Basic Information

Gene Symbol
Xbp1
Assembly
GCA_949127995.1
Location
OX421842.1:15149504-15151430[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.2e-15 8.4e-12 45.3 8.5 2 53 87 138 87 143 0.93
2 3 2.6e-06 0.003 17.9 5.1 24 65 123 164 120 164 0.94
3 3 1.2 1.4e+03 -0.3 9.9 25 60 145 180 144 192 0.78

Sequence Information

Coding Sequence
atggcaACGGCTACAAGCGGATCGGCTGTTTTTATCACAGTGCCCAAATATGTGGCCATTACGCCCAGCCCTGCATCGCCGGCCTCCTCAGTGCCGTCAGGAGCGCTGACCCGCATCAGACCACTGATCAGTGTCGCGGCGGCACCAGCCTCGCCTGCCAGCAGCTCTGGTTATGCCTCGAGCGGCGGTGGTTGTGGCGCTGACGAGGGTAGTGGCGCACCCAAAGGCAAGAAACGTCGTCTCGACCATTTGACATGGGAGgagaaaattcaaagaaaaaaactaaaaaatcgcGTCGCTGCGCAAACTTCACGGGATCGCAAAAAAGCACGCATGGAGGAAATGGAAGGCGAAATCGATGCGCTCAACGAACGCACCGAAATACTACAAAACAAATGCGAAAGTCTGCAAACAATCAACGATTCGCTTCTCGAAAAGAACCAGAAACTCGACATGGAAGTAGAAATCTTACGACAGCAACTCACCGagttgcaacagcaacagcagcagcaacaacaaaaacaaaatgctttaaaagcAGCAGCGTCAAATCAACAGCAATCAGTTGAGACTTGTGCCGGCTGTGAGTCCATCCTAAACGGATCTGCAGTATCCAATACTGACCCTCTGCCGCAGGGCTCAACACAAACGGACTCACAGTCGACACGAGACCAACTGAAGCGAACGACGACGCTCGCAACGCTTTGGCGAATTGTTGCACTCTGCCTACTCTACAAGACATGCAACTCCTCCTCCAAGATGTCAATGTCGAGGGCAACCAAGTCGATGACGACGACACACTGCTCTTCGATGCGGGCAAATTGGAGGAGCTCGCCGAAAGTCTGCTCGCCGATATCACAGCAGACCTGGAAGCAGGCGATCGAACGTGCGATGCGTCTGCTGCCGAAATTGCAAGCGCAGCAGAGCGACTGTCTGGATCAGTGGTGGGGACCACAACAGAACGGCTGGAATCCGGCATTCATAGCACCACAACATCAACAGAAGATGACATCAGCATAA
Protein Sequence
MATATSGSAVFITVPKYVAITPSPASPASSVPSGALTRIRPLISVAAAPASPASSSGYASSGGGCGADEGSGAPKGKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKKARMEEMEGEIDALNERTEILQNKCESLQTINDSLLEKNQKLDMEVEILRQQLTELQQQQQQQQQKQNALKAAASNQQQSVETCAGCESILNGSAVSNTDPLPQGSTQTDSQSTRDQLKRTTTLATLWRIVALCLLYKTCNSSSKMSMSRATKSMTTTHCSSMRANWRSSPKVCSPISQQTWKQAIERAMRLLPKLQAQQSDCLDQWWGPQQNGWNPAFIAPQHQQKMTSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-