAAGVRKIDASEKVECRDIRNSREVCGCTCRDFCDPETCACSQAGIKCQVDRAMFPCGCSRDACGNSVGRVEFNPARVRTHFIHTIMRLEMESRQQPNRPLNSGNGGGMIYGMATSISTSSSAVAGSASSATAAHYYGSSLQPQSNYSSGYASPAYTNELQTSVGNGVGGGYYQPQSATAASYGVGGVPSMSTVDMHTTPPQYQLDSLDSNLFSGSATATPSYGELMPTYSNVSTATSPGSFHNLNYATIGSGLQTQVSAYSSYHHHQTTAAASTPSSYLPQSHSSAIIPPASTYSSCAVPSVPPYGTATTTAAAPLYHNIALETTTAPSASTTTIDGGIDVSVDDSSFISLNTPIVSSSRLSQINDLLQHNRNTTAALVAVTQCPNASPMRVNAPATTSSSSASIDTPPIDDAHKSCLAFEELSPPLNPMPIVAVMETATNKTSLSQNEPSPCVAAVVNNVALISAFTAAASTNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -