Svar001193.1
Basic Information
- Insect
- Suillia variegata
- Gene Symbol
- Xbp1
- Assembly
- GCA_949127995.1
- Location
- OX421842.1:15149504-15151430[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.2e-15 8.4e-12 45.3 8.5 2 53 87 138 87 143 0.93 2 3 2.6e-06 0.003 17.9 5.1 24 65 123 164 120 164 0.94 3 3 1.2 1.4e+03 -0.3 9.9 25 60 145 180 144 192 0.78
Sequence Information
- Coding Sequence
- atggcaACGGCTACAAGCGGATCGGCTGTTTTTATCACAGTGCCCAAATATGTGGCCATTACGCCCAGCCCTGCATCGCCGGCCTCCTCAGTGCCGTCAGGAGCGCTGACCCGCATCAGACCACTGATCAGTGTCGCGGCGGCACCAGCCTCGCCTGCCAGCAGCTCTGGTTATGCCTCGAGCGGCGGTGGTTGTGGCGCTGACGAGGGTAGTGGCGCACCCAAAGGCAAGAAACGTCGTCTCGACCATTTGACATGGGAGgagaaaattcaaagaaaaaaactaaaaaatcgcGTCGCTGCGCAAACTTCACGGGATCGCAAAAAAGCACGCATGGAGGAAATGGAAGGCGAAATCGATGCGCTCAACGAACGCACCGAAATACTACAAAACAAATGCGAAAGTCTGCAAACAATCAACGATTCGCTTCTCGAAAAGAACCAGAAACTCGACATGGAAGTAGAAATCTTACGACAGCAACTCACCGagttgcaacagcaacagcagcagcaacaacaaaaacaaaatgctttaaaagcAGCAGCGTCAAATCAACAGCAATCAGTTGAGACTTGTGCCGGCTGTGAGTCCATCCTAAACGGATCTGCAGTATCCAATACTGACCCTCTGCCGCAGGGCTCAACACAAACGGACTCACAGTCGACACGAGACCAACTGAAGCGAACGACGACGCTCGCAACGCTTTGGCGAATTGTTGCACTCTGCCTACTCTACAAGACATGCAACTCCTCCTCCAAGATGTCAATGTCGAGGGCAACCAAGTCGATGACGACGACACACTGCTCTTCGATGCGGGCAAATTGGAGGAGCTCGCCGAAAGTCTGCTCGCCGATATCACAGCAGACCTGGAAGCAGGCGATCGAACGTGCGATGCGTCTGCTGCCGAAATTGCAAGCGCAGCAGAGCGACTGTCTGGATCAGTGGTGGGGACCACAACAGAACGGCTGGAATCCGGCATTCATAGCACCACAACATCAACAGAAGATGACATCAGCATAA
- Protein Sequence
- MATATSGSAVFITVPKYVAITPSPASPASSVPSGALTRIRPLISVAAAPASPASSSGYASSGGGCGADEGSGAPKGKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKKARMEEMEGEIDALNERTEILQNKCESLQTINDSLLEKNQKLDMEVEILRQQLTELQQQQQQQQQKQNALKAAASNQQQSVETCAGCESILNGSAVSNTDPLPQGSTQTDSQSTRDQLKRTTTLATLWRIVALCLLYKTCNSSSKMSMSRATKSMTTTHCSSMRANWRSSPKVCSPISQQTWKQAIERAMRLLPKLQAQQSDCLDQWWGPQQNGWNPAFIAPQHQQKMTSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -