Basic Information

Insect: Sturmia bella
Gene Symbol: -
Assembly: GCA_963662145.1
Location: OY759170.1:78065098-78074668[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0036 0.23 12.4 1.2 3 23 279 300 278 300 0.96

2 14 0.00068 0.045 14.6 0.6 3 23 312 333 311 333 0.96

3 14 0.00013 0.0087 16.9 0.7 1 23 339 361 339 361 0.98

4 14 0.0004 0.026 15.4 2.0 1 23 367 389 367 389 0.98

5 14 0.15 10 7.2 0.2 3 23 397 417 396 417 0.98

6 14 0.00031 0.02 15.7 1.7 1 23 422 445 422 445 0.95

7 14 0.011 0.72 10.8 4.1 1 23 451 473 451 474 0.96

8 14 0.00056 0.037 14.9 1.7 2 23 559 581 558 581 0.95

9 14 0.023 1.5 9.8 0.7 2 23 592 614 592 614 0.96

10 14 0.0023 0.15 13.0 1.2 1 23 620 642 620 642 0.95

11 14 0.012 0.8 10.7 2.4 1 23 648 670 648 670 0.97

12 14 0.046 3 8.9 0.1 3 23 678 698 677 698 0.98

13 14 5.7e-05 0.0037 18.0 0.2 2 23 704 726 703 726 0.94

14 14 0.066 4.3 8.4 7.2 1 23 732 754 732 755 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0036	0.23	12.4	1.2	3	23	279	300	278	300	0.96
2	14	0.00068	0.045	14.6	0.6	3	23	312	333	311	333	0.96
3	14	0.00013	0.0087	16.9	0.7	1	23	339	361	339	361	0.98
4	14	0.0004	0.026	15.4	2.0	1	23	367	389	367	389	0.98
5	14	0.15	10	7.2	0.2	3	23	397	417	396	417	0.98
6	14	0.00031	0.02	15.7	1.7	1	23	422	445	422	445	0.95
7	14	0.011	0.72	10.8	4.1	1	23	451	473	451	474	0.96
8	14	0.00056	0.037	14.9	1.7	2	23	559	581	558	581	0.95
9	14	0.023	1.5	9.8	0.7	2	23	592	614	592	614	0.96
10	14	0.0023	0.15	13.0	1.2	1	23	620	642	620	642	0.95
11	14	0.012	0.8	10.7	2.4	1	23	648	670	648	670	0.97
12	14	0.046	3	8.9	0.1	3	23	678	698	677	698	0.98
13	14	5.7e-05	0.0037	18.0	0.2	2	23	704	726	703	726	0.94
14	14	0.066	4.3	8.4	7.2	1	23	732	754	732	755	0.96

Sequence Information

Coding Sequence: ATGGCCAATGTTGATAAAAATGAATGTTTGATTAATGGAGTCCAGTATAAATGTCGGACATGTTTTGATCCAGGCCGTACTATTTACCAACTCTCCGATGAGGCCAGCAACAAGAAAACTTGGCTTGATTTGCTAAAAAATGTTGCACAGTTAcagGCGAATGATGACGAAAATCTACCAAAGACGTTGTGCTGCAAATGCTCGGAAAAACTCAAGAGATCTTATGATTATGTTATACAAATTCAGGacgtaaatgaaaaatttgcggAATTGTTGGCAAAGCACGACGTTCTGAATCAAGTCGATAATATTGCTGATTGCTTAGCAGAATCTGCTATTGCTTTGCCATTGGAACAGTACATCCCAGAAGTGAAGCTTGAAGAAGAAATGGTCATGTCGTATGATATTAATATTTCCAACAAATTAGAAGATGACAGTGAAGAGCGGTTTGAAAATGAAGATTTCGACAAAGCACCGCGGGAGTTCGGCTTCAAAGATGAGCGGAGCAAAATTGGACGAGAGTTTAATGCCTTGGGTCCACCAATATGGGAAGCTGAAGGATGGATGATTAATCCACAAAAGggctctgatgagcgtcgtggtgctggtggtggtggtggtggggaAACAGCATGGctgttgtaccccagccatgcaATAGAAACAACCGGAGAAAATACAGCAAAGCGAAAACGTCgtaaacaaaaagcaacaagCGCAAAGCTATTTTGCAAACAAGTGAAGCGTCGTTCTACCAGAATCGTACAGTCGCACGATATTACGGCGGAGGGAGCTCCAGTGGATTGCAATGGCGACGGAAAAGAAGCAATTCTGTGCGGAAAGTGCACAAAAGCTTTTATCACTATGCACGCTTATCAAAGGCATCAGCAAGAGGAGCACTATTCCGAAGAGCTTGATAAGGACAAAGGCATATGCCCGCTGTGTTCGAAAAAGTTTAGCAACCGGTTTTACGTAAACGAGCACATCAAAAATGTACACGATAAACTAAAACCGTTCAAATGTTCCGATTGCACAAAGAGTTTTGCAACAGCTGCTGCCAAGAAAACGCACGAACTCACGCACACAGACGATTTCCCTTTCAAATGCGAATTTTGCGACAAGCGCTTTCGCCTCTCCATCAAGTTGAAGTATCACTTGGAAATACATACAACCAAACCTGAACTTTTGTGTCCCATCTGCAAGAGAGGCCAAAAATCGCTGACGGAACTGGAAGCTCATGTCAAAAATCACGACGACAATCGCTTTCAGTGTCCCTCGTGCGGCCACCTGTTTAGAAAGAAAACCAACCTCAATGAACATTACAATGCCGTTCATTTGAAACTGAGGCCATATAAATGTGAAGTTTGCCATCAGGGTTTTGGTGATCGCAAATCCAGGCGCGTGCACGAACGCAGCCACCACAAACGAAAAATATCTGCCATtGCAATTGAAGCAACGGCTGAAAATGCAACGAAACGAAATCGTGCCAAACGGAAAAGTGGCAACAAAAACGTTTCACTGAAACGGATGAAATGCTCGAAAAATACTAAACAGCCAAAGGAGATCAGATGCGATGCAGTTCAAAGAACTGATAAAGccaaagaaaagaataaaattggAGAAACAAAAGATGAAGTTCAAGAATTGCACGATAGCGGCGCGAGCAAAACGATTGTTTGCGCTAAATGCCCGCAGACATTTTGCACTTTGTACGAATATCAAAGACACCAATATAAAGAGCATTCTGCAGAGAGGCTACACGAAGGCCCAAACGAATGCCCCCTTTGCTCAAAAAAGCTGTGCGACAAGTCTCGTGTCATCGAGCACATAAAAGTTGTACACGATAAGCTTAAGCCGTATAAATGTTCGCACTGCCCAAAAACGTTCGCCGCATTATCGGCCAAAAACAGTCATGAACTCTCGCACACAGACATATTTCCCCATCAATGTGACGTTTGCCAGAGGCGTTTTCGCCTCTTCAGTAAATGGAAACTGCATTTAGAAATACACACTACCGAACCCGAACTTTTGTGTCCCATCTGCAAGAGAGGACAAAAATCGGCCGAAGAGCTAGAAGATCATATAAAAAATCACAATGACAACCGATTGCAATGTCCCTCGTGCGGCAAGCTGTTTACGAGAAGGCCAAATCTGAACGAACACTACAATGCTGTGCATTTAAAACTGAAGCCATATAAATGCCGATTTTGTGATCAGTGTTTTGGCGATCGCAAATCGAGAACAGTGCACGAAAGAAGGCATCACTAA
Protein Sequence: MANVDKNECLINGVQYKCRTCFDPGRTIYQLSDEASNKKTWLDLLKNVAQLQANDDENLPKTLCCKCSEKLKRSYDYVIQIQDVNEKFAELLAKHDVLNQVDNIADCLAESAIALPLEQYIPEVKLEEEMVMSYDINISNKLEDDSEERFENEDFDKAPREFGFKDERSKIGREFNALGPPIWEAEGWMINPQKGSDERRGAGGGGGGETAWLLYPSHAIETTGENTAKRKRRKQKATSAKLFCKQVKRRSTRIVQSHDITAEGAPVDCNGDGKEAILCGKCTKAFITMHAYQRHQQEEHYSEELDKDKGICPLCSKKFSNRFYVNEHIKNVHDKLKPFKCSDCTKSFATAAAKKTHELTHTDDFPFKCEFCDKRFRLSIKLKYHLEIHTTKPELLCPICKRGQKSLTELEAHVKNHDDNRFQCPSCGHLFRKKTNLNEHYNAVHLKLRPYKCEVCHQGFGDRKSRRVHERSHHKRKISAIAIEATAENATKRNRAKRKSGNKNVSLKRMKCSKNTKQPKEIRCDAVQRTDKAKEKNKIGETKDEVQELHDSGASKTIVCAKCPQTFCTLYEYQRHQYKEHSAERLHEGPNECPLCSKKLCDKSRVIEHIKVVHDKLKPYKCSHCPKTFAALSAKNSHELSHTDIFPHQCDVCQRRFRLFSKWKLHLEIHTTEPELLCPICKRGQKSAEELEDHIKNHNDNRLQCPSCGKLFTRRPNLNEHYNAVHLKLKPYKCRFCDQCFGDRKSRTVHERRHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -