Sbel020283.1
Basic Information
- Insect
- Sturmia bella
- Gene Symbol
- bab1
- Assembly
- GCA_963662145.1
- Location
- OY759172.1:50418921-50423112[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-12 1.5e-08 34.6 0.0 4 45 419 460 416 460 0.91 2 2 5.5 9.5e+03 -3.2 1.2 4 20 555 570 555 570 0.84
Sequence Information
- Coding Sequence
- ATGGGTGGCCCACCAGTTTCTGCGCCCTCCAACGGGCCCCCAGAGGGCCAAACCTATTGCCTACGCTGGAACAATCACAAATCAAATTTAGTAGAAATATTAGACTCTCTTATCAAAGTCGAAAGTTATGTTGACTGCACCATAGTGGTGGATGATCAAGTGCAATTTAAAGCCCATCGTGTAGTTTTGGCTGCCAATTCACCCTATTTCCAATCTATTTTACAGGATGTGCCCATGGATCATTGTAGCATTTTATTTCCGGGGGTGAAAGCGTTTGAAATGCGTGCATTGCTAGAGTACATGTACACGGGGGAAGTGAATGTTACACAAAGTCAAATACCCAAAATAATGCGCATTGCTGAGGAGCTGGAGGTCAAGGGACTTTTCGATATGGCCGATTTGAAAGAAAAGTTCAACAAATTAAGTGAAGAGCATGCTGAAAGATCTGCCAGTAATCCTTATGCCAGTACAACAGCTCCCTCTAATCCCTATTCCTCTGTTACCACTTCCACTTCGCCGCCTTCTAACTTACCTAACCACAAATCTAGCTGCTCCAAGGACTCTGACAGCTATCACAATAGTTCCTCCCAAGTTATTTCTACCTcaacaaatatttcaccaaCGGCTGCTCCCTCAAGCAGCTCATCTCCCCCCTACGCCAATTTCAAATCACCCTATTCCAGTTTGTACAACAAATCGCCAGTGCCCCATGTACAGCCATCCTCGCAGACTCAAGCTCCAGCCAATCAGCAACCTCCTAATAATCTAACACCCACTAGTGAACATTCTCCCCAGTGGTCCATGTCCCCCTCGGCAGCTGCTGCGGCAATGTTAAGTTCTGTTTATGAGTCAGCTGCCGATATGAATCCTTTGAAACGCAAAAAACTCTCCTCCATGTCCAGCATGCTGATGAGTCGTGACACCCCAATTTTGCGCAACGTCTTAGCCCAAGCCAATCCAGCGGACTCATCCCAACAATTGCCTCTTATGCTGCCCAATTCGGCTGCAaatattaaaatggaaaaatcttcaaacgCAGAAAAGAATTTAAGTGGTCATAACAACAATCACAGCTTTAATGGTTCCGACTATGGGGACAAGAAATACCCAGATGGACTGCATTCCCCATTTACGGATCGCTCTTTTGAAGATGACAACTTTGAGCAACAAAAAGGTGGCATGTTGGCTAGTAGCTTTAGCAGTACACCCAACCAAAAACCGGAATGGAAACGTTACAAACAATACACGCGTAGCGATATCATGTCTGCCATACAGTGCGTGCGTGAGGGAATGAGTGCTTTGCAGGCTTCGCGCAAATTCGGTGTACCCTCACGTACGCTTTACGATAAGGTAAAGAAGCTCGGTATAACCACCGGCCGACCAATGAATCGCACTCTGAAACGTAGTCCCAGTAGTGTAGAGTCGCCAGCAGCTTTCCCCTATGCTCATGGTTATGGTCAAGCTACGTCATCCAGTGCTGTCCTCCATGACACAGGTGGCCGTGAGGAGCATGACCTGAAAGATATTCATAGTGACAGTCATCACTTGCCGCCTACGATGCCTCATCCAGCTGCAGCTTTATTGGATCACGCTTTCTTGCAGCAGGCTTTGGAGAATCGTGGTGGTGGGGATATTGCTGGACGTGAGGCTCTTCATGCTATGGCCTTGGCGGCAGCTGCTCATGCCGCCGCCAACAGTATGTCTACGAGCCCAGGACCAAATGACAATGCTGTACGATCTCCTAGTCCcacaaattttgctttaaaatataacaatttgcGTAACGCCGAACAGGAACTAATGGAACGCCATGAAATGGAACGAGAGTTTATCGAAAGGGAGAGGGAGAGGGAAAGAGAGCGTGAGCGTGAGCGTGATTTGCTGCGGGAACGCGAAGAGGAAGATAATCATGTGGAAGATTTGTCGGTGACACGCAAAGACAAACCCCATTCCCCCTTAGTGGTGACAGAAAGACCCATTTCGCCCTATTCGCCTGAACCACCAGCTGTTgcagaaaatgaaaaatcagtTATAATGTCGACTAAACTACCCTCAAATCCCAGTGATGACACTTTCCCCAATGAAACTTTCGCGAAACGTGAGTTGGTGATTGATGATGTCAGAGCTGACTGA
- Protein Sequence
- MGGPPVSAPSNGPPEGQTYCLRWNNHKSNLVEILDSLIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFNKLSEEHAERSASNPYASTTAPSNPYSSVTTSTSPPSNLPNHKSSCSKDSDSYHNSSSQVISTSTNISPTAAPSSSSSPPYANFKSPYSSLYNKSPVPHVQPSSQTQAPANQQPPNNLTPTSEHSPQWSMSPSAAAAAMLSSVYESAADMNPLKRKKLSSMSSMLMSRDTPILRNVLAQANPADSSQQLPLMLPNSAANIKMEKSSNAEKNLSGHNNNHSFNGSDYGDKKYPDGLHSPFTDRSFEDDNFEQQKGGMLASSFSSTPNQKPEWKRYKQYTRSDIMSAIQCVREGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTLKRSPSSVESPAAFPYAHGYGQATSSSAVLHDTGGREEHDLKDIHSDSHHLPPTMPHPAAALLDHAFLQQALENRGGGDIAGREALHAMALAAAAHAAANSMSTSPGPNDNAVRSPSPTNFALKYNNLRNAEQELMERHEMEREFIERERERERERERERDLLREREEEDNHVEDLSVTRKDKPHSPLVVTERPISPYSPEPPAVAENEKSVIMSTKLPSNPSDDTFPNETFAKRELVIDDVRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00258994;
- 90% Identity
- iTF_01376732;
- 80% Identity
- iTF_01376732;