Basic Information

Insect: Sturmia bella
Gene Symbol: -
Assembly: GCA_963662145.1
Location: OY759172.1:7710004-7718906[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.8 1.9e+02 3.2 0.8 2 23 411 433 410 433 0.93

2 10 0.015 0.98 10.4 0.1 6 23 443 460 443 460 0.99

3 10 8.7e-05 0.0057 17.4 3.6 1 23 466 488 466 488 0.99

4 10 2.2e-05 0.0014 19.3 2.2 1 23 501 524 501 524 0.92

5 10 7.9e-05 0.0052 17.6 1.9 1 23 532 555 532 555 0.98

6 10 2.1e-05 0.0014 19.4 1.4 3 23 563 584 561 584 0.92

7 10 0.02 1.3 10.0 0.4 2 23 596 618 595 618 0.96

8 10 0.00069 0.045 14.6 6.2 1 23 625 648 625 648 0.93

9 10 2.3e-06 0.00015 22.4 0.7 1 23 654 676 654 676 0.98

10 10 0.00013 0.0084 16.9 1.3 1 23 682 705 682 705 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.8	1.9e+02	3.2	0.8	2	23	411	433	410	433	0.93
2	10	0.015	0.98	10.4	0.1	6	23	443	460	443	460	0.99
3	10	8.7e-05	0.0057	17.4	3.6	1	23	466	488	466	488	0.99
4	10	2.2e-05	0.0014	19.3	2.2	1	23	501	524	501	524	0.92
5	10	7.9e-05	0.0052	17.6	1.9	1	23	532	555	532	555	0.98
6	10	2.1e-05	0.0014	19.4	1.4	3	23	563	584	561	584	0.92
7	10	0.02	1.3	10.0	0.4	2	23	596	618	595	618	0.96
8	10	0.00069	0.045	14.6	6.2	1	23	625	648	625	648	0.93
9	10	2.3e-06	0.00015	22.4	0.7	1	23	654	676	654	676	0.98
10	10	0.00013	0.0084	16.9	1.3	1	23	682	705	682	705	0.97

Sequence Information

Coding Sequence: atggtggtTAGATGCCTTCTGTGCTTGGAAAGCCCGACAATACCGGGcccaaaatttttagaaatatttggagaagaaGGTCTGCGCTTGGACATTTGTTCGATTATAAATAAGCATTTTTGGTTAAAGACAAACAGGAACAGTGAAGATGTACAACAAGTTTGTTTGACATGTTGGGAAGTTGTAAGAGACTTTCATATACTATACCAGAGGGTTGAGGATGCTCATAAACATTTAGAAGTTAAAACAATAGAATTGGACGATCCTTTACCTCAAGATGTTATGCCCAAGTCGGAAGACGATCAAGATCCTATTATGGGAGATAATGGACTAGGCGACTCTATATTTGATCCAGAAGTGAAAGTGGAAGTACATGATTTGGATTTGTTGCCACAAATAGAAATACTAGAATCAGCTAATGTGCCGGAAAGAGCACCACGGTCAGGAAGGCGAGGACGACAGCCAGCTAGAGAACACAGTCCAAAATTATCCGCCAAACGCATTAAGAAAGAACAATCTCCTGCGGCTGATACAAGTCAATTTGAGTTTGGTTCAGCTGAAAATCCTAAAAAAGACGTCTTGAGCGATTCGGGCTCTTTAGAAGACTTGAGTCACACTCAACCCTCGAATTCGATTGATGTTGAAGAAAGCAGTAATAAGAAAAAAGGCAGGCCACGAAAATCGAATGTAGCTAAAGCTAAAGCAACCATAACCCGTACTAAACGctcaaaaaaacagcaacagacGCCACTCCAAGTAGCAGATCCAGatatcaaaaatgaaaaagaaacagaGGAACAGCCCTCATGTTCAAATGCACAATTTCCGCCCGACCTTGCGGCggaaccaaaaattaaaatggaaaccGCAACGGAGGAGCAAACCTCAAATAACTTCGTTAGTGAACCAGAAAACGTGGAGGATGACGAATATACGCATGATGATTTTGATGAGGATAACGACAATGATAATTACACCAAGGAATCCGAAGGATCTTCGGAATCTGAATCAGAAGGAGACGCATCCGAAGGTTCTGATTGGAATGAATCTAGAAAAAAGAGTGAAAAGTTTGCTGTCATCACGAAAAAAGAACGGAATGTTcctagaaaatataaaaaacgagAAAAGCCAACAGTAGAACCTAAACGCTTGAGCCGCGAAGAAATTGAAGCCCGTCAAGCTCAACAGGCTGAATATGACTCTATTATaacaaaattctttgaaaaactaCGCTGTCCCAAGTGTGAACTTTTAGTACATACGTTTGGCGAAATGCGAGCACATTTCCGTTCAGATCATGGTGATGATCATGGTTTTATAGAATGTTGCGGCCGCAGATTTGCCACTCGCAAGTTTTTGGCTGAACACATAATGGTTCATTATAATCCCAACCACTTCAAGTGCAAAACATGCGATAAAATTTGTCGCGATTCTACACAACTGGAGAGTCATGAACAAACTCATTTGGCTAATCCACCACCATCGAAATACAAGAAAACGTTCCAGTGTGAAAAATgctcaaaaacattttcatccAAAGCTGCATTCGAACATCACATGGTAGCAAAACATGTACCGCgagaagaatttaaatttgaatgtcCTGAATGCAAGAAAAAATGTCCCACAGAAACAAAACTCAAGGATCACTTGCGCAGCGTACATGATCCACAGAGAACTGTTATTTGTGATAAATGTGGCAAAGTATTTAAAAGTACCTATAGTCTTAGAAAACATCATGAACTAGAACATTCGGATGTGCCCAAACCGATACCCATTCCGCAACAGTGTGAAATTTGTGGAGCCTGGCTCAGACACTTGTCCGGCCTGAAGCAACACATGAAAAATATACACGAATCTGTACAGACAGAACATCGTTGCCATATTTGCAATAAAGTATCATCGACTTCTAGAGCACTCAAAAGGCATATATATCATAATCATGAGTGTGTTCGAAAATTCCAGTGCACCATGTGCGACAAGGCATTTAAAAGAGCTCAAGATTTAAGgGAACATACTTCTGTGCATACGGGTGAAGTATTATATACCTGTCCCAATTGTCCCATGACATTCTTTTCGAATGCCAATATGTACAAACATCGACAACGCCTGCATCGCGCAGAATGGGAGGCAGATCGAAGTAAACCTATACCGCCGAACATAATGAAACAGGCAAAACAGGGTAGCAAATATATTAAAGTTGTTAAACGGGCTGCTGGCGAAACAATTCCACCCCAGTTGGTTACACCAATGCCTATTATACCGCCGTCAGCAAACGCTCTACATTCGGTTTTAAATCCTCAAATATTGTATGCAAACATGACACTACACTGA
Protein Sequence: MVVRCLLCLESPTIPGPKFLEIFGEEGLRLDICSIINKHFWLKTNRNSEDVQQVCLTCWEVVRDFHILYQRVEDAHKHLEVKTIELDDPLPQDVMPKSEDDQDPIMGDNGLGDSIFDPEVKVEVHDLDLLPQIEILESANVPERAPRSGRRGRQPAREHSPKLSAKRIKKEQSPAADTSQFEFGSAENPKKDVLSDSGSLEDLSHTQPSNSIDVEESSNKKKGRPRKSNVAKAKATITRTKRSKKQQQTPLQVADPDIKNEKETEEQPSCSNAQFPPDLAAEPKIKMETATEEQTSNNFVSEPENVEDDEYTHDDFDEDNDNDNYTKESEGSSESESEGDASEGSDWNESRKKSEKFAVITKKERNVPRKYKKREKPTVEPKRLSREEIEARQAQQAEYDSIITKFFEKLRCPKCELLVHTFGEMRAHFRSDHGDDHGFIECCGRRFATRKFLAEHIMVHYNPNHFKCKTCDKICRDSTQLESHEQTHLANPPPSKYKKTFQCEKCSKTFSSKAAFEHHMVAKHVPREEFKFECPECKKKCPTETKLKDHLRSVHDPQRTVICDKCGKVFKSTYSLRKHHELEHSDVPKPIPIPQQCEICGAWLRHLSGLKQHMKNIHESVQTEHRCHICNKVSSTSRALKRHIYHNHECVRKFQCTMCDKAFKRAQDLREHTSVHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEADRSKPIPPNIMKQAKQGSKYIKVVKRAAGETIPPQLVTPMPIIPPSANALHSVLNPQILYANMTLH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00742164;
90% Identity: -
80% Identity: -