Basic Information

Insect: Sturmia bella
Gene Symbol: -
Assembly: GCA_963662145.1
Location: OY759172.1:67881929-67887497[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00047 0.031 15.1 1.0 1 23 119 141 119 141 0.98

2 14 0.00032 0.021 15.7 2.3 2 23 375 396 374 396 0.97

3 14 0.057 3.8 8.6 1.4 1 23 447 470 447 470 0.96

4 14 0.11 7.5 7.6 1.6 2 23 532 553 531 553 0.96

5 14 9.7e-05 0.0064 17.3 2.8 3 23 719 739 718 739 0.97

6 14 0.22 14 6.8 3.1 1 23 745 768 745 768 0.96

7 14 0.47 31 5.7 0.1 1 23 802 825 802 825 0.96

8 14 0.063 4.1 8.4 0.3 1 23 833 856 833 856 0.96

9 14 0.15 9.7 7.3 1.7 1 21 992 1012 992 1013 0.93

10 14 0.0082 0.54 11.2 8.7 1 23 1030 1052 1030 1052 0.98

11 14 6.1e-05 0.004 17.9 0.1 1 23 1057 1079 1057 1079 0.93

12 14 0.29 19 6.3 6.7 1 23 1085 1108 1085 1108 0.94

13 14 0.013 0.86 10.6 0.9 1 20 1113 1134 1113 1137 0.89

14 14 0.0051 0.34 11.9 2.2 1 19 1143 1161 1143 1166 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00047	0.031	15.1	1.0	1	23	119	141	119	141	0.98
2	14	0.00032	0.021	15.7	2.3	2	23	375	396	374	396	0.97
3	14	0.057	3.8	8.6	1.4	1	23	447	470	447	470	0.96
4	14	0.11	7.5	7.6	1.6	2	23	532	553	531	553	0.96
5	14	9.7e-05	0.0064	17.3	2.8	3	23	719	739	718	739	0.97
6	14	0.22	14	6.8	3.1	1	23	745	768	745	768	0.96
7	14	0.47	31	5.7	0.1	1	23	802	825	802	825	0.96
8	14	0.063	4.1	8.4	0.3	1	23	833	856	833	856	0.96
9	14	0.15	9.7	7.3	1.7	1	21	992	1012	992	1013	0.93
10	14	0.0082	0.54	11.2	8.7	1	23	1030	1052	1030	1052	0.98
11	14	6.1e-05	0.004	17.9	0.1	1	23	1057	1079	1057	1079	0.93
12	14	0.29	19	6.3	6.7	1	23	1085	1108	1085	1108	0.94
13	14	0.013	0.86	10.6	0.9	1	20	1113	1134	1113	1137	0.89
14	14	0.0051	0.34	11.9	2.2	1	19	1143	1161	1143	1166	0.91

Sequence Information

Coding Sequence: ATGAATGACAAAAAAGATGTGGATTACACTTCAGTGTGCAGGACATGTCTGCAATCCAATGCGGAGATGCTATTTTTAAGCGCGCATATTAGTGACAGCATTAAAAAAGAGGAAAGTTCTGGATTATCCTACCTGGAATGTTTGAAAATGTGCATCCAATTCGAAGAATCGCCAGATCTCATTATGCCGCAGAGAATTTGTTTAGAATGTGCATCGGCTTTACAAGTGTGTTATTGGTTTACGAAAAATGCGATGCAGGCTCAGAATCTGCTAAAACTCAAGTTGACAGATATTAAACGTAAAAAACGTTTCCACGAAATTGAGAAATCGGATGATGCTGTGAAGCCAAAAAGATACCGTTGCAAAATTTGCAACGAAAGAGTGGAAACTAAAAGATCCCTGAAAGACCACGTCAAACTGCATTTAGATATTATTGTTTACAATTGTCAACTTTGTTCCTTTGAAAGCCataaacgaaatattttaaGCGACCACTATACCCAAATTCATGACGTCGAAGCAACTAGAGAACAACTGAAGCCAACAACAAGGCTGTTAGCATCAACCCCCTCTAAAGTGCGACCTTGTGATCGGGAGGATggtgcaattaaaagtgatcattttcaaatattaccCGAAGAATCCTCACAAATTTCTTGTCAAAAGTTTGTAAAGAGTTCTTCGTGTGAAGTTGGCACGCTACAGATTTCCAATTACAATACAAATTCCAACTACAATGCAGCCAATGTACCTTTTAACACTATCGGTGCAGAGATTATTAATGATTTTAGCATGAAAAACGAATTTTTGGTTATGGCTGATGGCAGTATAGGAAAAGTCCTGAATAAAGACGTTGTTATAGAATACATAGATGCTCAAAATAATGGCAACAATTTCACATTGGACAATGGTTTTGTAATCGATAATATAATGGAAGTGCAAAACGCGAACAATTCTCCAATGATGGGACAAGAGAACGATATTGGGCAAATGGACGTTGATGATTTAATTATTGAGGATCCAGCTGAAGCTGTAGAAGAAACGCTAgTTGAAGGAAATACTATACTACCTTTAGACGAAGAAATAATACCAGCAACTTTTATTGAACAGCCCAAAAGGATAATGTGTAAAATTTGCACTAAAGATTTTTTGACGCAAGAACACTTAAAGAATCATATGTTAACTCACAatgAAATACCACATTTTTTCTGCGATCAATGCACGTTTTACACcttcttcaaaattgatttACATCAGCACTACAAAAGTAAACACAATCTACAACCGTCTAATAAACAATTGcaaccaaaaaacaaacagagAAACTTAAGCGAATACTATTCCTgtgatttgtgtttttatgaAGCTGAGACAAAATTCGAGTTGAAGAAGCACTATAGAGCGAAACATCGCATTGAGGCTAATGAGGTACATTTGAAACCTACAAAAGTCGAAAGAGTAAAGTCAAAGTGTTCACCTCTGACTGCCAAGGCAAAAGCAGCTGCAATTGGGAGCAAACCACCAGCAGAGACAACTAAAAATGATCAAACGCGTTCCGATGAGGGGTCAGTACCCGATTATCTCAATGGATTGAATTGCCGCAAATGCCAAAAGGTGTTCTACTGGCGCAAGGAACTTTATGAACATTACAAAATGCATAGCGCTGAAGAAGCCGCTCTCAAGCAGGCAAAACAAATGGTCAAAGCACAAAGTAAGCCGACTTTTTCGAACATTCGCGCAAATAAAGTCACAGACGTAAGAACCATGCTAAATAACGTATCAAAAGCCACGCAGCCGCCACTGCAAACAACAAATACTTCAACTTTTACCAGTCTTGGAACGTTGGCTGTGAGTGTAGCTGCTACAAATGTTAATTCGCTCAATTCAGTGGCTCCACTGACACCATCTTCAAGTTCGACTTACACATTGCCTTCTGATGCCGTACCACAGATTGTGGAAACTGACCACACCATAGAGAATGTAATGGACTTCGATTTCAATTGTGACGATGATGCGCTGTTTGGAGATTTTGACGATGACGTTGATGTGGAGAATAATTCCGATGAGAATGATGCCGAGTTCTGTAATGTGCTATTAACTTCTGATGATGATTGTGAAGATGCTTCGTCTAGTCTAGGCCCAAGTGGGCCGTTTTGCGCTCATTGTCAAAAGTCATTTTCGAGTCAATATCAATACGAAAATCACATGTTTGTGCACCGAGGATTGGCTCCTTATCGTTGCGAATTGTGTACCAATCTCTACAATACGAAACGTTGTTTGATTCGTCATTACAAAGCTGTACACAAAAATGTACCTACCAGGGATATGATTCAAGCTAAGGGCGATAAAGtgtgtgACGACAAAATCCCTATTGAACATTTAAAACTTGAACCGACAACTTGTTTCATGTGCGGAAAGTGCCCCTATGAAGCTTCAGAGTTAAATAACATTAATAGCCATATTAAATCGAGTCATAACATAGAAGATGAATTACCTTTTGAATGCCCACGCTGTATACGGTCGTTTGCGAACAAGCTTGTGCTATTGAGACATTTGGAACGGAATCATAGTTTGACACCAATTAATCAGCATCAGAAGGTGCACGACAGTGGCAAAGGTATATCGGCAGTAGCAACGAGTACGTCGGTCACATCAAGTACTGCAACTATAAATAATCATGTAAATATGGTGAAAACAGAAACCATTGAAACAAGCGCAAGTTGCGGATACAGTCAGTTATTCATTGAAAAAGAACAGGGCCTTGAGTGCCAAAACAAACGTTCAGATGCCGTAGCAGGTGATATTATCACCCCTTTCGAAGAAACTCTCAGACCGACAAGAGATTTGGCTAATAATGAAACCTCTGCCAGCAGCATCAGTTCTGTTACCAATATGCCTTATACCTCAAATGAAATTGCCGCACTCCCCATCATTGCAACAGCTCTAGACGAGAATGACAAAGGCCAAGCCCTGTTTAAGTGTAAAATATGTTCTCTGACTTGCTACGATATGGCAAATTTTAACGAACATGGCAAACGCATTGAGTGCCGTACTCTAAGTGTTTCTAGTCCTGGCGACAAAATGCTGTTTGAGTGTGAGATTTGCCACTGCACATATAAGACAATGTACTTATTAAAACACCATTTGAAACGCCATATTGGCAGAAAATTTCCGTGCGCCGATTGcccaaaaacttttataaacaaAGTCGAGCTAAGAGCTCACAAGTATGCGCACAGCGGAGAAAGACCCCACAAATGTGATGTGTGTACAAAATCATTTCTCTACGTTCACCACTTGAAGCGTCACAAAGACAGTGTGCACTATGGCAAACGTCATCCCTGCACCGAACCAGATTGCAGTCGTAACTTTACAACGCTGACCCAACTCAAAATGCATTTGTGGACTCACAATGGCATTGTACCCTACAAATGCCCGCTCTGCAACCGTGTATTTAAAAAGAGACTGCTTCTGCGTGATCATTGCGCTAAAATCCATTATGTAAATTTAAGCGAGGAGGAGATGGCTAAAATATTTCGAAATAGTTTAGGATACACGAACCCTCATGACTTCACCGTTATACTTGGCAATGGCGAAATGCTGCGGCGTGGCGACCTGGAATCCATGAGTGCTGCAGCCGTAATCAAACGTTCATTTAAATAG
Protein Sequence: MNDKKDVDYTSVCRTCLQSNAEMLFLSAHISDSIKKEESSGLSYLECLKMCIQFEESPDLIMPQRICLECASALQVCYWFTKNAMQAQNLLKLKLTDIKRKKRFHEIEKSDDAVKPKRYRCKICNERVETKRSLKDHVKLHLDIIVYNCQLCSFESHKRNILSDHYTQIHDVEATREQLKPTTRLLASTPSKVRPCDREDGAIKSDHFQILPEESSQISCQKFVKSSSCEVGTLQISNYNTNSNYNAANVPFNTIGAEIINDFSMKNEFLVMADGSIGKVLNKDVVIEYIDAQNNGNNFTLDNGFVIDNIMEVQNANNSPMMGQENDIGQMDVDDLIIEDPAEAVEETLVEGNTILPLDEEIIPATFIEQPKRIMCKICTKDFLTQEHLKNHMLTHNEIPHFFCDQCTFYTFFKIDLHQHYKSKHNLQPSNKQLQPKNKQRNLSEYYSCDLCFYEAETKFELKKHYRAKHRIEANEVHLKPTKVERVKSKCSPLTAKAKAAAIGSKPPAETTKNDQTRSDEGSVPDYLNGLNCRKCQKVFYWRKELYEHYKMHSAEEAALKQAKQMVKAQSKPTFSNIRANKVTDVRTMLNNVSKATQPPLQTTNTSTFTSLGTLAVSVAATNVNSLNSVAPLTPSSSSTYTLPSDAVPQIVETDHTIENVMDFDFNCDDDALFGDFDDDVDVENNSDENDAEFCNVLLTSDDDCEDASSSLGPSGPFCAHCQKSFSSQYQYENHMFVHRGLAPYRCELCTNLYNTKRCLIRHYKAVHKNVPTRDMIQAKGDKVCDDKIPIEHLKLEPTTCFMCGKCPYEASELNNINSHIKSSHNIEDELPFECPRCIRSFANKLVLLRHLERNHSLTPINQHQKVHDSGKGISAVATSTSVTSSTATINNHVNMVKTETIETSASCGYSQLFIEKEQGLECQNKRSDAVAGDIITPFEETLRPTRDLANNETSASSISSVTNMPYTSNEIAALPIIATALDENDKGQALFKCKICSLTCYDMANFNEHGKRIECRTLSVSSPGDKMLFECEICHCTYKTMYLLKHHLKRHIGRKFPCADCPKTFINKVELRAHKYAHSGERPHKCDVCTKSFLYVHHLKRHKDSVHYGKRHPCTEPDCSRNFTTLTQLKMHLWTHNGIVPYKCPLCNRVFKKRLLLRDHCAKIHYVNLSEEEMAKIFRNSLGYTNPHDFTVILGNGEMLRRGDLESMSAAAVIKRSFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -