Basic Information

Insect: Sturmia bella
Gene Symbol: salm
Assembly: GCA_963662145.1
Location: OY759171.1:21100053-21106782[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 6.5e-06 0.00043 21.0 0.9 1 23 511 533 511 533 0.98

2 7 1.3e-05 0.00085 20.0 2.1 1 23 539 561 539 561 0.98

3 7 0.022 1.4 9.9 1.5 2 23 923 944 922 944 0.98

4 7 9.3e-08 6.1e-06 26.8 0.5 1 23 950 972 950 972 0.98

5 7 0.00028 0.019 15.8 2.3 1 23 982 1004 982 1004 0.98

6 7 0.048 3.1 8.8 3.1 2 23 1372 1393 1371 1393 0.97

7 7 3.6e-08 2.4e-06 28.1 1.3 1 23 1399 1421 1399 1421 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	6.5e-06	0.00043	21.0	0.9	1	23	511	533	511	533	0.98
2	7	1.3e-05	0.00085	20.0	2.1	1	23	539	561	539	561	0.98
3	7	0.022	1.4	9.9	1.5	2	23	923	944	922	944	0.98
4	7	9.3e-08	6.1e-06	26.8	0.5	1	23	950	972	950	972	0.98
5	7	0.00028	0.019	15.8	2.3	1	23	982	1004	982	1004	0.98
6	7	0.048	3.1	8.8	3.1	2	23	1372	1393	1371	1393	0.97
7	7	3.6e-08	2.4e-06	28.1	1.3	1	23	1399	1421	1399	1421	0.99

Sequence Information

Coding Sequence: ATGTCTTGCCGTTTAGATTCAGCCAGTGATCATGAAGAGAATGGTACATGTTCACCTTTGGCTGCCACAACCGCCAATGAAGATAGTGATTGCGATAGAGCAGAATTAACTCATATGGCCGCTAGTAATGaacttgttaataaaattaacacAACACCCGCTGAAGCCGATAAACAACAGCCACAACAGACTTCTGCGGCAGGCCTCTCAGTTACAGAAGGAGCAACAGCTGCAGCAGCAGAAgcagcagaagaagaagaaaaagaagaagatcTTAATCATAACAACAACCTTGTAATGCCTATGGAAGAGcatcagcaacagcagcagcagcagcaaaaacagCAGGAGTTAAAAAAGATACAATCTCCGGCACATGCAGAGAATTTAAATGCGGTTTTAAACCCCTCTAAAACATATCCAAATAATGAAGAGTTTCCCTCGCCCACTCCGCCCGATCTCAATGAGAGCCAGGAACCTTTAAGGAAGGCCCAAGAGGCCAGTGAAGATGCTAATAACGCTGAAACGTCCAAATCAGATGCAGATGAAGAAAACGAATCTTTAAATACTTCAGATAACATGTGTTTGAAGGCCACTAACTGTGAAGCATCCCATAAGGAGAACTCCGAAGAAGATGAGCGCGAAAGCACAAAAACGCCACAAATAGAGTCGCCAGCAGGCTTGGTTTCAGACAGTGCTACAAAATCAACACCTAAGAAGGATGTAGAGATGGATGTGACGCCCACAGCATCTACAACACCCTCCTTGCCTGCCTCCCTAGCCCAGCAATATGCTGCTTCTCCCGTCAATATAGAAGCTATTAAAAACATGCAATTGGCTATAGCTCAAGCGGCGGCCAAAACCATAGCTAATGGTGCCTCTGGCCAGGACAATGAGGCTGCCGTCAAACAGTTGGCCTTCTTGCAACAAACTTTATTCAATCTGCAGCAACAGCAACTATTTCAGATTCAACTTATACAACAGCTGCAATCACAGTTGGCCATGAATCAAACGAATGCCGCTGGCGCTGAACAGGCCAATGACATGGATGAAGATGAGGAAGAAGAAGGTGAAAATGGCGAAGAAGATACATATGAGGAGGAGGAACGTATAGCTCAAATGGAGTTGAGGCAAAAGGCAGAAGCCCGCATGGCGGAAGATAAAGCTCGCCAACATCTTATTAATGCTGGTGTACCTCTTGATTCTCTGAAGCGAAAACGGGATGCTGATAATGATGAGGAAATGAATACTTCAGCCTCCCGTCGCCTAAGCATGGAAAAAAGCTCAGGCTATGCTTTGGCTAAGCTAAAAGATATGGAAAACAGACCTTTGCCTTTTGGCTCAAATTTGGCCTCTTCAATTATTACTGATCACGATGATATGCCTGAGCCGAATTCACTGGATTTGTTGCAGAAGAGAGCCCAAGAGGTTTTGGACTCGGCTTCGCAGGGTATTCTAGCGAACAACATGGCCGATGAGTTTGCTTTCAAAGAGAAAAACGGCAAGGCCGGCAACGAACCCTTTTTCAAACACAGATGTCGCTACTGTGGTAAGGTTTTTGGCTCGGACTCTGCTTTGCAAATTCATATCAGATCTCACACAGGCGAACGACCCTTTAAGTGCAATGTTTGCGGCAGCAGATTTACCACCAAAGGAAATTTAAAAGTGCATTTTCAAAGACATGCCCATAAATTTCCCCATGTACCTATGAATGCTACTCCCATACCCGAACACCTGGACAAGTTTCATCCTCCCCTTTTGGATCAAATGTCACCTGACAGTTCTCCCAGTCACACACCTGCCGCTATGCCACAGCAAATGCCCAGCCAAATACCACCCATGAGCTTTGCTGGACCCTCTACCAATTTTCCTGCTCTGGCGAATCTTTACAGGCCGCCCATGGACATACTGAAATCATTGTCTGCTTCTTCAGGGTCCGGATTTAGCAATCCTTTCTTTCCTCATGTTGCCGGCAATTTAGGAGAAGCTGCTGTGCAGGCTCAAGCCGCAGCTCAAGCTGTCTTAAACAAGAATCAGGAAAATGCTGCAGACTTAAGTAAAATTGCCGAACCAAGTTCGCCCACAAACACGCCCATAAAGTCAGAGCTAGCCGAAGAAAAGGAAGACAAGCACGAGGGCAAGGCCAGCAAATCAGCGGCTGCTGTAGATGGTTCCAAAACCTCATCACCCCTACCTATGGATATAAAAATCAAGGAGGAAAAAGATGATTGTGAAATTGTTGAGGAAAGAGTGCACAGCCCGCCACCAGTTGCATCTGCAGTTAGTCCCAATATTTCTACGCACTCATCCTTAGCGAATTCCTTAACCCAAGTACCTAAAAGTCCGCCTGTACCCACCACCTGTAAACCACCCACCACCCAACAATTACCGCCGGTAGTACAACCCATACAACCCCCTGCCCTCCTACATCCCCAGCCTTCTCCAGGCTCTCAGCATCATTTGGATCATTTGCCCACACCGGGACAGTTGCCACCCTCTATGCATCATCGTGACGACTTTTTTGCTGAGCGATTTCCTCTGaactttacaaaaactttatcaCCTGAAAGACATTCGCCCATCAGATCACCTGCACACATACCACGCGCTCCCTTTTTCAATCCCATGAAACCACATGACATGGCTCTACTGCCTCGTCCTCACAGTAATGACAACTCATGGGAGAATTTcatagaaatttcaaattcttcaGAAACCATGAAGCTGAAAGAACTCATGAAAAATAAGAAGATCACCGATCCCAACCAATGTGTGGTGTGCGATCGTGTTTTGTCCTGTAAAAGTGCCCTGCAAATGCACTATCGTACTCATACCGGCGAAAGACCTTTCAAGTGTCGCATCTGCGGCAGAGCCTTCACCACAAAAGGCAATTTGAAAACCCACATGGCGGTGCACAAAATAAGACCGCCCATGCGCAATTTCCATCAGTGCCCAGTTTGCCATAAGAAATACTCGAATGCTCTGGTGTTGCAGCAACACATACGCCTGCATACTGGTGAGCCCACAGACCTGACACCTGAACAAATACAGGCTGCTGAGATACGAGACCCGCCACCTTCAATGATGCCAGGCGCTTTCATGAATCCCTTTGCTGCGGCTGCTTTTCACTTTGGCATGCCAGGTGGACCTGGTATGCATCCTCTGAGTGGCCTACATAATGGCTTGGGCTCGGAGTCCTCCCAGGGAGACTTTGATGATCAAATGGATTGTGGAGACGATTTCGATGACGACATGTCCTCCGACCATATGTCGACTAGCAATGACTTGGAACCAGGCAGTGAACGACCCAAGTCCTCGGACGACTTCAGGGGTTTGCTATTCGAACAAAAACTAAGAATAGATCCCACTGGTGTGGTAAACACGAATCCCCGACCTCAATCTGCGACTTCTAACCCAAACTCAATAAATTCTCCACCCACCAGTCCAGCATCGATGGCAAAACCTTCAAGTTCGACGCGCGCAATATCGCCAGCCAGATCCGAAATGTCTCAAGGCGCCTTAGATCTAACACCACGCGCCGGCCCTTCGTCTGCCAACAGCAGTCTTAGCGCCAGATCACCTTTACCCACCCTCAGCGGTAAACGTTCACCCTCACCCTTGAACAAATCCCCAAAGTTACCGCAAATAAGTCCCTCTGCCGCCTTGCCACCTGCCTCTGCTGTTGATTGCCTGCCCCCCAGTTTGCATCATCACCTgcagcaacaacatcagcagCTGATGCAACAACAAGCTGCCTTAGCGGCTGCtcaacatcatcaacaaatgCAGCACAATGCCGTCGTTGCCATGCATCAAGAGCAATTAAGAAGAGAAGCTGCTGCACATGCGCAACTCTCACCGAATACACCACAATCGGTGGCACAACACTCACCTTCTGGCCAGCCGTCTGGCTCACCGCAAATACCCCATCCCCAAGCACCAAATCCCTTAGTAGCTGCTGCTCGACCACCATTCGGCATGTTTCCAAATCTCCCGCTGTTTCCACCGGCCTCCACGCAAAACATGTGCACCGCCATGAATTCTATTGCCCAGTCTGTTATGCCGGCGGCACCATTTAATCCTTTAGCTCTATCGGGAGTCAGAGGCAGCACTACTTGCGGCATTTGTTTCAAAACATTCCCCTGCCATTCGGCTTTGGAGATTCATTATAGAAGTCACACTAAAGAGAGACCATTTAAATGCAATATATGTGATCGTGGCTTTACAACAAAGGGCAATTTAAAACAACACATGCTTACTCATAAAATACGTGATATGGAACAGGAGACCTTTCGAAACAGAGCAGTCAAGTATatGAGTGGTGGCAAGGAAGATTGA
Protein Sequence: MSCRLDSASDHEENGTCSPLAATTANEDSDCDRAELTHMAASNELVNKINTTPAEADKQQPQQTSAAGLSVTEGATAAAAEAAEEEEKEEDLNHNNNLVMPMEEHQQQQQQQQKQQELKKIQSPAHAENLNAVLNPSKTYPNNEEFPSPTPPDLNESQEPLRKAQEASEDANNAETSKSDADEENESLNTSDNMCLKATNCEASHKENSEEDERESTKTPQIESPAGLVSDSATKSTPKKDVEMDVTPTASTTPSLPASLAQQYAASPVNIEAIKNMQLAIAQAAAKTIANGASGQDNEAAVKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLAMNQTNAAGAEQANDMDEDEEEEGENGEEDTYEEEERIAQMELRQKAEARMAEDKARQHLINAGVPLDSLKRKRDADNDEEMNTSASRRLSMEKSSGYALAKLKDMENRPLPFGSNLASSIITDHDDMPEPNSLDLLQKRAQEVLDSASQGILANNMADEFAFKEKNGKAGNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAHKFPHVPMNATPIPEHLDKFHPPLLDQMSPDSSPSHTPAAMPQQMPSQIPPMSFAGPSTNFPALANLYRPPMDILKSLSASSGSGFSNPFFPHVAGNLGEAAVQAQAAAQAVLNKNQENAADLSKIAEPSSPTNTPIKSELAEEKEDKHEGKASKSAAAVDGSKTSSPLPMDIKIKEEKDDCEIVEERVHSPPPVASAVSPNISTHSSLANSLTQVPKSPPVPTTCKPPTTQQLPPVVQPIQPPALLHPQPSPGSQHHLDHLPTPGQLPPSMHHRDDFFAERFPLNFTKTLSPERHSPIRSPAHIPRAPFFNPMKPHDMALLPRPHSNDNSWENFIEISNSSETMKLKELMKNKKITDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGAFMNPFAAAAFHFGMPGGPGMHPLSGLHNGLGSESSQGDFDDQMDCGDDFDDDMSSDHMSTSNDLEPGSERPKSSDDFRGLLFEQKLRIDPTGVVNTNPRPQSATSNPNSINSPPTSPASMAKPSSSTRAISPARSEMSQGALDLTPRAGPSSANSSLSARSPLPTLSGKRSPSPLNKSPKLPQISPSAALPPASAVDCLPPSLHHHLQQQHQQLMQQQAALAAAQHHQQMQHNAVVAMHQEQLRREAAAHAQLSPNTPQSVAQHSPSGQPSGSPQIPHPQAPNPLVAAARPPFGMFPNLPLFPPASTQNMCTAMNSIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMSGGKED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00045570;
90% Identity: -
80% Identity: -