Basic Information

Insect: Stratiomys singularior
Gene Symbol: -
Assembly: GCA_954870665.1
Location: OX940878.1:159122621-159149489[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0032 0.53 12.0 0.1 3 23 801 822 799 822 0.96

2 15 4.7 7.8e+02 2.0 3.4 3 23 829 850 828 850 0.95

3 15 1.3e-05 0.0022 19.5 1.6 1 23 1098 1120 1098 1120 0.99

4 15 0.00038 0.063 14.9 0.9 1 23 1126 1149 1126 1149 0.96

5 15 8.1e-06 0.0013 20.2 1.2 1 23 1154 1176 1154 1176 0.99

6 15 0.0025 0.42 12.3 6.9 1 23 1182 1204 1182 1204 0.99

7 15 1.1e-07 1.9e-05 26.0 1.4 1 23 1210 1232 1210 1232 0.96

8 15 1.1e-05 0.0018 19.7 0.4 1 23 1238 1260 1238 1260 0.99

9 15 1e-07 1.7e-05 26.2 0.4 1 23 1266 1288 1266 1288 0.99

10 15 0.0014 0.23 13.1 6.3 1 23 1294 1317 1294 1317 0.97

11 15 0.0008 0.13 13.9 2.1 1 21 1363 1383 1363 1385 0.95

12 15 1.7e-05 0.0028 19.2 1.3 1 23 1391 1414 1391 1414 0.93

13 15 3.7e-05 0.0061 18.1 0.6 1 23 1420 1442 1420 1442 0.95

14 15 0.00017 0.028 16.0 5.9 1 23 1448 1470 1448 1470 0.98

15 15 0.93 1.5e+02 4.2 0.0 1 16 1476 1491 1476 1493 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0032	0.53	12.0	0.1	3	23	801	822	799	822	0.96
2	15	4.7	7.8e+02	2.0	3.4	3	23	829	850	828	850	0.95
3	15	1.3e-05	0.0022	19.5	1.6	1	23	1098	1120	1098	1120	0.99
4	15	0.00038	0.063	14.9	0.9	1	23	1126	1149	1126	1149	0.96
5	15	8.1e-06	0.0013	20.2	1.2	1	23	1154	1176	1154	1176	0.99
6	15	0.0025	0.42	12.3	6.9	1	23	1182	1204	1182	1204	0.99
7	15	1.1e-07	1.9e-05	26.0	1.4	1	23	1210	1232	1210	1232	0.96
8	15	1.1e-05	0.0018	19.7	0.4	1	23	1238	1260	1238	1260	0.99
9	15	1e-07	1.7e-05	26.2	0.4	1	23	1266	1288	1266	1288	0.99
10	15	0.0014	0.23	13.1	6.3	1	23	1294	1317	1294	1317	0.97
11	15	0.0008	0.13	13.9	2.1	1	21	1363	1383	1363	1385	0.95
12	15	1.7e-05	0.0028	19.2	1.3	1	23	1391	1414	1391	1414	0.93
13	15	3.7e-05	0.0061	18.1	0.6	1	23	1420	1442	1420	1442	0.95
14	15	0.00017	0.028	16.0	5.9	1	23	1448	1470	1448	1470	0.98
15	15	0.93	1.5e+02	4.2	0.0	1	16	1476	1491	1476	1493	0.87

Sequence Information

Coding Sequence: ATGCCAATCTGTTTGATTCCATCTTGTCCTTCAAATAATCAAGATTCAGGGGTTGTGAGAGTATTTACTGTTCCAGATAATCCGAAACGCATTGCGATCTGGTCTGATATATTGTCCAAAGAGAATATAAAACTTGTCAAAGGCTCGCGAATTTGTTATAGACATTTCGATGAAGCTTATATAGTAAAGGGCGGTTGCTTTATAGGGCAAGATGGCATTGAACGGGAATATAAAAATACGAACTGGAGACTAACAGAAGATGCAATTCCATCATCAGAACTtattgaaaatccaaataaagaGAAAATGGCTATACCTCGATTACctgaaaaaatatttcaagtggATAAAACTTGTCGAACATGTTCAATAGAAATTGACGACGAAAAGGACTCCACGCCTCTCTTTCATGGCTCATTGTCTCTACAAAAATTCAGACCAGATATATTCAAGGAGCTGGAAGACTTCGATTTGAATATTGATGATGATCTTACCGATACGGAACAAAATGCCACGGATGAAGACGCCAactcagaaaaatggacgtgtgAATACTATATTGGCGCTGATAGAAATCCAACCCCAACAAAGCACAACACATTGAAGAGAAAGtttaaGCCAAACGATGGTCTCCCGCAAAAAATATGCTTCACCTGTCTGAAAACATTTGCTGTGATAAGCGAGTTTAGAAAACGTTGTGAAGATGTACAGAAAATTTTAGCCTTCTACCATATATCACTAAATACTAagaacttttatgaagaaactaCAATTAATAATATACTCGGTAGCAATATTAAAGAAAGATTGATGAACAATAATGAAGAAGAAGCTGATAGTCCAACTAATGTCTTAAGTCAGGAAATTAAAAGGGAAATATCGGATGAAGAACCCGAAATGAAATTTAGTGAATCGTTCGCCACGAACCTTACTAATGATCCAGAGGTGAGCAGAAggccaaaaagaaaaacagctcTGGCATgcttaatgaaatttaaaaatgatgatttcgaatcaaatgaaaatgatttcgaatcAAATGTTAGTTTCGCTGACGATGGTGTTGAAGAATATACGCCTGACGTTGAAGATGATTGCAGTGATGTGCTGGAAGAGCATGACTTAAATTTAAACGAATATGAAGTGAAACATAACATTAACGGTATCGATTTTGCAAATGAGTACGATCTGATAGAGGaagatttaaaaatagaaacagAAAGTATTGATATATACTCGATAGATGAGCATTTAAAAGAAGATGCGAATAGCCAGGAAGATAATGATTCCATAGTTTTATCTAGTGACGAGGATATAGATGATTTGGAATTAAGCGATGCAAATTGGCAATgtgaattttccattgattcgAGAGATACAGTTGATCGCATCGATAATGAAACCatagaaaaatcaaatgatggaaaaaatgtagatagaaaaaatggagagaagGTTAAGCCAAAAGACGGACTCccgcaaaaaatatgttttagctGTCTGAAAACCCTCGCTGTGATTAGCGAATTTCGGAAACGATGTGAAGATGTACAGAAAATTCTAGCATTCTATCATATATCACTTACCTCGACAAACATccaaaatgaaaccaaaatcCAAAATGCGCCTGGTAGCAAAAGTGAACAAATATCGATAGATATCAGTGAGGAACAAATCGCTAGTCCCGCCAATCTGACGATTCCAGATGTTAAAAGTGAACCCTCGGATGAAGATTCCGAAATGCAACCTAATGAAACCCTCGCCGTGCACGTTTCCAACGGTAGAGAGGTTATAAGAAGGCCAAAACGAAAGACGGCTCTGGCATgcttaatgaaatttaaaaacgatGATTTTGAATCGAATATTAGTTTTGCTGAAGATGCTGGTGACGACTATACGCCTGACGTTGAAAATGATGGCAGCGATGAATTCGACATGCAAGTCTcgaattcgaaagaaaatgaagtgaaaCATAAAGTTAATGGCatcgattttgaaaatgaatacgTGCTAATTGAGGACGATTTACAATTAGAAACTGAAAATGGTGATATATACTTGTTAAATGAAGCTTTAAATGAAGATGAAAATAGTTTGGACGAATAtgattccataaatttttctacCGACGAAGATATGGACGATTTAGATCTAAGCATGGAGTATTACCTTAATTCTAGAGACACTATTGATCCAGGGGAGAATCAGACTATAGAAATAATAAATCAGAATGACAAAAATTTCGTAGAGGAGAAAAATGCCGAAGTAGAGGATAAAATGACGAAACGAAAAAGTATCAACATTCCACAGAAAGACAAAGAACGTTGTCCGTTTTGTCATAAATTATTCGGATCGATTACGTTGCACAAATTGAATTGTCGGTTGCGGAAAGGTCTCGCATGTAAATATTGTTATACATCATTGGAAACGGCTGAGGAATTGAAACAACATATTGAGACAATGCACCCAGAGGGTCTACCAGCTTGTCATATATGTTTTTCGACATTCGAAAGTGTGCATAAGCGTAGAGAACACATACGAGAGCAGCACACGGAGATTAGATTCAATATGAATGCCACTTTTAAACATTGCCTTGATAATACGTGTCGTACCTGCCTTGCTGTGAACCCTAAACCAGACGAGCTATTATCTTTATTCGAAACAGATATATTGGAGGAGATTAAATCTTTTCACCTAAGGatattgaaagatgATGGATTTCCGCAACTAATCTGTTTGAAATGCTATGATGCATTTGTTTCTGTGAGCGAGTTCAGAAGGCAGTgtattgaaaaccaaaaacggTTAGCTGATATTTTTGTTGCTAGCATAGATGATAACACACCGCCAAGTACGGATGAACTTATCTCTTTTGAAATCCTTATAATGAATACGGAAGATGAGGTatctgaagaagaaaaagaaatatcgACCAAAACTTTATTAAATGATACAGTGAATTGTAACGATGAGTATAAAATGAATAACTTGTGTACTTATGAAGATaatgcttcaaaaaatgaaattatgctGATATGTAATAAAGCAAAAGAGACAAGCGGGTTCACATTTGTATACTGTACGAATAATGATATTGTTCTACCATTTAAGCGGAGTCTTGTTATAGACACCATACTGGATAAGGGATGCAAGGCAACAACTTCATTGAGACCAACAGCAGCAAGAATTCCTTTATCGGATGATTCCATAAATCATCGGAATGATATAACGCTTGAAGATCTCGAAGGTGTAGTAAATTGTAATCTCACTAGTTCGGAATCATGTCAGCTCTACACATGCCAAGTGTGCAAACGGAAGTTCAGTAGCGCATCAAACCGCAATGCTCACCTCAATACACACAACCATACACAGAGTTTTGATTGTGATTTATGTGGACAGAAATTCAAAAGTAAAGTATATGTAGCCAAACATAAGCGTTCAATACACGCAATTGGTGAGTATGAATGCCCGATCTGCAATCTAACATTTCGGAACCCCAAACGGTATAATTATCACATGCGATCACACAGTcctattaaaaaatataaatgttcgTTCTGTGAACGATCTTTTATGCAACAACATCATATGTTGAATCATGAACGGACGCACACTGGACTAAAACCATACTTGTGCAATGTATGTGGTAAAAGTTTTAGACAGGAGTCGAATCtgaaaaagcatttgaaacTTCATACTGGGGAACGACCATATACGtgtgaaatttgtgaaaaaaACTTTGTTCAACGTGGAGCTTACGTGATGCACATGAGACGCCACGACAATATACGACCTTACCAGTGTGAAATTTGTGgcaaaaattttacacaaatgTCATCGCTTACAATTCATTTACGTATTCATACTGGAGATCGACCCTTCAAATGCGATTTGTGTCCTAAAACGTTCGCGCAAACTCATCAGCTGAAGTATCACAAGCATACAACACACCCTTATTGCCGATCTGATTCCTCTGAAAAAGGTTTGCAATCGAAACAATCGTCATCAGCTCATTTACAAGAGCAAGAAGATATGACTGAAAATTCGTCGTCGCCCAAAAAAGCTAACTATGTGAATTACTATCCGTATTCATGTCCCGTTTGTTCGAGAGGATTCAAGCTCCCATCTTCGTTAAAATCTCATTTGAAATGCCACTCCGAAGAAAGGAAGCACGCTTGTAAAGAGTGTGGCAATACATTTAAACGAGCCGAACACTTACGCGTACACATAAATGGTgtgcatttgaaaaagaaacctTACCTTTGCAATTATTGTGGGAAGGCATTTTCACAGTCCGGCGACCGAAATATTCACTTAAAACAACATACagTTGATAAGCCGCATAAGTGCAAATATTGTCATAAAGGTTTCAGGCTGCAAAAATCTTTACGAGCTCATGAACGTATTCACACTGGTGAGAAACCATATGTATGTGAGATATGCAAGATGGGTTTCATATCATACAATGCATTGGCAAGTTAG
Protein Sequence: MPICLIPSCPSNNQDSGVVRVFTVPDNPKRIAIWSDILSKENIKLVKGSRICYRHFDEAYIVKGGCFIGQDGIEREYKNTNWRLTEDAIPSSELIENPNKEKMAIPRLPEKIFQVDKTCRTCSIEIDDEKDSTPLFHGSLSLQKFRPDIFKELEDFDLNIDDDLTDTEQNATDEDANSEKWTCEYYIGADRNPTPTKHNTLKRKFKPNDGLPQKICFTCLKTFAVISEFRKRCEDVQKILAFYHISLNTKNFYEETTINNILGSNIKERLMNNNEEEADSPTNVLSQEIKREISDEEPEMKFSESFATNLTNDPEVSRRPKRKTALACLMKFKNDDFESNENDFESNVSFADDGVEEYTPDVEDDCSDVLEEHDLNLNEYEVKHNINGIDFANEYDLIEEDLKIETESIDIYSIDEHLKEDANSQEDNDSIVLSSDEDIDDLELSDANWQCEFSIDSRDTVDRIDNETIEKSNDGKNVDRKNGEKVKPKDGLPQKICFSCLKTLAVISEFRKRCEDVQKILAFYHISLTSTNIQNETKIQNAPGSKSEQISIDISEEQIASPANLTIPDVKSEPSDEDSEMQPNETLAVHVSNGREVIRRPKRKTALACLMKFKNDDFESNISFAEDAGDDYTPDVENDGSDEFDMQVSNSKENEVKHKVNGIDFENEYVLIEDDLQLETENGDIYLLNEALNEDENSLDEYDSINFSTDEDMDDLDLSMEYYLNSRDTIDPGENQTIEIINQNDKNFVEEKNAEVEDKMTKRKSINIPQKDKERCPFCHKLFGSITLHKLNCRLRKGLACKYCYTSLETAEELKQHIETMHPEGLPACHICFSTFESVHKRREHIREQHTEIRFNMNATFKHCLDNTCRTCLAVNPKPDELLSLFETDILEEIKSFHLRILKDDGFPQLICLKCYDAFVSVSEFRRQCIENQKRLADIFVASIDDNTPPSTDELISFEILIMNTEDEVSEEEKEISTKTLLNDTVNCNDEYKMNNLCTYEDNASKNEIMLICNKAKETSGFTFVYCTNNDIVLPFKRSLVIDTILDKGCKATTSLRPTAARIPLSDDSINHRNDITLEDLEGVVNCNLTSSESCQLYTCQVCKRKFSSASNRNAHLNTHNHTQSFDCDLCGQKFKSKVYVAKHKRSIHAIGEYECPICNLTFRNPKRYNYHMRSHSPIKKYKCSFCERSFMQQHHMLNHERTHTGLKPYLCNVCGKSFRQESNLKKHLKLHTGERPYTCEICEKNFVQRGAYVMHMRRHDNIRPYQCEICGKNFTQMSSLTIHLRIHTGDRPFKCDLCPKTFAQTHQLKYHKHTTHPYCRSDSSEKGLQSKQSSSAHLQEQEDMTENSSSPKKANYVNYYPYSCPVCSRGFKLPSSLKSHLKCHSEERKHACKECGNTFKRAEHLRVHINGVHLKKKPYLCNYCGKAFSQSGDRNIHLKQHTVDKPHKCKYCHKGFRLQKSLRAHERIHTGEKPYVCEICKMGFISYNALAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -