Ssin019785.1
Basic Information
- Insect
- Stratiomys singularior
- Gene Symbol
- pnr
- Assembly
- GCA_954870665.1
- Location
- OX940878.1:170012331-170015184[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-18 2.3e-14 53.9 3.2 1 34 115 147 115 149 0.97 2 2 5e-19 3.4e-15 56.5 6.2 1 35 169 202 169 203 0.98
Sequence Information
- Coding Sequence
- ATGTTCCATTCTAGTGCTGGTTATGCAGACTTAGCGGGAGGAGCGAGTAATGCTGTATCGTATCATCAACAGAGTGCAGCTGCCGCTGCGGGAGCTCCTGTATATGTCCCGTCAAATCGTGCTCTAACGCATACTCAGTACGGGCATACAGGAGCGTTTGCTACGGCGGCAGGTCAAACTGCGTGGACAACTGATAGTTTTGGTGCCGCACATTCCCAGTTGCCTGCACAATTCTATGCTCAGTCGATGATGAGTTCATGGCGAACATATGACCCAACTACATTCCAAAGGACATCTCCGTATGATGGCGCTGTCGAATTTCAATTTGGTGAAGGTCGAGAGTGTGTTAACTGCGGAGCTATCAGCACGCCTTTGTGGCGGCGAGACGGTACTGGTCATTACTTATGCAACGCCTGTGGACTATATCACAAAATGAATGGAATGAATAGACCTCTGATAAAACCCAGTAAACGATTGacGGCAACCCGGAGACTTGGATTATGCTGCACGAACTGCGGTACGAGAACGACAACATTATGGCGCCGAAATAATGAAGGCGAGCCAGTATGTAATGCATGTGGCTTATATTTCAAACTTCATGGTGTGAATAGGCCACTTGCTATGCGTAAAGATGGTATTCAAACCCGGAAACGAAAACCGAAAAAGACCGGGAACGAGTCCTCGTCGGGCAAGGATAAAGATATAGAAGATATAAAGCCCACCATGAATTCGGCGTCTAACAGTAACAATCATCAAATCGAACGAAGCTTAAGCACGAGTAAATTATCATCGAACAGTCCTAAACACGCGCCACTACATCATCAGTTACATTCACCGTCCACAACAATGTCCCAATCGCGGGCCCAGACCACAACATCTACTATTTCATCCTACTCACCGAACATACAGTCAGCCCATACATCGTCAGCTATGAGCAGCGCTTCGGCAGCAAATTTGCACAGCAGTTTAGCTCTCAACTCTTCTTCAGCAGTATCGAAGTACGAGCACCTTTTGCATGCTGGTGCTGTCTCCGCTGTTTCGAACCTTTCGCTCGCAAATAACGTATCTGGAGTTTCAAACTCTAGCAGCAACTATCATCCGGCCCATAATTTAGCCCAACATTCCTATGGCGGGGTGAAAGCCGAATCAAATACATCTTCGTATGAATATATGAATAATTGCTACTTTGGGGGCACGTTTGGCGCTTTAACTTCGGCCAGTAGTGGGGTGCATAGCACACCGGAACTTGCCGGGTATCACCATCAGCACAACGTTATTCAAGCAGCTAAACTCATGGCGTCATCCTAG
- Protein Sequence
- MFHSSAGYADLAGGASNAVSYHQQSAAAAAGAPVYVPSNRALTHTQYGHTGAFATAAGQTAWTTDSFGAAHSQLPAQFYAQSMMSSWRTYDPTTFQRTSPYDGAVEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTGNESSSGKDKDIEDIKPTMNSASNSNNHQIERSLSTSKLSSNSPKHAPLHHQLHSPSTTMSQSRAQTTTSTISSYSPNIQSAHTSSAMSSASAANLHSSLALNSSSAVSKYEHLLHAGAVSAVSNLSLANNVSGVSNSSSNYHPAHNLAQHSYGGVKAESNTSSYEYMNNCYFGGTFGALTSASSGVHSTPELAGYHHQHNVIQAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01089669;
- 90% Identity
- -
- 80% Identity
- -