Sbel006782.1
Basic Information
- Insect
- Sturmia bella
- Gene Symbol
- bab2
- Assembly
- GCA_963662145.1
- Location
- OY759169.1:22468674-22470521[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.4e-08 5.8e-05 23.1 0.0 5 41 392 428 390 431 0.88 2 4 3.2e-14 5.5e-11 42.4 0.0 5 44 446 485 443 486 0.93 3 4 0.017 29 4.9 0.0 27 37 515 525 511 531 0.89 4 4 4.3e-15 7.3e-12 45.2 0.0 4 41 554 591 554 593 0.92
Sequence Information
- Coding Sequence
- ATGAATCACTTACGGTGGATGGGGCATTCGGCCACAATATTAGATATACACAAAAATCTACGAGCAGATTTGAAGAGCTGTGAAGTAACGTTAGTGGCCAAGGGACATAGTGTTAAAGCCCACCGTTTTGTATTATCTTCCTGCAGTGACTTGTTACGTTGTCTTTTAACAGATGTTCCTATTGGTCAGGAATGTTGTCTTATGGTTCCAGATATTAAGGGCCACTTATTGGACAGTGTTTTAGCCTTTATATATCTGGGAGAGTGTTCGCTGTCCTCTACAAATTTATCCGAATTTTTGGAAGCCATTAATGTTTTAGGCATTAAAAGTGCTATTAGTTTTGAGTGTAATACAAATGCTCTACAGGCAGCCCAAAATAGCACCATCACTTTAGATAGCGACACAACCATGGTACCAGTAAGTGAAGCAGCTTTATCTGACGCGCAGGTAGCAGTAGCAAATTCGGGAGAAGCGTTGCAACAGGAAGAAATAATTGAATCGCAAAATGTAATTCATAACGATGCTCATAGTGCAGACACAAATAGCGCCAATAATCCGAGTGCAAATAGAGAACTTGACTTTTTAGATGTATATCATGAGCCTCAACATAAAATAACGTATTCAATAGAACATGTTCCAGGCTCTACGACTggcaatgaatttattttaactgaAAACTCTGGCACTTTTACACTAACACATAGTGGTAAATTGGAACCAACAACATCTCCGGCGGAATCATCCAACATGGAAGTTACTGAAGATGACGGCTGTGATTCACATATAATCGAAGAGTACAGTAGTAGTGATGAACCTCTAATTCATATCGGTGAATCTGGCCAAGAACAACAAACTGTTACGGTAACACAAGCAATGgcacagcagcaacagcatacGACACCACTAGTCTCTGGTGCGCCGACCACCACCTCTATTATACAAGTCAAACCTAAAATTAAAACCATCAAACTAAAACATCTGCAGGGAGCTCAAAGAATAATCACTAAAATGGAACAGCTTTCCGATGATACTGGCAGCGACGACCCCATCTCGGTGCTACAGACATCAAATGAAAGTTTTACCTTGCTAAAAGATGCCTCCATAATATCCACCAGCAACACTAGTCATGACGAGTCGACAGATTTTTCTATGAATAACACAACTGCACCAGCGATTGAATTGGCATATCAAGCAATGATCAATGAAAGCATGTCATTACCAAAGGCCGCCGATAAATTCAATGTCTCGAAAGCTGAGCTTTGGCGCCGGGTGCGTAGTGGCGGAATGGAACAAGTcaacaaatcagttaaaactgATTCTGACAAAGTTGATGTTATAGAGCTTGCTAGTAAAGCTGTAATCAATGAGGGCTTGTCATTACAAAAGGCCGCTATTCGTTATGACATTTCTAAAACCGTCCTTTGGCGCAGAGTTCGGAAGCACCCGCAATATATGAAGACGGCACGAGAAAACCCGATTATAACTAAAGCATATGAGCGTTTAAAGTCCGGCGAATCACTTAAAAGCATTTCTCAAGACTTAGACATACCGATGTCAACACTGCACCGTCATAAAGTGCGTCTATCACAAAGTGGCCAGTTGCCTGACTTTGTTACATGCAAAAAACGTGATAATATGTCTAAAGATGATCTTAAACTAAAACTTTCCAAAGCAGTACATGCATGCGTGCACGAAGGCATGTCCCAAAATCATGCTGCTAATATAttccaaatttcaaaaagtacatTGTGGCGACACCTGCAAAAACGTGTGGCTGAAGCCGAGGCAGCCGAGTCCGAATCTATTGGCGACGAAGACGAAATTAAGCAAGAAGTTATTCTTTCATAG
- Protein Sequence
- MNHLRWMGHSATILDIHKNLRADLKSCEVTLVAKGHSVKAHRFVLSSCSDLLRCLLTDVPIGQECCLMVPDIKGHLLDSVLAFIYLGECSLSSTNLSEFLEAINVLGIKSAISFECNTNALQAAQNSTITLDSDTTMVPVSEAALSDAQVAVANSGEALQQEEIIESQNVIHNDAHSADTNSANNPSANRELDFLDVYHEPQHKITYSIEHVPGSTTGNEFILTENSGTFTLTHSGKLEPTTSPAESSNMEVTEDDGCDSHIIEEYSSSDEPLIHIGESGQEQQTVTVTQAMAQQQQHTTPLVSGAPTTTSIIQVKPKIKTIKLKHLQGAQRIITKMEQLSDDTGSDDPISVLQTSNESFTLLKDASIISTSNTSHDESTDFSMNNTTAPAIELAYQAMINESMSLPKAADKFNVSKAELWRRVRSGGMEQVNKSVKTDSDKVDVIELASKAVINEGLSLQKAAIRYDISKTVLWRRVRKHPQYMKTARENPIITKAYERLKSGESLKSISQDLDIPMSTLHRHKVRLSQSGQLPDFVTCKKRDNMSKDDLKLKLSKAVHACVHEGMSQNHAANIFQISKSTLWRHLQKRVAEAEAAESESIGDEDEIKQEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00199788;
- 90% Identity
- iTF_01376760;
- 80% Identity
- iTF_01376760;