Basic Information

Insect: Stratiomys singularior
Gene Symbol: -
Assembly: GCA_954870665.1
Location: OX940878.1:64578665-64597902[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.2e-08 6.5e-06 26.9 0.0 2 39 28 64 27 68 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.2e-08	6.5e-06	26.9	0.0	2	39	28	64	27	68	0.94

Sequence Information

Coding Sequence: ATGCGCCTGCGCAGTTGTCGCTGTGACTTCGTGGCGCTCATGCCTCGTAGTAAGGATGGAAAAACGCGACGTAAGCTGTGTCCAGAGACATTGTCTGAGGCAGTTAAAGAGGCAAGAAATGGATGTTCTTTACGAAAAGttgcagaaaaatatgaaataccaAAATCTACGATATTTAAATACCTTCGCATGAATAAGGACAAGGATCTGGATCGTAACAGTGTAGATATTTTGAGAAATGACGTAAAGAAAGTATTCAATGAGGATGAAGAGAAACAGCTAgaagaatatttagaaaaagcaGCTTACCTACATATGGGATTAAATGTTAAGCAAGTCAGAGAACTGGCATACCAGTTTGCGGTGatgaagcaaaaacaaaatatcccaAATAGCTGGCACCAACACAAAATGGCTGGCATAGGCTGGCTAAGATACTATCGTCAACGTCATTCACATTTGTCTCTACGGAAGCTTGAAGCAACCAGTTTGGCGCGAGCAAGTAGTTTTAACAGACCTAATGTTTCTAAGTTCTTTGACAACCtccaaaaagtaattgaaaaacacCAATTTACCCCCGAAAACATATATAATCTGGATGAGACTGGGATATCCACAGTTCATAATCCGAGGAAAGTGCTGgctccaaagaaaataaaacagctAGGTAAATTAACATCAGGAGAAAGAGGAGTAAATAACACCATGATTGCCTGTATAAATGCTGTTGGAAATTCAGTTCCCcctttgataatatttcctaGAGTTTTCTTTAAAGACAATATGTTAAAAGGTGCTCCTCCAGGTACGATTGGTGCAGCTAACCAATCCGGATGGTCAACTGAATTGATCTTCAGGAAATATCTGGATCATTTCATAAAGTTTGCAAAACCTACGAAAGAATGTCCGGTCCTCTTGTTAATGGACAACCATGAAACACATATCTCAATTGATATCATTGAAAAAGCCGTCGATAATGGTATAGTTCTGCTCACGTTGCCTCCACACACATCAGATAATTTACAACCTTTAGATCGTTGCGTTTTTGGACCATTTAAGGCGCAATACAACAAAGCAGCCGATAAATGGATGCTAAATAACCCTGGAAAACCTATCACAATTTACGACATTTCAGAAATTGTCGGTGATGCATATCCTCTTGCTTTCAcacccaaaaatattattaaaagtttCGAAGTAACAGGCATTTGCCCATTTAATAGAGATATATTCAGTGAAGAAGATTTTTTATGCTCATTTGTTACTGATCGACCCGAGCCATTGACCACAGTTTCAGATAATTGTACTCAAAGTCAATCTCTCACGGAAGGGTCGAAAATCATCTTCAACTGCAATCATGATGAAAATCTTAATGTCTACTCGGAGATACAACAACCCAATGATAGTGTAGAAGAGGTAATGCATATTGCTGGACCATCTGAAATTCGGCATACAAATCAGGATACAGAAACTCAGTCTACTGCTGTTTGTCAGTTCTCTCTGGATGAGACTCGTGAAGATATGGAAAATGCACCAATCACTCCGAAAAAAGAGCTTCACAAAATAACGCCGGAATCTGTATGCCCatCTGGCAAGTTTGGATGTCGTAAGATCATTGTCTTGTCACATAAACAGTTGTCGGTCACTTCCAGTTTCCATGAAGCCGCGATTATTGCTAGTGCTATTGATTGTTTGTGCTCGAAAATGCCTCCCAAACGACCCCCagcttacaaaaaaaatcttacaagtGAAGACTTGCGACGATTATCGGAAGAAAGTGACTTCGAATTTAGTGGTAACGAATCGGATTCTAACGAAAATAAACGTGGTGTGCAAATCGTGCTAGACTCGGATGATTCTGGGGAAGATGACCAAGAGCCAAGTATTTTCGGTGATGATGACTTTTATCATCCTGACTTTGATGCTAGTGAGGTTTCTGATGCAGATAGTTCAACCGACGCTACCTTTGGAGAGTGCGGCAGAAACTCGCCTATTGATGAGCCGATAGATGTGATTCCAGATCTTTCTCAACCAGGACCAACTGGTTTGCAGCGAACTACATCCCGAAAATGGACTACAAGAGAGGTCATGGAACTTACCCCACAAGCAattgatgaaatcgataaaaaaaatggatggGATCAGGGACCCTTGTCACGTCAATTTTATGAGGGAGGTCCATCTATGCATATCCATGGTGATCAATCTATTGCATccatttatcggcaaatattgaGTGATGAAATTTCGGATCTAATGGTCACTCATACGAATTTGTATGCATCCCATACAAAACGTAAACCAAACATGCCAACCTATAGCCGAATGAATCGGTGGGCAGATGTTACGcgaaaggaaattcaaaaatttattgcctTGTACATGCTGATGGGCATTGTAAAATTTCCCACTTTGGAATCGCATTGGAAACTGGATGAAATATATTACCATCCAATGTTCCATAATGTGAATATGTCAAACAAAGTTAAAAGGGGTCCAATAGATAAGTTAAACGAACAACAAAGTAAGCAACTTCTAAATAACATCAAGCAAAAACAATCTACAGGAACAATAGCTGAGATAGAACAGAATTTGACTGAAGAACGACAACAAGACTTCACCTACGAGGAACAACAGGACGTTATGGACAGACATAAAAAACGAACAGCACCAGGACCGGACCTAATTGACTACGACATAATCAAAACCCTCCTACTGACTAACAAAGAGACCACACTCAAGGCAATAAACAACGCAATAAATACTTGTGAGATTCCGGACAAGCTAAGAACAATCAGGATAGCCCCAATTCTTAAGCCACACAAAGATCTGCAAGACATCACAAGCTACAGACCCATCTCACTAATAAGCGTTCTGGCAAAAGTTGCTAATAGtctgatcaaaaataaaattgtaaaacagATTGAAGAAAAAAGCTTGCTATCAGGAAACTGTTTTGCGTACAGACGAAACAAGTCAACAATCACATGTCTTAATAAGCTGAAGCTaaatataacaaacaacaatggGAAATCCATCAAAGTAGCGGCAATATTAGATCTTGCGAAAGCCTATGAAGGAGTTGATTTAGAAACACTAAAGGATATTTTAATCGAACCACATTTTCCACACCAGATTCCAAAAAATAGACGTCGGCAGGAAATATGGAGCAGCGTCATGAGAAGAAACACGGGAATTACAGCCAATCCGCATAGCGATCGGATATGCGAACGTCATTTTAGAGCGGAGGATATTGATTGGTCGGGAACAAGACCAAAATTATCTCCAAACGCGGTTCCAGTTATTGAAAAGAGGATTTCTACGCACCCAGATGCAGTGCTTCCTGCTGAAATGAAAAGGCGGAGCTATTTGAGTCAAAGGAACCGAGATAGCCTTATGCAGGATCTACATGGGTTATCTCAAAAGAATAATTcggcacaaaaattttatagtgAAGTTATCGATCTTGTGTCCAGCCTGAACAACCATACGAATTTACACGAAAAAGATGAAAGTATTAATGAAGCCATGAAGACTCTCCATACAAGATTGGGGTTGAAGGTGTTTTTATCGGATTTAAGAGAACCTTTAGGCGGCATAATCCGAGCGATGAGGCATCAAAATTTGTCACAAGCATTTTCATACTGTATGGATGAACAAAATATTGCATACAATAGGTTACGTAATCAGAAACccacaaatttttctttcccATTGGGAAATGCAGACGGAAATTCTGATCCCTCAAAACAGTTTAACCGTTCTCCTGTTCAAAATCAACATTCGAAATATCCTGGACAGCTTAATGGACCTGGACCTTAA
Protein Sequence: MRLRSCRCDFVALMPRSKDGKTRRKLCPETLSEAVKEARNGCSLRKVAEKYEIPKSTIFKYLRMNKDKDLDRNSVDILRNDVKKVFNEDEEKQLEEYLEKAAYLHMGLNVKQVRELAYQFAVMKQKQNIPNSWHQHKMAGIGWLRYYRQRHSHLSLRKLEATSLARASSFNRPNVSKFFDNLQKVIEKHQFTPENIYNLDETGISTVHNPRKVLAPKKIKQLGKLTSGERGVNNTMIACINAVGNSVPPLIIFPRVFFKDNMLKGAPPGTIGAANQSGWSTELIFRKYLDHFIKFAKPTKECPVLLLMDNHETHISIDIIEKAVDNGIVLLTLPPHTSDNLQPLDRCVFGPFKAQYNKAADKWMLNNPGKPITIYDISEIVGDAYPLAFTPKNIIKSFEVTGICPFNRDIFSEEDFLCSFVTDRPEPLTTVSDNCTQSQSLTEGSKIIFNCNHDENLNVYSEIQQPNDSVEEVMHIAGPSEIRHTNQDTETQSTAVCQFSLDETREDMENAPITPKKELHKITPESVCPSGKFGCRKIIVLSHKQLSVTSSFHEAAIIASAIDCLCSKMPPKRPPAYKKNLTSEDLRRLSEESDFEFSGNESDSNENKRGVQIVLDSDDSGEDDQEPSIFGDDDFYHPDFDASEVSDADSSTDATFGECGRNSPIDEPIDVIPDLSQPGPTGLQRTTSRKWTTREVMELTPQAIDEIDKKNGWDQGPLSRQFYEGGPSMHIHGDQSIASIYRQILSDEISDLMVTHTNLYASHTKRKPNMPTYSRMNRWADVTRKEIQKFIALYMLMGIVKFPTLESHWKLDEIYYHPMFHNVNMSNKVKRGPIDKLNEQQSKQLLNNIKQKQSTGTIAEIEQNLTEERQQDFTYEEQQDVMDRHKKRTAPGPDLIDYDIIKTLLLTNKETTLKAINNAINTCEIPDKLRTIRIAPILKPHKDLQDITSYRPISLISVLAKVANSLIKNKIVKQIEEKSLLSGNCFAYRRNKSTITCLNKLKLNITNNNGKSIKVAAILDLAKAYEGVDLETLKDILIEPHFPHQIPKNRRRQEIWSSVMRRNTGITANPHSDRICERHFRAEDIDWSGTRPKLSPNAVPVIEKRISTHPDAVLPAEMKRRSYLSQRNRDSLMQDLHGLSQKNNSAQKFYSEVIDLVSSLNNHTNLHEKDESINEAMKTLHTRLGLKVFLSDLREPLGGIIRAMRHQNLSQAFSYCMDEQNIAYNRLRNQKPTNFSFPLGNADGNSDPSKQFNRSPVQNQHSKYPGQLNGPGP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01375896;
90% Identity: iTF_01375896;
80% Identity: iTF_01375896;