Sbel009280.1
Basic Information
- Insect
- Sturmia bella
- Gene Symbol
- -
- Assembly
- GCA_963662145.1
- Location
- OY759169.1:71189436-71196266[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.76 50 5.0 0.6 1 23 280 303 280 303 0.92 2 12 0.4 26 5.9 0.2 2 23 382 404 381 404 0.95 3 12 0.00014 0.0092 16.8 1.0 1 23 896 919 896 919 0.97 4 12 0.055 3.6 8.6 0.2 1 21 956 976 956 979 0.88 5 12 0.00066 0.044 14.7 1.2 1 23 984 1007 984 1007 0.97 6 12 0.00067 0.044 14.6 1.8 1 23 1279 1301 1279 1301 0.98 7 12 0.00059 0.039 14.8 4.4 1 23 1307 1329 1307 1329 0.97 8 12 0.00056 0.037 14.9 2.8 1 23 1335 1357 1335 1357 0.98 9 12 1.6e-07 1e-05 26.1 0.4 1 23 1363 1385 1363 1385 0.98 10 12 5e-05 0.0033 18.2 0.9 1 23 1391 1413 1391 1413 0.98 11 12 5.6e-05 0.0037 18.0 4.5 1 23 1421 1443 1421 1443 0.99 12 12 0.00018 0.012 16.5 0.2 1 23 1449 1472 1449 1472 0.97
Sequence Information
- Coding Sequence
- ATGATCAACACTTTGCTGGAGCATGTGCCGATTAAAATGGAGGTGCAAGAAATTGAGGAAAATAACGGCATGCCCGTTCATCCGCCACAACACGACGGAGCAGCCCAAGATGTTGATGAAACAGATGACGAAGTGGTTACGGAAGGCAGTGAAGTTGAAGACGACGACGACGAAGATGATGTGGACGAGGAAGAAGAGTCAGATATTGAAACGGATGCCTTGGAAATTGAAAAGGAGGCTACCATGTTGATAAGCAGTGATGAAGAAGCTGAATTAGAGGCTCAACGAATACGCTTTCCTGATATTagcatcacaaaaaaattacgCAGAGATTCCAACATATCTTTAGCCAGCTCTTCTAGAAGCAGCCAAACAAGCAGTTTTTGCTCTCAGCCACATATTACCTAcgaaattgttaaacaaaaagaCTGCACAATGGAGGGAGCAGacaataaacaaagaaattcaCCTCGCCTAAAACATATGGAGAACAAAACTTTGGAGAGCCACAATAAAgagaacaacagcagcaacaacaaaagcatgCTAAAACAGAAAacggaaaacaaaaacttggaaagtagtaataaaattttggaaGGCAGTAAAACCAAATCggaagaagccaacaaaaatTTGGATAATCAGAAAAATTCTGAGAATAATCGtaaaaaggaaaattgtttaaaatcgCCGCCTGTAAATGCTGGTGAGCAGAAAAGTCGCCGAGGCAGCAGTAATTCCACTTGCAGTGTTGCCTCCACAGTGGCCTCTGACGGCGCTGAAACAGAGTCTTGTGGCAACATTTATGTGTTCAATTTGGAACAGAAACTTATATTTAACTGTGAATTTTGTGATCTTAAATACGGGGACTTGGATAATTTCGGTTTACATCTGCACGAAGCTCATAAGCTGTTCAATATCGACGAAGACcctgaaaaagaaaatgctcCACGTAATTTGGGCAAAAATACTCGACAGGCAAAGAGTGTGGCAAAAAACTGTGTTAGTGTTAAAAAAGAGCCCTTGCAGTGTCCAGAACTAAAGGCTGAGCCGCCCATTGCGTTGCCGCCTTCAGCTTTGGCAGAACCTCTAGATTCCTGCGGCAATGTGTTTATGCTTAATCATCgtaaattatttttggtctgCGGCTATTGTGAGAGTAAATATGCCAATTTGGAGGTGTTTGAGAAACATTTGAGGCAACAACATCGTATATTTGAGGGCTGCCACAATGAGGTGAACGTTGTGCCCAAGGTGGAGGTGAAAGAAGAGGTGCTTGCCGTTGCCGAAATTGTAAACACATCAGATATTATAATTCCACAAGCTATGGTAGCCATACCAGCTGAAATTCCATTGAATATAACGCCtgaaaatgaacaacaaattgTAGCTGCCTCCGAAAATGCAGCTATTGCACAAGAACCAACTGTTCAGAAGAAAGATATTGCAAGAGAAGAAACAACTATTGTGCCAGAAACAGTTGATCCAAAAGAAAATTCTGCTTCGCAAGAAATTCTTGTTGAGAACGAAGCAACAGCTATGAAAGTAACAGCCGACCATTGTGCTAAACATGATAAAGAACAGAAATCTATGAAGAATATTACCCAAGAACTTGCAATTGCTAAAGTAAAGGCATCCGGTGAAGAAGTGAGCGTTAATGCTGCAGAGACAGAAACcaaacaaaagttgaaaaatgaGAACAAGGTGGCAACTGTTAAGCAAAAATCAAGCAATAAAAGATCTTCTTGCTCAGACAAGCAATCAGAATCGCTCAGTAAACGGTCGAAGAAAAAGACAAGGAATAATAAGCGACATGAACAAAAGtcaCCTGCCCTTCCGGAAACAGACATTCGACCCTCAGCGAAAGCCTTAGAAACTGTTCCAATTGTGGAAAAAGAAAGCAGCACAAAACTTACCCAAACTGTAGAAACTCCAGATAATAACCCATCCACAATATCACGACAAACATTAAAAGAGACTGCTGCTGAAATTGCAACTCAAGAAAACACCTACGAATCAAAAGAATGTCTAAAGGCTGAGAATGATACAGCTGTGAAAAAATCACCAACCagagaattaattaaaataccaGAATTGGAACAAAATACACCAGTTATGCTAACGGACACCGGAGAGACGGAAGAAGCTACCGGCATTGAGATAGTACCGGTAAAATTGACAAAAGTCGTAGAAACAAGAAAAACTGCTGAGCCTGAGAAAAAGACTTGTGTGACATTGACAAAAACCAGAGAGACCAGAAAAAGAAAAGATGCTGACGCACCAGCCGATAATAAATTTGCAGAAACTAAAAAAGCAGTAAAATCGAGGGAAGCTGAGAAAACAAAGCATTTAATGCTGCCAGAACTCGCAGGAGCCGGCAAAGCCAAGCAATTTGATAAAATAACATTGGCAGAGGCAGAGCCCAAGAAAACCACAACTCTTAAATCGAAAATACCCAGAGGGCCAAAAAAAACTAGGTGTCATGAAAAAGCCACATCTCTaaaaaatgcagcaaaaatGAGAGAAACCAGAACAACAACGAAACGTAATGCAGGCGACTGTACAACAACTGAAGTTGTGGAGCTGAAAAAACCACTGCCTTCGAGTGCAGAGAAAAACAAATCATCTCTATCGATTGAAAGTAAGAATCTTGaagataagaaaaagtttgaaactaaaaaatatcaatgctCAATCTGCTATAAAGAGTTTACCCGGCGGAGAACTTTAATTTTGCACGAAAGTACTGCACATCCAGCGGGCTTCAGAAAAATTTATGGCTGTGGCATTTGTAATCAGGGCTTTTTGGATGAACATGAACGCAAAAGTCACATGTTCCAGCGCCACAATGCCCACATCTATTTCGATTGCAACCTCTGCTATCGGGCCTACAGTGCAAAGGGTGACCTAGAACGTCACAATGAGGAAGTTCATGAGGTCAAAATCTATAAATGCGGTGAATGTCTGCGAACTTACAGTTCAGAGCGCAGCTTAAAAGCTCATCTTTATACTTATCATAATGCAGCCATGAAACGAGCAATAGCAAAAAATAGAAAGACCAACTCTggtcaaaaacttattttaactaCAACGATACAAAAGGAGCCACTGCCAGTAGCAGCCGTCGTCGCTCAATTGGACACTGATGTAAAGGACGAAGTAAAACTTAACTTAGCCACAACAATGCCAAAAGAGTCAATGCAAGCAGCTGCTGCTGCTCAAttggaaaataatgtaaagaatGATGATGTCAATGGCAAAACAGCTTCTGTTGTTGTGGCAGCAGCAGTGCCAACAGCAAGTTCGACCATGATTTATGCCCTTGACAATATTAATACCAAACCAATTGATATAATTGATGTACAACTCTCAAATGTACAATTAGCCAACCTAACAGAAATAACAGATACTTATGGTCTCAATTCTACTTCCAATAGTACagaacaaataatttatgtttctgATCTCAATGGCGAACCGGCTAATCGTGAAATGGTGGTGGAAATAGCAACGGAAAATACAGCTCTTAAGGCTCTGCCAATTGAAAGTGAAGACACAACAAAATCGTTGGCGTCCACTGCAGTAGCCTTCGGCGCCGAGTATGAACGAGACGATCGTACTGCCGATCCAGTCAATGACATCATTGCCCAGCTACAAAACGAACTGTCAGAAAGTACATCATCGGAGACCAGCAATATGGTTACTTATACCATAAACGCTCTACCAAATACCGATGAAACTCAAAAGGCTGCTGCCTTAGACTCCGCCCAGCTTAGTGCTGTGGACAAAACTGAGGATGTTAAGCCgacatttttgaaaatcatCAAACACTTTGTGTGCGATGTTTGCCCCAAGACCTACTCCAAGCACTCAAGACTGATCGAGCACAAACGTTTGCATACGGGCGAAAAACCCTTCAATTGCGACGAATGCGGCAAACATTTTCGCACCCGAAATCGTCTCAACGAACACAAGCAACGGCATTCCAAAGAGAGGAATTTCAAATGCGAAATCTGCCTGCTGTCGTTTGTCACCCGAAATGATTTTACTCTGCACATGCGTCATCATAACAACGATCGCCGTCACAAGTGTCCGGTGTGTGGCAAAGCCTTTGTGCGCAGCTCCGATCTGAAGATACATGAACGCATTCATACCGGCGAGAAACCGTATGTATGCgatgtttgtaacaaaagttTCCGGGCCAATCAGAATCTGAGCGTTCACAAAAAGTCCCATATGGGCGatgtttcaaaaacttttcaatgtGAACATTGTGACAAAAAGTTTATGCGTAAAATAGACCGTAAAGTGCACATGCGAACACATACGGGCGAAAGGCCTTTCAAATGCGAGATATGCCAACGCGCCTATTCCTCCAGGGTCAATGTACGAGCCCACATAGATCGAGATCATGTGAAGGGTGGCAACGAAGAGAAAAAGAAGCCAGGACCTAAAACACGTTCTCTCATAGCCGAACTGGAGCGACAAAAAAAGCTGATAGAGGAATTGCAAAGTCAACTGCTGCAGCAAGTGAAAAAGGacgaaaaagaaacaatttccGATGAGGAAATGCAGCCAGAGCACATACTGCCCGATTCACACATAAAAGTATCTTCGCCCATCGCAATACCACCAAACAGCGCCACCAGAAATGACATCGTACAAAGTGCCTTCAATCTGATGGTGGACAAACTGAAAGCCTCCTCGTCATCCACAGCAGCCGCCAGCCCCACAACTACCTCTAAGTCTTTGACGGTCATACCCTCGCCACCTCTCTTAGATGAACCCAGCTCTCCATCgtcgccaccaccaccaccaccacttaCTCCTAATGCTAAAACAGACTCTACTACCACTTTACTACCTCTTACTATAACACAAACCGTAGAACCAGCTTCACCAGCTGCAGCTTCCACTTTATGTCTTGCttcgccaccaccaccacccctAACATCCAGTGCTGATGCCACCGCCACCGCCACTGCCACTTCATGCCTGGTTAAGCACTCAAGACAGCCAACGCCCACATCGCCGCCAGCAGCTGCTGCAGCCGCTAAAACTACATCGGCCAAGGTTGTGTCACAAAAGACCTCCCTGGGCGGCATACAACAAGTATCGGTAACAGTTTCCATGCAAGTTGAAAATGTTGCCGCAAATCCAAACACCGCTGAAAAAGACAACGCACAGTCTTTAAGCACATCGCCCAGCGACAGTGCTTCGAGTgttaaaaaggaaagaaaaattacaagttaCTTTACGGTACTAGACCAGAAATCAAAAGGTTAA
- Protein Sequence
- MINTLLEHVPIKMEVQEIEENNGMPVHPPQHDGAAQDVDETDDEVVTEGSEVEDDDDEDDVDEEEESDIETDALEIEKEATMLISSDEEAELEAQRIRFPDISITKKLRRDSNISLASSSRSSQTSSFCSQPHITYEIVKQKDCTMEGADNKQRNSPRLKHMENKTLESHNKENNSSNNKSMLKQKTENKNLESSNKILEGSKTKSEEANKNLDNQKNSENNRKKENCLKSPPVNAGEQKSRRGSSNSTCSVASTVASDGAETESCGNIYVFNLEQKLIFNCEFCDLKYGDLDNFGLHLHEAHKLFNIDEDPEKENAPRNLGKNTRQAKSVAKNCVSVKKEPLQCPELKAEPPIALPPSALAEPLDSCGNVFMLNHRKLFLVCGYCESKYANLEVFEKHLRQQHRIFEGCHNEVNVVPKVEVKEEVLAVAEIVNTSDIIIPQAMVAIPAEIPLNITPENEQQIVAASENAAIAQEPTVQKKDIAREETTIVPETVDPKENSASQEILVENEATAMKVTADHCAKHDKEQKSMKNITQELAIAKVKASGEEVSVNAAETETKQKLKNENKVATVKQKSSNKRSSCSDKQSESLSKRSKKKTRNNKRHEQKSPALPETDIRPSAKALETVPIVEKESSTKLTQTVETPDNNPSTISRQTLKETAAEIATQENTYESKECLKAENDTAVKKSPTRELIKIPELEQNTPVMLTDTGETEEATGIEIVPVKLTKVVETRKTAEPEKKTCVTLTKTRETRKRKDADAPADNKFAETKKAVKSREAEKTKHLMLPELAGAGKAKQFDKITLAEAEPKKTTTLKSKIPRGPKKTRCHEKATSLKNAAKMRETRTTTKRNAGDCTTTEVVELKKPLPSSAEKNKSSLSIESKNLEDKKKFETKKYQCSICYKEFTRRRTLILHESTAHPAGFRKIYGCGICNQGFLDEHERKSHMFQRHNAHIYFDCNLCYRAYSAKGDLERHNEEVHEVKIYKCGECLRTYSSERSLKAHLYTYHNAAMKRAIAKNRKTNSGQKLILTTTIQKEPLPVAAVVAQLDTDVKDEVKLNLATTMPKESMQAAAAAQLENNVKNDDVNGKTASVVVAAAVPTASSTMIYALDNINTKPIDIIDVQLSNVQLANLTEITDTYGLNSTSNSTEQIIYVSDLNGEPANREMVVEIATENTALKALPIESEDTTKSLASTAVAFGAEYERDDRTADPVNDIIAQLQNELSESTSSETSNMVTYTINALPNTDETQKAAALDSAQLSAVDKTEDVKPTFLKIIKHFVCDVCPKTYSKHSRLIEHKRLHTGEKPFNCDECGKHFRTRNRLNEHKQRHSKERNFKCEICLLSFVTRNDFTLHMRHHNNDRRHKCPVCGKAFVRSSDLKIHERIHTGEKPYVCDVCNKSFRANQNLSVHKKSHMGDVSKTFQCEHCDKKFMRKIDRKVHMRTHTGERPFKCEICQRAYSSRVNVRAHIDRDHVKGGNEEKKKPGPKTRSLIAELERQKKLIEELQSQLLQQVKKDEKETISDEEMQPEHILPDSHIKVSSPIAIPPNSATRNDIVQSAFNLMVDKLKASSSSTAAASPTTTSKSLTVIPSPPLLDEPSSPSSPPPPPPLTPNAKTDSTTTLLPLTITQTVEPASPAAASTLCLASPPPPPLTSSADATATATATSCLVKHSRQPTPTSPPAAAAAAKTTSAKVVSQKTSLGGIQQVSVTVSMQVENVAANPNTAEKDNAQSLSTSPSDSASSVKKERKITSYFTVLDQKSKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -