Svar009801.1
Basic Information
- Insect
- Suillia variegata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949127995.1
- Location
- OX421843.1:44673859-44691128[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-15 4.8e-12 45.8 0.0 2 45 379 423 378 423 0.96 2 2 1.5e-18 2.8e-15 56.2 0.0 1 43 936 979 936 981 0.95
Sequence Information
- Coding Sequence
- ATGCGTGCGGAAGCACTCGCCTCGCCTCTCCGTTCCTGCTTAGAACGGGTCGCTGAGGAGTTGATGGGGCGCAGGAAATGGAAGCATTATCAAGAAGCAGCATTATCATCGCGAACCCACTTAAGTACAGAACAATTACTTGCATCTATAGAACTACTCAATATCGAAGAACAGAAGAGCGGCGAACACGACGATCCTCCTTTCAAACTGGACAGGAACATTTTGAGCTTTTCCAAAGcagaacagcaacagcagcagcaaccttACGAAGAAAACCACCGCCAAACGGAAGAAAAAAACggagaacaacagcaacgacgacGGGAAAACAACAATCAACATCATCACAATCGCaaaagcgacgacgacgatttAACGGTTAaactaaaaacacaaaaggatACAAAAGCAGAGCTTTTAAAGGAAAAAGacgtcgccgccgccacatCGGTTAAGGTCCCATTCATAGCCGATAACGAAGCTGACGACCCACCAACACCAGAACCCATCGACTGGAAGCCGAATGATAAGTGTTACTTTTGCGTGGACGGAAAACTGCTCACAGTGAACGCCAAAGGTGATTTGGTGGCCGAATCGGGCCCGGCCGCGCCGTCGTCGTCCGAGACGGACCACGTTCAGCGCcttGACTCCGACAGTGATTCAAACGAATCATCAACATTAGCAAGCGTCGGTGGAGGAGCTGGCTCTTTAACCGACAATAATCGTATTAATCTGAATCTACTAACATCACGTCTCAGAGATTTGCCAGGGAATATGACCTCAATGGATTCGATGGCCGCGCGTTTAGCTGCAATACAAACGATATCGGAACAAATATACCCAAatTTCAACTGGCTGCAATtggcgcagcagcagcagcaacaacaacagcaacagcagcagcagcaacaacaacaaacaaattcggCCACACCAACTACCTCAGATACATCGGCCGCCGCTGTCAGTCCTTCACTAAAGGATTCACCCAGTCCCAGTGATGCAACCGGTGAACAACCGTTAGATCTTAGTTCCAAACCTTCACCAAATTCATCCATAAGCGGGGACTTAAAATCAGTGCGGACAAAATCCTCGCGTGCCACACCAATACCCACAGCACGTCGCACTTACAGCGATGAGGATCTGAATAACGCATTGCAAGACATCCTTAGCGGCAAGCTAGGCACACGCAAGGCCGCGGTGCAGTATAGTGTACCGCGCTCTACGCTGCGCAACAAAGTCTACAAACTGACTTTAGAGGCAAAGCGTGGAAATGCTCAGACACCGGCCGAACTTCTGCAGCTGCAACAAGAGCTCGAATTGGACAAGGATTTGTCCGGCGACGAGGGTGACGACAGTAGCGCTTCGACGCCACAGCCACCAGATGTGCAACAGCAACCAACGCTCGATGACCTTGCCAGCCGAATTGCAGCATCAGCCACGCTGCGGAAACTGTGCGAAAacaatggcggcggcggcggcgaggTAGGCGATGCAAGGGGTCCGAATGCATCGTCGCCAAAGTTAAATTCCGCAGATGTCAGTGGCAAGCGGCAAGGCGGCACACCGTTAAGCACGGTCGGACAACATCTGCTGCCGCAGTCTTCGCCGCAACCGCAGCCCGCACCACTATTTATCGATTCGAATGTGCTGTTGCAGACGTTGCTAATGGGCGCATTACATCCGAAACTCGATGAGACGGTAACACTGCGGGATCTTTTCAGCGCAATTCTTTTGAATTCAGGCACCAATCTAAAGGATGCGTTGACTGTGGTAACGACTGGCGCTGACGCTACCACTGGCACACCACTCAATAACGGCAAACCAAATTTGATCGATCCGCGACTGTTGCTGCAgcagttgcaacaacaacatcagcagcaacagcagcaacaacagcagcagcatacgTCACAGTTTCAACACCGCCTACCAAAATCAGAAACTCCCGAGACAACTTCGTCGCTGGACGCAAGCGAGGCGTGTGACGATCCATCGACGATACTGAAAATTCCGTCCTACAAGCCCGTGGCAGGGACTTCCAGCTCCTCGACTGGCGGCGCACGATCCTCCGGATCTCCTACGCTAATGTGCGGCAtcggcagtagcagcaacaacaataacaatagcagTAGTAGCAACAATAATACCACCAACATCAATTCCAATCGCAACGGCGATAGTCCGCATTCGCCGCACCTTGCCACGTCCATGCTGGCCGCAGCAGTCGCAGCTGCGGCTAACAATAACTCAGCTGTGAATCGTCATgtcggcagcagcaacaacaacatgtccGTCATCTCACCGCCACTGCTCCACCACCATCAGCACCACCAACACCATCAGCACAATCTCAGTCGCACCGCAGACTCACAGTCGCCGCCTTCACTGACACTGCGCGATGTCATGACCAACAGCATCCACCGCACCATGAACGAGCTGGCTAGCAAAGATGCCGCACATGCCGCAGCAACAGCTTCAGATCGCAACTCCGGCGTGGGATCAGACTACAAAAAACCTAGCATTTCCGTGGTAAAGAACATTGGCGGCACGGATACCTCACGCTTTGGTGCCGCACCCAACTTACTTGCTGCCGTCAGCGGCACTGCCGTCGGTGGTGGTGGCCCACACAATTCACATCACCATCACCAACAGCCGCACCCATCACACCTGCAACACGCCGCCGCCCACCATGCCCATCACCACCATCATCACCACTCGTCGCATCACCTAAGTCGACAAGAAGCAGCGGCCCTAGCCGCAGGCAAAGGCACACGACCTAAACGCGGAAAATACCGCAATTACGACCGCGACAGTCTCGTCGAAGCAGTGAAGGCAGTGCAACGTGGTGAGATGTCTGTGCACCGTGCGGGCAGCTACTACGGCGTGCCGCATTCAACGCTCGAGTATAAAGTAAAAGAGCGACATTTGATGCGTCCGCGTAAACGCGAACCAAAGCCACAACCCGGTTTAGACGGCAGCACTAGCGCCGCTACGTCAAAAACCAATTCCGGCGCAAACATTCCAGGCCTACAGAATAGCCTCGACAAGTTGAAGGCCGGTGCGGGCGGCAGTAACTCCAAGCTTGGTAGCGGTGCagccaaaaacaataacaacaacaacagcgctgCAGCCTTCCCTCAATCGGGTGGTGCCAATGGCATGAAACTGCCAATATTTGATCCAGCGGTAGCGGCACAACTACAATATCCACCGCATCTCTTCTGGCAACATTCGCCAGCGGCGGCATTCAGCCAATTGCAAATCGATTTTAACCgcaatgcagcagcagcacaaggtGGCGCTACGAGCAGTGTCAACGCAGACCTCAAGTCACGCATTCAGCGATATCAAGAGGACGCGTTGCGCGCTGGTAGCAACAGCAATCAACAAGCCAATAGCCCCAGTCCCATTGCCAGTCCAATGTCGGGCGGACCACCGCATGCCGCGCTTAGCATCAAGAGTGCACGCGAACTAGCCGAGAATTTGTACGAGAGTGGCGGCACAGCTAATGGCGCAGCATCTTTTCTCGACGGTATCATTCGCCAGACGCTCGATCGCAAAAGCGATCGTGATGTtgtgccgccaccgccacctaCCGGTGGAGCACTGCTTGATCAGCTGCTGGTAAAGAAAACTCCGCTGCCGTTTACTAACAATCGCAGCAATGAGTACGCCGCGCCTTCATCCTCCGCCACAGCATTGACGGCAGCGGCGCTGGCAGCAACAAAACGAAGTGCCAGTCCGCTAGCCTTCACGGATATTAAGCGTGAACGAACGAGTCCCGCTCCACCGCATAGTAGTGGCGATTGCAGTGCCAGTGAAGATGATGACGCCTCACAAAGCGGCGGCGAAGACGCGCTCgagcataacaacaacaatagcaccAGCAGCAAGCATAACCTTAGCGGCAACGGTGGGCTGAATATGTTGGCGACGACGGATCTCCATCACCATCAAcggcaacaacatcaacagcgcAGCCGTATGACATCGCGCGACTCTGAAACGGACGCGAGCAGCATTAAAAGTGAGCGACTTTTGCATGCGGCGGCGTCGCATcagaactacaacaacaacagcagcagtggTTGCAACAAAATGTCAGACCTGAACGGTGTAGTCGGCAGTGCACTCGAATCGTCAACGGCATGCGGCAGCACATCAATACTGCACGAGAAACTGGCACAGATCAAGGCGGAGCAGGAGCGCGAAGAGAACTTATAG
- Protein Sequence
- MRAEALASPLRSCLERVAEELMGRRKWKHYQEAALSSRTHLSTEQLLASIELLNIEEQKSGEHDDPPFKLDRNILSFSKAEQQQQQQPYEENHRQTEEKNGEQQQRRRENNNQHHHNRKSDDDDLTVKLKTQKDTKAELLKEKDVAAATSVKVPFIADNEADDPPTPEPIDWKPNDKCYFCVDGKLLTVNAKGDLVAESGPAAPSSSETDHVQRLDSDSDSNESSTLASVGGGAGSLTDNNRINLNLLTSRLRDLPGNMTSMDSMAARLAAIQTISEQIYPNFNWLQLAQQQQQQQQQQQQQQQQQTNSATPTTSDTSAAAVSPSLKDSPSPSDATGEQPLDLSSKPSPNSSISGDLKSVRTKSSRATPIPTARRTYSDEDLNNALQDILSGKLGTRKAAVQYSVPRSTLRNKVYKLTLEAKRGNAQTPAELLQLQQELELDKDLSGDEGDDSSASTPQPPDVQQQPTLDDLASRIAASATLRKLCENNGGGGGEVGDARGPNASSPKLNSADVSGKRQGGTPLSTVGQHLLPQSSPQPQPAPLFIDSNVLLQTLLMGALHPKLDETVTLRDLFSAILLNSGTNLKDALTVVTTGADATTGTPLNNGKPNLIDPRLLLQQLQQQHQQQQQQQQQQHTSQFQHRLPKSETPETTSSLDASEACDDPSTILKIPSYKPVAGTSSSSTGGARSSGSPTLMCGIGSSSNNNNNSSSSNNNTTNINSNRNGDSPHSPHLATSMLAAAVAAAANNNSAVNRHVGSSNNNMSVISPPLLHHHQHHQHHQHNLSRTADSQSPPSLTLRDVMTNSIHRTMNELASKDAAHAAATASDRNSGVGSDYKKPSISVVKNIGGTDTSRFGAAPNLLAAVSGTAVGGGGPHNSHHHHQQPHPSHLQHAAAHHAHHHHHHHSSHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGSTSAATSKTNSGANIPGLQNSLDKLKAGAGGSNSKLGSGAAKNNNNNNSAAAFPQSGGANGMKLPIFDPAVAAQLQYPPHLFWQHSPAAAFSQLQIDFNRNAAAAQGGATSSVNADLKSRIQRYQEDALRAGSNSNQQANSPSPIASPMSGGPPHAALSIKSARELAENLYESGGTANGAASFLDGIIRQTLDRKSDRDVVPPPPPTGGALLDQLLVKKTPLPFTNNRSNEYAAPSSSATALTAAALAATKRSASPLAFTDIKRERTSPAPPHSSGDCSASEDDDASQSGGEDALEHNNNNSTSSKHNLSGNGGLNMLATTDLHHHQRQQHQQRSRMTSRDSETDASSIKSERLLHAAASHQNYNNNSSSGCNKMSDLNGVVGSALESSTACGSTSILHEKLAQIKAEQEREENL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -