Ssin033631.1
Basic Information
- Insect
- Stratiomys singularior
- Gene Symbol
- ARID5B
- Assembly
- GCA_954870665.1
- Location
- OX940881.1:28650169-28670299[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-14 4.1e-10 41.1 0.6 2 89 489 569 488 569 0.89
Sequence Information
- Coding Sequence
- ATGTACTCGTATAAAGTTTCTAATGAAATTCTCTCGTTTTACTTTCAGGTTGTTGGTGGACCGTGTGGTTTTCATGGCCCTTACACATTCTATAAAGGGTTAGAAATTGTGCCTCAAACGTTCAATGGAATTAATGGTACATATATGCGTAACCATAATTCCTTGAATGGATCAAACAATACACATTTATTCCCAAATAATGGCGGaagtaaaataacaaaacatttaaCAAGGAAATGTTCAAATGATAAAAGATCAGATGCTGCCTGTAATGATTCCAGTAATACAAGACTTAAGAAACCTTTAATATTAGCTTTGGGCGATTGCATACCCGTGCGACCCTGGTCCGATTCACCAATAGCCTGCCTGGCGGAAGTTCGAATGATATGGCGGGATCGGAACGAGCCTTCTTTGTTGACTGGCTTGAGATTGTATTTCTTGCCAGAAAACACACCCATGGGTCGGAATGGCCATGGCGAGGATGAAGTAGTTGCGATCTCGGATAAAGTTGTGATTCGTGCCGAAGATTTGCTGAATTGGATTGATGATCGGCTTCAATGGAATTGGGGGTTAGTGAGGGCACCTGCGTCATCGAAAGATTTGTCCGGAAGTTGTAGTAAAGCTCGCAACCATTTTGTGTCGGAGAAAAGTTCGAGTGATGTGATGGAAGATCCACTTGCCTGTCCCACAGTAACAACAAGCCTTTCGTTGCGGAATTCACAATTGGATTTTTCCGATGTGGAACGAGAGAAGCGATTAGATTCCAATACAACAACTCGTGTAGCAGTTCTTACTTATCCACGATACTGTCGATATCGTGCAACCCTTAAACGTCTTGAGAACGTGAATGACGAATGGTTCCGAAACTCGATAGTTGCCGCGTTATGTGGATTTTCATCAATATCGTCAGATATGCGTGTAATGTTTTGTCGCGATACATTCGATTATCCTGAACTGGAAACACATGAACTTTTATGCAATCACTTGGCACCCAAGCTGAAAGGAAGACCGCGTGGACGGAAAAAGAAATATCGATCGGAATCTCCATTTTCGGGTGGTAAAAGAAATGATTCAGGAAGTGAAACAAATGATTCAGATATATCGATATTTTCAGTTGGGAAGAATGTATCTATCAAAGTTGAACCTCGGCCACATTTACGATTTAATCACAGGCCAGCTCGAACGAAATCAAAGTCGGAGACAGAAGGAAAATCATTCAGGCCTTATGAAAGTCGCAGGGACACGGAGGATGAAGGCAAATCACACAAATCGGCAAGACTTCAGACCAAAACTGAACTGGCAGTTTACAATCGAAAGCCAagttcaatggaaaaaactGGCAAATTCTTAAAAGTGGCTTCAAGTACGTCAGTTACGAAGATAGCTAATCCAAAACCATCCACAACAGCGACAACAACAGTCAGAACTGCGTCTTCAACAACTTCTCCCACGACACCGTCCGAAGAGAAGTTCTTCTTGCGTAAACTTCATGAATTCCACGTTAAGCACGGAAATGTGATACCAAAGATGTTATGGATGAACTTGAAAAATGTGTATTTGTATGCAATATTTCGTCAGGTAAAAAAGTTAGGAGGCTACGATGCTGTCACCATCAAAAAGCAGTGGAAGACGTTGTTTGGCGAGAACAATGAACCACATTTGTCAATCACAAGACGCAAATATGAGAAGATTCTGTTGCCTCTGGAAAGATCAGAATTGGTTACTAAGAAGCAACCATCTACTACTGTTTCGGGGAAAGCAGAAAAGTCTGAAGCTAGGAAGGAAATGAAGGAAACAAAGGTTAACAAAGAGGAGCAAGTATTAAAGGATGAGGACGATAGTGTTGAACAACTGTCCTCGGACAGCGGAGACGCCCAATCTACATCATCATCGCCATCCTCACCACAGGTTCCTAGTATAAAATTCTCCATTAAAAAGGAGAAACGAAGCGACTCTGAATCTGAACTGAGCAAAGAAGAAATGActgcaattcaaaataaggtGAAAGCAAAGACAACAGGTCCTGGTGAAGGCCAGGAGGTTGACGTGAAACCCATTCTACCTCAATCAAGTGAACCCGTAACTCTAGGAACTTCAACTGGTGCGAACAAAAGCCCCGAAAGGAGTAGTAGTGTTCCAGTAGAGCAAATTACGACTCCAATCTCGGTGCCACTCACGGTAATCGTAGAATCTCCAGAAGGCAACCGTAAAAGATCGCCATCGGATGAAGATGTTAAACCTGTAATATCCACGATACCTGTAGAGGTGTCAACGGAAGCAACTTCAGAGGACGCAAAGGGTAGAAAGTCAACGTCATCgcagaaaatacaaattcaacaaCCCCATACAACAATTACCGTTCATCAAACTACTATTCACCCACAAACGCATTCCAAAAATTCTGCATCGAATCAAAttacaaatcaaattcaaatcacaaACCAAATTCAAATACAGCAGTTCACAGTGCAACCGACGCCAAGCGATTCGCCGAGTAGTGTTCCGAAGAGTTCGGAGATTAGATGTAACATAAAGCACGAGTTGGACGGAAGCCAAGAAGTGAAGATCGAGAACAGGGATCTGGGTGGTGACTCGAGTAATATGAAGGAGGAGAAAGTCAAAGCGAGCACTTCATCAACATCGTTGCGCACAACAGTTCGAGTGAAAAATGAGTTGAAACcgttcgagaaagaaaatatccCGTTCATAGCAGCTGGGACGACAATAACTCCAGTAATATCGCAGCCTCGCAAAACCACTGATGTTATCGACTTGGCGGATAGTGATGGAGAAAGTAGCAGCTCGTTCCCGTCAAAGAGAAAAACGAACTCCAGCCAAGAAAGTGCAGCGGTTCCACCAGTAAAAAAACGGAAGTTAGACATTCTTCGCGAAGGTGGCTTGGAAGTGACCGCAATCAGTAATACACATGGTGTAATTTCCACATCTCCCATTTTACCCGATATTTCGTTAAGAATTCCCTCCCATACATCAGTGCAACCTGTTGATGAAAAGTTCTCGTTGCCTGCTACAACCAGCTTAACTATTCCTAATCCAAATGGGGTGAGAAACAATTTGCCGAAGGTAGCGACACCGAGCATATTTTCGAAAACCagcaaaatatttggaaatccAAAAGATATTTTGCAGACAAGGACCCCTGCGCATGCTCCTACGGGAGTGGAGCAAATCTTAGATCTCACTGTGAAATCGCCTTTAAAATGTCCGTCATTGGAAATTCACCCCATACCAAGTGCACGACGCAATCGATCGCCGCCAGGTGCTGGGAGTGGCACTAGTTCAACGTCGACTGCTATTCCAATAAATCTTTCCCAGTCGTCTAAGTCAAAGTTAGCTGAGAATGGCTTGCAAATCACATTGGTGCCTCAATCTAATCAATTCCACGGAGGAGTGGTGCCGCCAAATCAACGTCTCGCCGCTCCGTTGACCCATACACAAAGTATCCATAATTCACAGAACCATAATATCAATAAACGAAAGCCAACAATCGATGTGATTCAAGTGCCCACACCTCGTACTCCGGTATATGGTAGAGTACCGCAATCATCGGCGTCTCGAAGCAAGTCGGAGAGGAAACCGAAAGTCGCACCACCCGCCCAACCATCCCCATCAAAACCTGCTTTACCCGCGCCCACGAATCTCCAAAATGCAAAAGTCCCACCATTCCCCTTCGCACCGTTCCTACCGCAATCCGGTGCAACCGTCCCAAATTCCCTGCTACCTTTCTTCCCATTATTGTTGTCGAATTTATACGGGCAGACACCACCCGGCTTGTTCTCTGCAAACCAAATCCCCCCCGAAATATTGCAGCTCTATAAGAACTTACCGGCAATGATGCCAGGTAGTGGATCAGGTGTGGGAGCAGCTGGTGGTACAGTGCCAGttacaaaaagttaa
- Protein Sequence
- MYSYKVSNEILSFYFQVVGGPCGFHGPYTFYKGLEIVPQTFNGINGTYMRNHNSLNGSNNTHLFPNNGGSKITKHLTRKCSNDKRSDAACNDSSNTRLKKPLILALGDCIPVRPWSDSPIACLAEVRMIWRDRNEPSLLTGLRLYFLPENTPMGRNGHGEDEVVAISDKVVIRAEDLLNWIDDRLQWNWGLVRAPASSKDLSGSCSKARNHFVSEKSSSDVMEDPLACPTVTTSLSLRNSQLDFSDVEREKRLDSNTTTRVAVLTYPRYCRYRATLKRLENVNDEWFRNSIVAALCGFSSISSDMRVMFCRDTFDYPELETHELLCNHLAPKLKGRPRGRKKKYRSESPFSGGKRNDSGSETNDSDISIFSVGKNVSIKVEPRPHLRFNHRPARTKSKSETEGKSFRPYESRRDTEDEGKSHKSARLQTKTELAVYNRKPSSMEKTGKFLKVASSTSVTKIANPKPSTTATTTVRTASSTTSPTTPSEEKFFLRKLHEFHVKHGNVIPKMLWMNLKNVYLYAIFRQVKKLGGYDAVTIKKQWKTLFGENNEPHLSITRRKYEKILLPLERSELVTKKQPSTTVSGKAEKSEARKEMKETKVNKEEQVLKDEDDSVEQLSSDSGDAQSTSSSPSSPQVPSIKFSIKKEKRSDSESELSKEEMTAIQNKVKAKTTGPGEGQEVDVKPILPQSSEPVTLGTSTGANKSPERSSSVPVEQITTPISVPLTVIVESPEGNRKRSPSDEDVKPVISTIPVEVSTEATSEDAKGRKSTSSQKIQIQQPHTTITVHQTTIHPQTHSKNSASNQITNQIQITNQIQIQQFTVQPTPSDSPSSVPKSSEIRCNIKHELDGSQEVKIENRDLGGDSSNMKEEKVKASTSSTSLRTTVRVKNELKPFEKENIPFIAAGTTITPVISQPRKTTDVIDLADSDGESSSSFPSKRKTNSSQESAAVPPVKKRKLDILREGGLEVTAISNTHGVISTSPILPDISLRIPSHTSVQPVDEKFSLPATTSLTIPNPNGVRNNLPKVATPSIFSKTSKIFGNPKDILQTRTPAHAPTGVEQILDLTVKSPLKCPSLEIHPIPSARRNRSPPGAGSGTSSTSTAIPINLSQSSKSKLAENGLQITLVPQSNQFHGGVVPPNQRLAAPLTHTQSIHNSQNHNINKRKPTIDVIQVPTPRTPVYGRVPQSSASRSKSERKPKVAPPAQPSPSKPALPAPTNLQNAKVPPFPFAPFLPQSGATVPNSLLPFFPLLLSNLYGQTPPGLFSANQIPPEILQLYKNLPAMMPGSGSGVGAAGGTVPVTKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01087792;
- 90% Identity
- -
- 80% Identity
- -