Smeg021231.1
Basic Information
- Insect
- Subacronicta megacephala
- Gene Symbol
- Mblk-1
- Assembly
- GCA_958496365.1
- Location
- OY292535.1:8607172-8647801[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-13 3.4e-10 40.1 0.0 1 37 287 324 287 329 0.92
Sequence Information
- Coding Sequence
- ATGTCGTTTATAGGGTTCCGTGAATGGTTCCAGTTGTTCacagtagGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATATCAGGACGCGTTAATTCCAAAACGGGGGGAGGGAGAACTTTCCAGCGACGAAGAATCAGTCCAGACCGACCCGCCACCTGCCCTGAAGATCAAGACTATAGAGCAAATCAACGAAGACGAGGCCAAGGAGGAGAGAGTGGAAGAGAAGGTGCCTCGGAGACCAGAGACGATCCTAGAGTCGTTGATCAAGAGGCCTGCAACCCAGCCCAAGGTGGAAGTGCCCGAAGAGCCAGCGGACTGGAAGCCACAGGACAAATGCTACTTCTGTACGGATGGTGAGCCAGGAGGGGGCGACAACAGGACAGCAGGAGCTATGAGTCCCGCGTCGGAGTCGGACAGCAGTTCGGTGTCGGGGGCAAAGAGCCCTGCGTCGGCGCCGCCACTGCTGCAGCACTTGCTCCAACTCCAAGTGCAGAATCCGCAGACTATAGCACAGGAATACACAGACATGTGTGTGCAGTTTCAGCAGATGCTGACGGCGTTGGCGGCGCTTGGCAGCGGGCTggtgccgccgccgccgctctCGCAACCCTGGATGATGCCGCGGCTTGTGCACAGGCAGACCGATAGGCTACCGGAGGTGGGTGAAAAGGCGCCGGCGTCTTCGTCCCCCAACCTCGCTGAGCAGCCCCTCGACCTGAGCGCCAAGTCTACCTCCAGCACCAGCGGAACCCCACCACCTGATGCCAAGCTCTTGGATAACAGATTGAAGCGTGCAGTTATGGACGGCGCCAGCAACAGCTCAGGCCGTCGCGCGTATACGGAGGATGAGCTCCAGTCAGCGATCCGTGAAATACAGTCAGGCCGGCTTGGAACCCGACGAGCCTCCATGGTCTACGGTATCCCGCGGTCTACCCTCCGCAACAAACTCAACAAATACGGCACTGTTATAGAAAACGTTGAATCAGATAACGACAGTGATCCCGACCGCGCCGACTCGCCCCCCTCAGTCATCCTCAAGATACCAACTTTCCCCCCGCCCGACGACAAAAGCCCCTCCCCGGCGGCACAGGTTCAAGCCCCCATCACGCCGATAACACCAATGATTCCAACAGTACAGCCCTCCCTCAAACCGCCGTCACAGCTGTTGCTTCCGCCATCTGTGTTCGCCGACCCCCCCCTCCACACAACACCTCTTCACGTCCCTTAG
- Protein Sequence
- MSFIGFREWFQLFTVGLERVAEELMGRRKWKLYQDALIPKRGEGELSSDEESVQTDPPPALKIKTIEQINEDEAKEERVEEKVPRRPETILESLIKRPATQPKVEVPEEPADWKPQDKCYFCTDGEPGGGDNRTAGAMSPASESDSSSVSGAKSPASAPPLLQHLLQLQVQNPQTIAQEYTDMCVQFQQMLTALAALGSGLVPPPPLSQPWMMPRLVHRQTDRLPEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDAKLLDNRLKRAVMDGASNSSGRRAYTEDELQSAIREIQSGRLGTRRASMVYGIPRSTLRNKLNKYGTVIENVESDNDSDPDRADSPPSVILKIPTFPPPDDKSPSPAAQVQAPITPITPMIPTVQPSLKPPSQLLLPPSVFADPPLHTTPLHVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00952618;
- 90% Identity
- -
- 80% Identity
- -