Smeg025397.1
Basic Information
- Insect
- Subacronicta megacephala
- Gene Symbol
- arid5b
- Assembly
- GCA_958496365.1
- Location
- OY292542.1:6863697-6896859[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-16 1e-12 49.0 0.1 3 89 357 433 355 433 0.87
Sequence Information
- Coding Sequence
- ATGAGCGGTATTAACTGGGTCCTATCTGAGAATCTTTCGTTCGTCCCAATGAACCCTAACGGTCATGACGAAGTTTTTCTTTGTGATGAATTATGCACCTTGGACTTGAGTCAGTACAATGGTGTCCTTAACAAATATGGCAAAATTTTAGATTTGGTGCTTTCTAATCAATTGGCTAAAGTGGCTGAATGCTCAAGCCCGCTGGTTCCCATTGACGCCTATCACCCAGcactattaattaatatgaacTTCGTTGGAGCTCCTCCGTTAGAGTGCGCGTCACGGACGCAATTTCTGTTCGACAAAGGTGACTATGAGTCTATCAATAATGATATCTGTATGATCGACTGGGAACTTGAGTTTGCGACACGATCAATTGATGATTCAGACGAAGTGCTAGCCATCAACGACAAGGTAGTCCTTCGAGCAGACGACCTTCTCAGCTGGATCTGTGTGGGCACGGAGTGGCGCTGGGGGCTGAGGGCGGTGTGGCGCGGCGCCTGCGCTCCCCCCGCCGACACGCCGCGCCACGCGCCGCTGCACCACACCAAGCTGGACTTCAGCGATGTTGCCAGCGAGAAGAATACCATCGAGGAAGACGCGACTGCCCCCGGGGTCGTGGTGTTCTCGTACCCTCGGTATTGCCGCTACCGGGCCCTTATAGCTCGGCTGGAGGGCATCCAGGCCTCCTGGCTGCGGGACTCCCTGGTGGCAGCCCTAGGCGGGTACGCAGCGCCCACCAGTAATACCAGGATCCTGTACTGCAAGGAGACGTTCGAATACCCGGAGCTGGAAGGTCACGAGTTCGTGTGCAACCACCTGGCGCCGCGCCTGAAGGGCCGGCCCCGGGGGCGGAGGCGCCGCGCGCCGCACTCCCCCTCGCCCTCCCCGTCCCCGTCCCCCGGCAGGTCGGGCCGCTCCGACACGGAGTCCCCGCCCcccgccgcgcccgcgcccgcgcccgcctcGCCCACGACCCCCCGCCGCCTGTCTCTCCGCAACGGCGCCCCACAACAGAGTGATGAGGAAGACGAAGACTACAAGAGAGTGGAACAGACGCCAGAAGACCGCGCATTCTTGCAACAACTCAAGATGTTCTACAAGAATCGAGGGGAGCCCTTCAAGAGTGGGCATACGTTGAAGCATTtatcgCTGCGGGCGCTGTACATGTGTGTGACGTCACGCGGCGGGTACGAGGCGGTGTGTCGGCACCAGCTGTGGCGctcgctggcgctgcacccgctgcaCCAGCCCGCCAGGACCCGCAGGCACTACGAGAGATTCCTCCTCCCCTTCGAAAACCACGAACGTAGAAACGGCAGTGCAATAACATACAAAATCAACGGCAAAATAGATGCGGAACCTCACACAATAGCCACCATTGACGTCACGGACTCCCCCCTCCGCGACGATGACGTCAAGATCCTCCGCACGCCCTCCCCCAAATTAGAAAACTACGATCTTTTAAACCCGGACGTGGACAGCGAAACTGGTGAAATAACATCGAAAGACGATATCATAGTGAAGAACGCAGAAGAGTTGAATAGAGAGTTCCTAGAATCTTTGCCAAAAGAAGAGAAGATTGTCAAAATATCTGTCAAACCCGTGGAGAAGTTGATAGAGCCGAGTGCAGTGAAGTTGTTTGAAGGTAGTGTTGCTGGGGTCTCCAAACTCGAAATTACTAGTAAAGTCGAGGATGGAAGGGATACAACTAGAAACTACTTGAACGATTTGCAGACATTTAATATCGgAACGGATCCGTCGCGCTCAACGTCGCTCAACGGTCACGCTGCGCCTACACATCTTAAATCGGCGCCAGGCTCACTGCGATCGCTTCGCGCTGTGAGGGTTAAACAAGGTCGGGGCCCCCCCGCCCCCGGACACAGCGGCCCCGGACACAACGCCCCCGGACATAGCACCCCCGGACATAGCGCCCCCGGACATAGCACCCCCGGACATAGCACCCCCGGACTCAGTGCCCCCGGACACAGCGCCCCCGCGCCTCTAGTACCCGCCCCGCGCCCCGCTACCGCCGATCCTGCACTGAACCCGCTGCGCTGCGACTCAGTGTCGTCGTCTCCACCGCTGGGCATGTCGTCGGTGGCGCCCCCTATCACCAACTTCGGCATCCACCATCCGCCGCAACAGAACAACTCGCACGTCGATGACGACATCGTCGAGGTCCCCTACAAGCCTAAGACCCCCGAAATAATCGACCTCGACGAGTACCCCGAAAGCCCCCAAGCAGTGAAAAAGAAGAAACTCGACATCTTGAAGGAACGGGGGCTAGAGGTAACCGCGCTGCCCCCCTGGCAGGGGGTCCCGCCGCAGATGATGACCCCTCCGATCATGTTGAACCCGGCGGTGCAACACCAAATCATGACGCAAGCACAATTATTccaaatgtataatattattccaCCTAATTATGCCAACGGTATTCAACCCCCCAAAGTTATTCAGGCATCCTCTATATTCGGTACGTCAGGTCCCGAGAAGACTGTTTATGGGAATCCTAAAGACCCCTTCATGCCCCCACCTCACGTGATACACGGCGTTCCAGTCAAACCGTTGCGGACTGCACCCCCAACGATGACCCCTCAGGATATCCTCGACTTGACCTGTAAGTCTAGCAGCCCCCCTCCCCAAAAGCCTGCCGTGGAAATAGTCAGGGTACCCCCCTCGCCCTCCCCGAATCACACAGCTCAGAACTTATCAAAGAATTATACATTAGTCGATGGCAAAGCGGTGGTCGGATCAAATTTAGAAATAACTTTAGTCAATAAAGCCCAAAGTCCTGGGAAGAATAGACCCCCACAGAAGCGGTCCAGCAACGGGAAGTTCATGTCGACGAAGACCCCCACTCCCCCTAAAGAGACCTACCCTAAATACAGCAGCCCCTCACACACTAGTACCCATAAAAAACCCCCTATCAACATCCCTAATTACCAAATAAGAGAAGACACCCCCCCGAATCAAAGTCAGATGCTCCAAAACGCAATGAAAAACCAGAATCTAGCTCAAATTATGGATTTACAGAAAAATTCTGTTCCTATGACCTCATTTATGGACCCTTACATGGCTCTGTATAATAGTTTAGCGGGTCAAATGGACCCCAGACAGCTGGCGATGTACCGCGACCTGATGGCCAACCAGATGCGAGGGTACCCCGGTCTGCTCAACCTGGGGGTCTCTAGTACACCAACAACGAAAAATTAG
- Protein Sequence
- MSGINWVLSENLSFVPMNPNGHDEVFLCDELCTLDLSQYNGVLNKYGKILDLVLSNQLAKVAECSSPLVPIDAYHPALLINMNFVGAPPLECASRTQFLFDKGDYESINNDICMIDWELEFATRSIDDSDEVLAINDKVVLRADDLLSWICVGTEWRWGLRAVWRGACAPPADTPRHAPLHHTKLDFSDVASEKNTIEEDATAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKETFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAPHSPSPSPSPSPGRSGRSDTESPPPAAPAPAPASPTTPRRLSLRNGAPQQSDEEDEDYKRVEQTPEDRAFLQQLKMFYKNRGEPFKSGHTLKHLSLRALYMCVTSRGGYEAVCRHQLWRSLALHPLHQPARTRRHYERFLLPFENHERRNGSAITYKINGKIDAEPHTIATIDVTDSPLRDDDVKILRTPSPKLENYDLLNPDVDSETGEITSKDDIIVKNAEELNREFLESLPKEEKIVKISVKPVEKLIEPSAVKLFEGSVAGVSKLEITSKVEDGRDTTRNYLNDLQTFNIGTDPSRSTSLNGHAAPTHLKSAPGSLRSLRAVRVKQGRGPPAPGHSGPGHNAPGHSTPGHSAPGHSTPGHSTPGLSAPGHSAPAPLVPAPRPATADPALNPLRCDSVSSSPPLGMSSVAPPITNFGIHHPPQQNNSHVDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPWQGVPPQMMTPPIMLNPAVQHQIMTQAQLFQMYNIIPPNYANGIQPPKVIQASSIFGTSGPEKTVYGNPKDPFMPPPHVIHGVPVKPLRTAPPTMTPQDILDLTCKSSSPPPQKPAVEIVRVPPSPSPNHTAQNLSKNYTLVDGKAVVGSNLEITLVNKAQSPGKNRPPQKRSSNGKFMSTKTPTPPKETYPKYSSPSHTSTHKKPPINIPNYQIREDTPPNQSQMLQNAMKNQNLAQIMDLQKNSVPMTSFMDPYMALYNSLAGQMDPRQLAMYRDLMANQMRGYPGLLNLGVSSTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00017965;
- 90% Identity
- -
- 80% Identity
- -