Sbel018566.1
Basic Information
- Insect
- Sturmia bella
- Gene Symbol
- -
- Assembly
- GCA_963662145.1
- Location
- OY759172.1:25756112-25758253[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-10 7.8e-07 29.1 0.0 1 41 15 55 15 58 0.93 2 2 2.9 5e+03 -2.3 0.1 1 10 422 431 422 433 0.83
Sequence Information
- Coding Sequence
- ATGAATATGGGAGACAAAAGCAAGAGGCCAATGCACCAATACACGGAAGACAGTCTGAAAAATGCATTAGCCGACATAAGGCAAAATTTTATGCCAATATCAACTGCTAGTAAAAAGTATGGAGTTCCCCGATCAACTCTACAGGATCGTATCCATGGTCGCGTTGCGGAAGGGCCAAGAAAAATGGGTCCAAAAACTGTGTTAACAAGTGCAGAAGAAGATCGCTTAGTTAAATGGTGCCATGATTTGGCCAAATGTGGGTTTCCCCCGAAAATGAATGATCTGCTTAATACTGTTCAGGGAATAATTAAAGAAGATTCGAGGGAGACACCATTTATAAATGGTCGGCCTGGGAAGAAGTGGTTCTCTTCATTTATGAAACGCCATCAGAACTTAGCTTTTAGAGAAGCAGAAGGTATTTCTATGGGAAGAGCAGTGGTAACTGAAGAGAACATAAGGAAATGGTTCGcagacttaaaaaattttcttagcgAAGAACATGCTTTGGATATTTTGGAAGACCCTTCAAGAATATTTAATGGTGACGAAACCAGTTTTAGCATGTGTCCAAAAACAGGGAAAGTTTTGGCACCAAAGGGATATCGAAATGTTTATTCCATTCAACGTGGAAATGATAAAGAGACGATCACTgtgcttttagttttttctgcAAATGGTGAAACTGTATATCCAATGGTTGTCTTTCCTTACAAGCGGCCGCCAAAAGATGTTGTGAACAGTCTACCAGAGAACTGGATTTTGGGAAGGTCAGATAGCGGATGGATGGtaagtgaaacattttttgagtACGTCACGAACGGATTGCATCATTGGCTCAACGTAAAAAATGTGAAACGGCCCATTTTGCTACTTGTTGATGGCCACAGATCCCATATGACGATGGAGTTGAGCACATTTTGTGGTGAAAATGGTATTATTTTATACGCTCTTCCCCCGAATACAACCCATATTACCCAACCGGCCGACGTGAGCGTTTTTAAACCTCTTAAGTCCGAATGGAAAAAAACAGTAAGGGAATGGCAGCTCAaaccagaaaatattaataatactgTTTCTAAATCAACGTTTTGCCCACTTCTTCAAATGGTTGTGAGCAACCTGGACATAACGGAAACTATAAAGAATGGTTTCAGAAAGTGCGGTTTGTACCCTTTTAACCCCGACAACGTGGATTATACGAAGTGTGTACGAAATCAATTTGAATTATTAACCACTAATCGTGATGATATACACAAAAATTTGAAGGAAACTGACTTAGACGCAGCCATTAGAGTTATAAATCATATAGCCCCGAATCTTCTTGAGCGTGGAATAAATTCTGAGCATATTCTTCATGAAATTAATATCTTAAAAAGAACAGGAAATGTCCAAGATATTGAAATATTGGGAAATGAAACTATTCAGTCAGGAACATATGTTATAAACGAAGAAGGAGTTTTGGAAATGGAGGCAAACGGAGCAGAAACTCTTGGCTCAGTAAAAAATACCAGCATCGCAACAAACAATAATCCATTCCAACCAATTGAATGTTCATCTCCAATTGCAGCAAATTTGTCGAAAAACAACTCTTTTGAATCTACGGACTGCCCTTCCCCAGGCTCAGCAATTATAAACtcatttattaacaataatttgttAACACCCATTAGTAGTTCCCCAATCTCAAGTGCCATATCTTTGATcagaaatgaagaaatattaGTATCACCTACTTTCGAGAAACATTTGTATTTTCCTACAACGCCAAAAAGTTTATCCTCGCGACCGTTAAAAACTAGAATGCCTAGCGCTATATCAGCTCTAGCATGGAGAAATCACTTTCAGTCGAAAGAAAATGCGAAAAAGTTGGTGgctaatgcaataaaaaaacggAAACTAGAACGGGAAAAGAGAAAGGAAGAAAAAAGAAGGACAAATTTAAAGCCCAAAAGAGCAAAACCAAGACAATTGTGCGGTACATGTGATGACGAGTTAGATACTGATGCTGACGATGACGATTTAAAACATGTTGGATGCGATACCTGTCCTAAATGGTTTCACTTCAAATGCACTGGCTTGCAAAATGTGAAATACAATGAACTAATTGAAACAGAGTTCATATGCAAAGCATGCAGTAATTAA
- Protein Sequence
- MNMGDKSKRPMHQYTEDSLKNALADIRQNFMPISTASKKYGVPRSTLQDRIHGRVAEGPRKMGPKTVLTSAEEDRLVKWCHDLAKCGFPPKMNDLLNTVQGIIKEDSRETPFINGRPGKKWFSSFMKRHQNLAFREAEGISMGRAVVTEENIRKWFADLKNFLSEEHALDILEDPSRIFNGDETSFSMCPKTGKVLAPKGYRNVYSIQRGNDKETITVLLVFSANGETVYPMVVFPYKRPPKDVVNSLPENWILGRSDSGWMVSETFFEYVTNGLHHWLNVKNVKRPILLLVDGHRSHMTMELSTFCGENGIILYALPPNTTHITQPADVSVFKPLKSEWKKTVREWQLKPENINNTVSKSTFCPLLQMVVSNLDITETIKNGFRKCGLYPFNPDNVDYTKCVRNQFELLTTNRDDIHKNLKETDLDAAIRVINHIAPNLLERGINSEHILHEINILKRTGNVQDIEILGNETIQSGTYVINEEGVLEMEANGAETLGSVKNTSIATNNNPFQPIECSSPIAANLSKNNSFESTDCPSPGSAIINSFINNNLLTPISSSPISSAISLIRNEEILVSPTFEKHLYFPTTPKSLSSRPLKTRMPSAISALAWRNHFQSKENAKKLVANAIKKRKLEREKRKEEKRRTNLKPKRAKPRQLCGTCDDELDTDADDDDLKHVGCDTCPKWFHFKCTGLQNVKYNELIETEFICKACSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01074403; iTF_01398414;
- 90% Identity
- -
- 80% Identity
- -