Basic Information

Insect: Subacronicta megacephala
Gene Symbol: -
Assembly: GCA_958496365.1
Location: OY292543.1:5107510-5109849[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.069 63 4.4 3.7 18 43 9 31 6 37 0.87

2 18 1.7 1.6e+03 -0.1 1.5 18 43 37 59 32 60 0.80

3 18 0.0014 1.3 9.8 0.0 18 43 68 90 65 91 0.93

4 18 0.00026 0.24 12.1 0.3 17 43 98 121 95 122 0.91

5 18 0.0024 2.2 9.0 1.2 18 44 129 152 127 152 0.94

6 18 7.7e-05 0.07 13.8 1.8 14 43 156 182 153 183 0.89

7 18 0.0045 4.1 8.2 0.5 17 44 188 212 184 212 0.89

8 18 0.0064 5.8 7.7 0.3 18 44 220 243 214 243 0.87

9 18 2.7 2.4e+03 -0.7 0.0 19 44 256 278 254 278 0.64

10 18 0.085 77 4.1 0.6 13 43 298 325 285 326 0.80

11 18 0.79 7.2e+02 1.0 0.0 15 27 359 371 355 385 0.80

12 18 0.088 80 4.0 3.8 16 43 405 429 398 430 0.87

13 18 3.4 3.1e+03 -1.0 10.4 12 29 430 447 422 459 0.71

14 18 0.011 10 6.9 5.9 6 43 453 487 450 495 0.77

15 18 0.41 3.8e+02 1.9 2.8 18 44 494 517 490 517 0.83

16 18 0.62 5.7e+02 1.3 1.0 18 28 524 534 519 553 0.81

17 18 0.00017 0.15 12.8 3.2 10 43 610 642 605 643 0.76

18 18 0.32 2.9e+02 2.3 0.1 13 40 658 687 651 690 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.069	63	4.4	3.7	18	43	9	31	6	37	0.87
2	18	1.7	1.6e+03	-0.1	1.5	18	43	37	59	32	60	0.80
3	18	0.0014	1.3	9.8	0.0	18	43	68	90	65	91	0.93
4	18	0.00026	0.24	12.1	0.3	17	43	98	121	95	122	0.91
5	18	0.0024	2.2	9.0	1.2	18	44	129	152	127	152	0.94
6	18	7.7e-05	0.07	13.8	1.8	14	43	156	182	153	183	0.89
7	18	0.0045	4.1	8.2	0.5	17	44	188	212	184	212	0.89
8	18	0.0064	5.8	7.7	0.3	18	44	220	243	214	243	0.87
9	18	2.7	2.4e+03	-0.7	0.0	19	44	256	278	254	278	0.64
10	18	0.085	77	4.1	0.6	13	43	298	325	285	326	0.80
11	18	0.79	7.2e+02	1.0	0.0	15	27	359	371	355	385	0.80
12	18	0.088	80	4.0	3.8	16	43	405	429	398	430	0.87
13	18	3.4	3.1e+03	-1.0	10.4	12	29	430	447	422	459	0.71
14	18	0.011	10	6.9	5.9	6	43	453	487	450	495	0.77
15	18	0.41	3.8e+02	1.9	2.8	18	44	494	517	490	517	0.83
16	18	0.62	5.7e+02	1.3	1.0	18	28	524	534	519	553	0.81
17	18	0.00017	0.15	12.8	3.2	10	43	610	642	605	643	0.76
18	18	0.32	2.9e+02	2.3	0.1	13	40	658	687	651	690	0.87

Sequence Information

Coding Sequence: atgtttctgaACACCTTAGATTTTGTTTGCGATTACTGCTCAAGAACATTTACAAGAAAATGTAACTTGCAATCCCATATGGAAAACTATCATATTAACTTATCACGCCATTGCAATATTTGTGACCGAAGCTTTTGCAGTCCAACTAGTTTACAGCAGCATATAGCTCGTGGCCACAATAATTACGGCCAGCCGTTCCCAGAATGTGAATTATGCGGTCGTATATTtacaagaaaacaaaacattgtCTCTCATATGATCACTGCGCATCTtcaaggtcttgggttcgagatAAGATGTAAATTTTGTGACAAAACTTTCACTACAGATCGGAATTTGAAAAGACATGTTAATCAGCTGCATAATCCTGATGTCGAGTATCCAACATGCAATGATTGTCATAGGGTGTTCAAAGGGAAGCATTCGTTAATCGCTCATATACAGTCAGTACATAATATTAGTGAAAAAGAAGCAATAAAATGCCATTTATGTGAAAAAGTCTATACCAATAATAGAAACTTGAAGAGACATATTGAAATGTTTCATGGGGAGAGAGGGGAGTATAGATGTGATATCTGTCCCAAAGTGTACACGTCTAATCAAAGCTTACGACGTCATGCCAGAACTAGACATAGCACAGAGAATCAAGATCATTTGACCTGCGGCCTTTGTATGAAAGTCATCGTCGGCAGAGAGAATTTCGACAGTCACATACAGTTCCATCATCAAGACATCGAAATTGAGAATAAACCTCCAGGATTTGTTTGCGAGTCATGCGATAAAGTGTTTGATGAAGAGCCTTATTTACGCCAGCATGTTAAATCCGAACATTCATTCAAGACCTTTTATAAGTATTGTAAGAATTCGCTGCTGAAACAGTATGGACTTGATACGCACAATGTATACAACTGTGAGTATTGTGGTCAGTCTTTTCTAACGGTTTACGAGCTTAAAGATCATATGAGGGTCAACCATGACGCTGAGTACTCCCTTTCTACTTGCAATGTATGTTTTAGTAAGTTTTTCAGCAAGGAAACCATGTCAGCTcataaaaacatatgtttacCACCTCCAAACGTCAACTCTTGTAGTTACTGTGATAAATTATTTACGGATATATCAAGTTTAGAATTTCACACGCGAATTTTTCACCCACAAGCTCAAATTGCCGATTCGAATATAACATCAACGAATATAGACGATGAATCTGTTTCCTTTAAATGTGAACATTGTGATAGGATATACTATAGCGACCGATCTCTCAAACATCATATTAAGTTAAAACACACAACTGACGAAGAAGTAGAATGTCAAATATGTGGCAAAATATGCAGCAATAAATACTATTTAGCGTCTCATATAAAAATAGTTCATACTAATGACTCGTGGTCCAGGTGCGAGTATTGCGATAAACAGTTCAAATCCAAAAGAAATATTAGAAGACACATTGAATATACTCATTTAGGTATGCAAAGACATAAGTGTATAGAATGCGAGACGTTGTTTAAGGAAAAAAGGAGTTTGCGCAAGCATGTTAGGACAAAACATCCGAATTCTACTTCTTTTCCTCAGTGCCACTTTTGTCATAAACGCTTCGAATCGGCGAAGTCGTGTAAAATACATCTGAAGTTGTTACATTCGTTTAATATGAACACACACCCGTGCCACCTTTGCTCAGTCTCCTTTAGTTCAAACGAAGCATTAAACATTCATATAGAAACCAAACATTTAGCTGAAGATGAAATTTACAAATGCGAAGaatgtaatttagtttttagagGCCAGGAGAAATTCGACAGTCACAACGAAGTTTGTCATGTTAATTTAGTGTCGAATATAAAACAGAAAGTATTACCGCGATGCATTTTGTGTATGAAAGATTTTAGCTCTAGAAAAACTCTTAAACGTCACATAAAGAAATTCCACGAAGAGTTCGATGTGGACGAATTGGCGAATTTCGGTTCACGGCGTAGAACATTTAATGTTGAATGTGAAGATTGTATCAAAAACTTCAACGACGATTTTCATTTGAATGTATATAACAAGCTTAAACATTTGCGGGACTCGGAGATTTTTAAATGCGATGTTTGTTTAGTGTCATACAATTCATTAGAATATGCTATTCAGAGATATAAAGTAACAAACGCAGATGCTTGTAGGAGTAAAATGATTTTAAGTGAGCTTTGTACGACGGAAATGAGCGAAGAGGAAACAGATTTCTTTAGCTTCGGCGCTTTACAAGATATGTTGCCTGAAAGTACGACCGCTGATGTTAAGTTAGAACCACCGGACGAAGTGTTGGCAGATGATAATATTAAGATGGAACCGGTATCaccataa
Protein Sequence: MFLNTLDFVCDYCSRTFTRKCNLQSHMENYHINLSRHCNICDRSFCSPTSLQQHIARGHNNYGQPFPECELCGRIFTRKQNIVSHMITAHLQGLGFEIRCKFCDKTFTTDRNLKRHVNQLHNPDVEYPTCNDCHRVFKGKHSLIAHIQSVHNISEKEAIKCHLCEKVYTNNRNLKRHIEMFHGERGEYRCDICPKVYTSNQSLRRHARTRHSTENQDHLTCGLCMKVIVGRENFDSHIQFHHQDIEIENKPPGFVCESCDKVFDEEPYLRQHVKSEHSFKTFYKYCKNSLLKQYGLDTHNVYNCEYCGQSFLTVYELKDHMRVNHDAEYSLSTCNVCFSKFFSKETMSAHKNICLPPPNVNSCSYCDKLFTDISSLEFHTRIFHPQAQIADSNITSTNIDDESVSFKCEHCDRIYYSDRSLKHHIKLKHTTDEEVECQICGKICSNKYYLASHIKIVHTNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRHKCIECETLFKEKRSLRKHVRTKHPNSTSFPQCHFCHKRFESAKSCKIHLKLLHSFNMNTHPCHLCSVSFSSNEALNIHIETKHLAEDEIYKCEECNLVFRGQEKFDSHNEVCHVNLVSNIKQKVLPRCILCMKDFSSRKTLKRHIKKFHEEFDVDELANFGSRRRTFNVECEDCIKNFNDDFHLNVYNKLKHLRDSEIFKCDVCLVSYNSLEYAIQRYKVTNADACRSKMILSELCTTEMSEEETDFFSFGALQDMLPESTTADVKLEPPDEVLADDNIKMEPVSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00447464;
90% Identity: iTF_00018365;
80% Identity: iTF_01377705;