Ssin030107.1
Basic Information
- Insect
- Stratiomys singularior
- Gene Symbol
- jarid2b
- Assembly
- GCA_954870665.1
- Location
- OX940880.1:73456005-73461600[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-22 2e-18 67.7 0.0 7 89 1288 1368 1283 1368 0.93
Sequence Information
- Coding Sequence
- atgggaAGCATTGGCTATGCAGCTTGCAAAAAAGGAGAGCAAAGTTTAGAAAGTAATCGAAAATGCAAACAGAATGAAAAGTTGGTAACGTTGCGGGAAAGAGCAAAGAAGTTCCAAACAAATCGTCGATCTCCTAGAACAAGATCAGCTGTAAACCTAGAAAACAAATATGGGGACGCCGATTCAGCGATTGTCGGAATTTCCGTACAAAATCCTACACATACTAAAAGGTCGCAAATGAAAGTGCAGCGAAAGTCGTCCGTCCAAAGGAAAAAAACACCACGAACTTTATCTGCACAGCTTAACAAAAGGGAACATGATTCAAAAAACGTttccgaaaacaaaagaaatacgaTTAATTTTGTTACACCTCCCTGTCTAGATTTGCCAGAAACTTCAAAGCAAAAACCTTCGTCTGATCTCGAGGATCAAACATCAAATGTTccagaaaaacaaataacttaTTTGCATGAAGAAATTGTCTCTCCTTTTCTGGAGGATAAGTCATACGGATTCAATCCAGTACCATTGTTTCCTGGAAAACAAGAAATACTGACTGTGCAAACGCGTAAACCCTCAATGGCGGAAAAGTGTGTATCGAAAACAATTGAGAAAATCGAAGACTCTGCAGACAATACTTCTGATATTAACACGAAAATGTCCTATGGTTGTCTTAAAAAAGGCCCTGTAAAGCGAATCATTAAAGAAAAACCGAAGGCGGACCAAGAGAATCATGAAGAGGTCGTTGATATTACACCACCCAAACCAAAAAGAGGAAGGAAGATTGTTGAAAAAACGTCCAAAGGGAACGTGCCACAAGTCGAGAATAAGGTAGCTgcgattgtaaataaaacgtgTCGCCCAATGCGTAAAACAAAAGAAGCTGCAACCATATACATGGAGTGGATTGGGCTTAAACTTAATCTCGATGAAGATGGGTCTTCTTTGGATAGTTTTCCGGAATTACCAAATGCTagagaaacacaaaaaatagaaaacgaactaaaaaaatatggtttaaaacaaaataagccTTCGAGACAGACTCCAattaaaagaagcaaaaaaaatcagACTTCCACCATCTGCAAGTCCATTTCTGCATGTGAAGAACTAGTAAGGGCTGATCAACAAGAGCTCGAGGGATTGGAAAACAttgacaaaagaaaaagtttcagcGATTCGGACGATGAACCACTGGTTCCTCAAAAAGTGGAAATAGAGTCTCAATTACAAACAAAAGTCATCAGAGcgcaaaaaaaatccaaatctcCGAAACTATCACGTAAGAAAAAGCCAGTGGTCgtagcaaaaaaaggaaaacatgcaaaaaatattGTGTCTCTAAAAAATCACACTGGCTTTgaagagaaattttcaaatgagaactgtccagaaaaaaataatgagaatgtAGTCGAAAGCAGCGTTATGGGTGCCAGAAGCTATAGCGATTCGGATGATGAACCTTTAGCAACAAAGCTTGTAATTAAAATAGTTGAGAAGGAACTTAAGGCTGATCCTGAGCCGCTTCAAATAATTACTAAAATAACTCCAGTCTCACTCCCTCCTAATGATAAACTAATTTCTCCAAGCGGCAATTTTTCGTCTATACGTAATATGTTTCAATTTGAAGAGAGACCATTATCTGAATGCCTTAGTTCACAAAAATGTCTAGTGAGACCTTCATCGCAGGATTCCCCGACTACAATACCCCCTGTAGAACCGTCAATAGTACTACCACCACCTCACAGACCAGATCAAATGATAAAGTCAATTATACCACTTCCTGTGACTACTCCCCCAGAGCCTTTTACACCATTAGAACGATTTCCGTCACCGAAAGTGAATCCTTCGTTTTTAACtccaaaatttgacagaaatttgGAGAGAAAATTGCCTGCGGAAAGCGTGGCATCGACACAGAAAAGTAATTTACCGTCTCCATCAGTTCCTAAAACGGATTTACCAAGCACCAAGTCCGTTTCACCAAGCAGTTGCGGTaacatgaaaaaattcgaaGTAAACCCGGATCTTTCTGCAAATCTGATGCCCAGTAAAGAAGAATctggaaaaatttttggaattgctAGTGTAAGTCTAGCTCAAAGTTCAGGACCGGATAACACAAAGTGCACACTTGGAAAATGTGGTTCAATACATAAGCCTGTTTTAGGGCCGGTGGTTCCAACAGAAGCATATTTAGGCGAACCGCTGTCCAGCAGGGAGCGCAGAAAAGCTAAAGTAAACATGACTCATGAACAAATTCAGAAGTGGCTAATAGAATGTTCTTCGAATCCTGATGAAATTCAAGATGATTTAGATGACGATTTTGAAGAACCATTAAAACCGCAAACATTTGCTCCTACACCACCACTATTGCGAGAAGAAATGAACTCTTCGATAGTGCCAAAAATCGGTAAGGAGTTGCGGTCTGAGAATATATGGACTAGTAAAGGACCATCTTTGAAAGCGACACCTGTGGTAATGAAAGACTGTGATGAAGAAGTTTTAGCTAAACGAAAGTCTTCATCAGAGAGTCAAAGTTCTCGAAATCCTGTAAAAACAATTGAGAATCCTACCGAAGGCAAGTTATCTTCTAGGATGACACTTAATAGATCTGGATCAGTATCCAAACTTTCTCGTGAAGCTACGAAGTCACCCAAACCCTCGACCTCTTCTGCTACATCCTCTCCTAATCGGCTTAAGAATACTAAAACCATTCCAGATAATCAAAAATTGCTTAGTGTTCCCAGAAAACCTGTTTATAGCACAAAGCCTCAAACAATGTATAGAAGTGAGAAGAAACCAtcaaataatagtttttcaGCGTTTTCCCCAGAAAACGAAACCAGTGTATATTCATTTGATAAAGAAGATGACGTCCCACCACCCGTTGCAAAACCGTTCAGACGTCATAGCCGACGAGAATCGAACGCTGATGAGAATATTTCAAGCGATAAGCATAGTAAAATAGAAAAGATACCATCGAAGGAAACTCAACAAAGTAGCGTTTCATTAATGCTTAGCCCAGAAGAGGGTACTAAATCAATTAAAGTAAGCTTGGAGAATAGAGAAGAAATATCAATTGCAAATATTGCCAAACCGCATGGGGACACGTCTGTCGTTGGAGATTCAGATTCGGAGGGTCATACATTTTATATTCCTTTACAAGGCACCAGCGCAGCAGGCGCGCACTCTGGTAAGGCAGATGTCATACAAGGAGTAGCGGTTAAACTTGGTCGAGAGGGTCCAGAAGGACCAAATCAACGTGTTATTATGCACGCTACGTTGGTTACGAAAGCCCAAATGGGGTCAAATACAAAACCAATTCCAGAATCAATGAATGTTCATGAAATCGTTAAAAGTTTATTATCAACtaataaagaaatttcaacGTCAGCTGGCTCGAAAAATGTTCCAGTGGGAACGGTTCAACCTCGATTTAAATCAAATGTAGAGGGGCAAATTAAAATAGGGTCGTCTTTAACTAGAGTGAACTCAAATTCTTCCCTTCTTTCTGCTTCTACAAAGTCAAAGAATGCATCTATAACTGTTCAAAAGAAGCCTTGTGATGCAACGCCGatcaaaatgttgaataacaCAGCTTTTCCCCGTCGGGATGATCCTACACAAATGGTTGAAGCGCCGATTTTCCGACCTACTGACAAAGAATTTCAAGACCCTATTGAATTCATCGATAGAATTACGCCAATCGCAGCTCGATTCGGTATATGCAAAATTATTCCCCCAGATAGCTTTAAGCCTGAATGTCGTGTTTCAGATGATATGCGTTTCACAGCATATAATCAATATGTTCATAAAATGCTACATCGCTGGGGACCCAGCGCAAAAGAATTTAGTGCAATCAAGAAATATTTAGCAACCCAAAGCATTGCTATGAGTCATCCACCTTGGATCGGTGGTATGGAAGTAGACTTACCGCGGCTTTATCATACTGTTCAAGAGCTTGGAGGGCTTAAAGAagttatcgaaaaaaaaaagtggGCTCGAGTAGCTGAGGAAATGTGTATTCCAAAATTAGCTCAGGATCGTGTTACTAAATTAGACGATATATACTGCAAATATCTTTTACCTTACGATACTTTGTCGCCGGTCGAAAGGCAAAAACTTTTTGATGAGGTGGAAGCAGATTGGGCAAAGCGTGAGGCACGAGCCAGAAGGAATGCAGACAGGTGTGTAAATCTGGAAAGCATTAGTAATGCGGACTGTGATTCaagtgaaaatgaagaaactGACGAAGAAGTTGATGGTGTTTCAATGGAGTGCATTGTTAAAGGCAGAAGTATGCCCTTGAATGCTTTCTTTCGAATTGCAAGGAATACAATGGCTCTATGGTTCAAGAATACTGAACCAACAGTAGCCGAAATTGAGGCGGAATTTTGGCGTCACGTAGCAGTAAGAGATAGCCATGTTTGCGTACATTCTGGTTCTATAGACTCAAGTGGGTGGGGCTATGGTTTTCCCAGCCCCGGTCCAAAAACGAAAGGATCGCAGTGCGCTAAACATCCGTGGAATTTGAAGATCTTAACAAACAATGCAGGATCAGTGTTAAGATCTTTAGGACCAGTAATGGGTGTAACTGTTCCAACGTTGCATGTAGGCATGTTGTTTAGTGCGTGTTGCTGGTATCGTGATCCTCATGGTCTGTCGTGGATAGAGTATCTTCATACGGGAGCAAGCAAAATATGGTATGGTATTCCTGACGAACAAAGCtcgaaatttcgaaaagcaTTGACTGCTCTTATTCCAACACACTGTCAGAATAAGACCATTTGGTTGCCTTGCGATACTGCGATGGTACCACCACATATGTTGACAGACCGAGGAGTGTCCCTTTGTCGAGTTGACCAAAAACCAGGAGAATTTGTAGTGGTTTTCCCACGGGCGTATACTTCAAGCATAGCAACAGGATATGTTGTTTCTGAGAGCGTGTATTTCGCCACGAGTTCTTGGTTAGATTCGGCGAAAGATGACTTTAAGgATATTCATGAAAGTTGTGAGCCTGCAATGTTCTCATTAGAACAACTTTTGTTTGCAGTTGCTAATGATCAACGAGcctcaatgaaaattttgtctcAAGTAGTTCCCATGTTAGGTGAGGTATTTAAAAAGGAAGTAGCAGCGAGAAATCAATTGGAGgcaGCTGGActgacagaaaaagaaaaattacagcCCCCGGCTGTAAAAAGCAAGCATAAATTACAATTACCTGAGGAGCATGAATGTGACTTTTGTCGAGCTAATTTGTACATATCAATGATAAAGACAACAGAAGGAAACATTTACTGTCTGCAACATGCATTACACTATATTAACAACGGCATTATTCAGGCTAAGCAGTGTACACTAATTTTTACGTATGATATAGAAGATATACAAACTTTAATAACGAAGATAAAAGATAAACTAACCCAACTTAAGAAGAAAGGTGCAACTAGCATAGGAACAAGTAAGAAAGCGCCAAAATga
- Protein Sequence
- MGSIGYAACKKGEQSLESNRKCKQNEKLVTLRERAKKFQTNRRSPRTRSAVNLENKYGDADSAIVGISVQNPTHTKRSQMKVQRKSSVQRKKTPRTLSAQLNKREHDSKNVSENKRNTINFVTPPCLDLPETSKQKPSSDLEDQTSNVPEKQITYLHEEIVSPFLEDKSYGFNPVPLFPGKQEILTVQTRKPSMAEKCVSKTIEKIEDSADNTSDINTKMSYGCLKKGPVKRIIKEKPKADQENHEEVVDITPPKPKRGRKIVEKTSKGNVPQVENKVAAIVNKTCRPMRKTKEAATIYMEWIGLKLNLDEDGSSLDSFPELPNARETQKIENELKKYGLKQNKPSRQTPIKRSKKNQTSTICKSISACEELVRADQQELEGLENIDKRKSFSDSDDEPLVPQKVEIESQLQTKVIRAQKKSKSPKLSRKKKPVVVAKKGKHAKNIVSLKNHTGFEEKFSNENCPEKNNENVVESSVMGARSYSDSDDEPLATKLVIKIVEKELKADPEPLQIITKITPVSLPPNDKLISPSGNFSSIRNMFQFEERPLSECLSSQKCLVRPSSQDSPTTIPPVEPSIVLPPPHRPDQMIKSIIPLPVTTPPEPFTPLERFPSPKVNPSFLTPKFDRNLERKLPAESVASTQKSNLPSPSVPKTDLPSTKSVSPSSCGNMKKFEVNPDLSANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEAYLGEPLSSRERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFEEPLKPQTFAPTPPLLREEMNSSIVPKIGKELRSENIWTSKGPSLKATPVVMKDCDEEVLAKRKSSSESQSSRNPVKTIENPTEGKLSSRMTLNRSGSVSKLSREATKSPKPSTSSATSSPNRLKNTKTIPDNQKLLSVPRKPVYSTKPQTMYRSEKKPSNNSFSAFSPENETSVYSFDKEDDVPPPVAKPFRRHSRRESNADENISSDKHSKIEKIPSKETQQSSVSLMLSPEEGTKSIKVSLENREEISIANIAKPHGDTSVVGDSDSEGHTFYIPLQGTSAAGAHSGKADVIQGVAVKLGREGPEGPNQRVIMHATLVTKAQMGSNTKPIPESMNVHEIVKSLLSTNKEISTSAGSKNVPVGTVQPRFKSNVEGQIKIGSSLTRVNSNSSLLSASTKSKNASITVQKKPCDATPIKMLNNTAFPRRDDPTQMVEAPIFRPTDKEFQDPIEFIDRITPIAARFGICKIIPPDSFKPECRVSDDMRFTAYNQYVHKMLHRWGPSAKEFSAIKKYLATQSIAMSHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPVERQKLFDEVEADWAKREARARRNADRCVNLESISNADCDSSENEETDEEVDGVSMECIVKGRSMPLNAFFRIARNTMALWFKNTEPTVAEIEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKTKGSQCAKHPWNLKILTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKIWYGIPDEQSSKFRKALTALIPTHCQNKTIWLPCDTAMVPPHMLTDRGVSLCRVDQKPGEFVVVFPRAYTSSIATGYVVSESVYFATSSWLDSAKDDFKDIHESCEPAMFSLEQLLFAVANDQRASMKILSQVVPMLGEVFKKEVAARNQLEAAGLTEKEKLQPPAVKSKHKLQLPEEHECDFCRANLYISMIKTTEGNIYCLQHALHYINNGIIQAKQCTLIFTYDIEDIQTLITKIKDKLTQLKKKGATSIGTSKKAPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -