Basic Information

Gene Symbol
Arid2
Assembly
GCA_954870665.1
Location
OX940878.1:13100459-13109872[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-25 1e-21 78.3 0.1 2 89 47 132 46 132 0.95
2 2 3 1.5e+04 -2.4 0.1 39 62 1471 1493 1444 1508 0.63

Sequence Information

Coding Sequence
atgaCGACTTCGGACTTGAAAGATTCGAATAGTAAAGAAAACACCCAAACAGAAGATTCCGTTAGTAGTACAACGAAAGGTAGTGCCAGTGCAAAGAAGTCAAGCGGACGGACAGATTTCGTGTATGATGCACGGGATCGGGAATCGTTCTACAAAGACTTGCAGGCGTTTCATGAAAGTCGAAACACTCATATTGCAAGATTTCCAAAGATCAATGGAAAAGAGGTTGATTTGCATAAATTATATGCCGAAGTGGTCAAACGGGGCGGATGGCTGAAGGTCAATATTCGAAATGAATGGGACGACCTATTGCATATATTAGGAATAAAGCAGAAGTGTGTGAATGCCACCGTCGcactaaaatatatttacacCCGTTACTTGGATAAATATGAGCGCTTGCACTTCTTGGGTGAGGATCCCGATCGTGTCGACGAGCCTGATGACGAGGGACGTCATAAAAAATGGTCAACTAAGACATTTCACACAGTCCCGATGACATATAACTACAGCCAACATCAAATTGCCGAGCCATTGCGAATATTGCATCGTTTGTCGACTGATATGTACAAGCCAACAGAATAcgataaattgattttatctttGCTATCACCTCTGCCAAATGAACAGGATTTCGCGATCAATGTCTGTACTTTAATGGCCAATGAAAGTCAACATACACTGAAATTAGATCATTGTCCAAAGCTTGTGGATGCTTTGATGGCACACGCAGGAGTTTTTGGTCATTTTACCATGCGAGATATTTTCACTGAGATGTACACAAAAATTCGACGACATTCTCTGCAAACATTCTGGACTGATTGTTTGTACGATAAACCCCCAATTCTCGAACTATCTTATGACGACTACTATCAAGCTCCAGATGAAAAATTTGCTGATATTGGTGCGTTCCGACCGTATGAACGATCACCAGGTGAATCCGATGATAAAAAGGCCGTTGATCCGGAGGAGTATAAAAATGATGTCGCAAGATATGATTTTCTATGCTTGGGACGTGGACTAGGAACGCATGATTATATTGGGCAGAGGGTTCTTCAAGTCACATCAATTATgcgaaatttaagttttttcgaGGAGAATTTGTCCGTCCTCTCATCGAATAGGACTTTTATAAGATTTTTAGTGATGTGCTCGAATATAAGATGGGGAAATGTACACCACATGGCATTAGATATTTTCGGGAATATAGCGACACTAGTTAGTCTCCAAGATCCAACATCAGATGAGTTGACCCGATGTATACTATCAACGCTTTGCGAAGGCCTGGAGGGGCAAGATCGTGGAGTCATTATAAGCtgtttagaaattttgaataaactatCTCAGAAAGattcaaactcaaaaaatcTGAACAAATGTTTGGATTTCAAAACGTATAATCAAATATGTCTGTTTCTGGCTTTGAATGACATTATGCTATTGCTTTACACACTCGAATGTCTATATGGATTGAGTTCACTTGGTCCGCGGCCTTGTAATTCTATAATTCAGGTTAAAGGCATTGTTGATACATTGGTTTCTCTTATCACTGTTGAGGCACAAAGCTACGGTCCTGACGGTTGTATTTTAATGCGTGTTGTTGAAACAGTCCCGGGAAATATGCTTCCGATGGTTGCTCAAAACATTGCAAATTTACAAAATGTGGCTATGCAGGGACATGTCTTGGCAGTGAAGAAAGAGCACACTGATTCACCTCATATACCGACTTCCTCGATCGAATCTCAAAAATCTATAACTGCAACACCATGTACTCCTATCAGAACAGTTATCCAACCACCAAAAGAGAGTTCGCAAAGCCCGCAGACTCCCATAGCTGCAAAAAATACTCCCAATGTTCAAGAGACTGATCCTTTCGCGCTTGCCTGGGTGACTGCTACATTCGAGTCAGTTTCATCAGCCAGTAGCCGCGTTGAACAACAAGAGTTGTATAAAATGTATTTGGCCGCGTGTCAGAAAGCGGGCCGTCGTGGCATTGTATCTCCTATACATTTCCCGCAAGTTGTGCGCGCAGTTTTGGGAACAAATGTTGGGCCAAGCTTGATCAAGACTACTGAGCCAAATGGAATTGAACTAAATGCATTTTACTATATTAACATTCGCGTTCGTGCGAATCCAATGCCAGTTCAATATAAAGCCCCCAATGCACCAACACATTCACCTTCGAACCAACCTCTACAAAAAGCAATTCCGAAAAATCAACTTCAAGCTCCTATGGTCCAACAAACCCCAGGAAAAACTGTACAGGCTCCTATAGCGGAAGCATCGAATAATAAAAAACCTGAAAACACACAGAAAGGAAAAGTAAATAAGAAATCTCAAGTGCCAGTGCCTCTAGTGCAATCACCAGTGACACAAGCTCAACAACAACCATCGACAGCACAAACGCTTCTACCGGCACAATCATCATTAACAGCAAGTCAAAAGCAGCCCCAACAGCTTCAAATTCAACAAACAGGCCAAGTCCAGCAACCTGTCATACAACAAGCTGCACAAGCGCAGCAGCCACCGCAAATTGTAACCCAGTTGCAAGAAAATCAACTTGTGGCTGGGAAGCATGTTATCATTAGCCATAGTGTAACTTCGCAGCCTGTTATCCAGAAGGCAGCGCCTGCACATCAACCTATACAAGCAACAATGGAATCGAATCAAATGAGTGTAATACAACCACCTCAACAACAACCTCAAATTCAATTACAGCATGCGCAAATCGCACAACAATCCCACATGTCGCCGCAACAAATGCAAGTGCAGCAGCAACAAGTAAATTTGCAGCCACAACAACAAATGCAGATTCAACAGCAACCCCAGCCAATGCAAATTGCTCAACCGCAGCAAATTCAGCTACAGCAAACAGCGCAACAACAAATGACACATATTGTTCCGAATTCGGCGAATGCGGCAATCATTCAGGGCAACGGAAATATGCCGCAAACATCCTCGTCTCTAATTAAAAGCCTACTGGCCAATAAGgttGTCCAACGACAACAAATGAAACAGAAAGAGCTAGCACAGCAACAGTTACAACAGCAGCAACATATACAGCAACAACAAAGTGTTCCTCATGCGACAATCAGCTCTCTAATGAATAATCCCATAATACCGGCAAGTGCAGTTAAAGTTGGCCAAACAACTATTAAAGCAATCACATCAAACGCTGTGCTACCAGCTTCAGTGATTGAGAAGAAACCAGTACAGCCAGTGCAATCGACACAACTTCCTCAGGCCACCACAGAAGCAACAGAACCTGCTAATTCACAATGGGATCCAGTGCCGCCATTAGCTCCTCTGAGTGGCAACAtgcaaaatgttaaaatacatAGCAATGTTTTAATAACACCTGGAAATGATGACTCAAATTCTACAGGTAATAATTCAGTAGCATCAAGTGCCATAAGTTCGACACAAGTTGTAACAACTGATGATGGAGAAGGATCGTTAATCAGTTTCGAGGGACTTTTAGTACCGAAATCAGGCAGCAATTCGACAACAGAAGACGAAGCTTCGAAGGATTCTTTCAATAGAACGGCACAAATATTTCAGGGTAATCAAATGCTTATTGATTTGCTTGATAAAAAATCGCCAGATCCACCGGCGCCTTTAGctggaatgaaaagaaaatttgatgatgATTCTGCATCTGACGAAGTTAATATTCAAAAGCGACTGGCAACCGATAACGAAGATATTGATGAAGAAGAGGACATGCCAATGGTTCAGGCATCTAAAAATGCCGCGAACCTTTATGCAGAAATGGCAGCATCAATCTTAGAAGACGAAGATCTTGACGATGAGCCTGAGCTTGAGGATTCAATCCCTGTTATTCAGCCTCCTGAGCAGAAGCAGATGATTACGATGCCTGTGCCGATTCAACGCCAGATTATTATGGGACCCAATAATCAAGTAATATTAACGCAACCTGGTCAACCAGTAAATCAGCCTGTTCCACCACAGGCAACagcaacaataaaaacagaTTCGGGTCTGCAAACGGTGCCGctaattatccaaaaacaaatCGGCCCAAACGGGCAGCAGATTATACAACCAGTgttacaacagcaacaacagcaaccaCAAACTCAATACATGCTTGCAACGAATCCGCAAGGCCAAACATATCTGGTTGCTCAGCAGCAGCCTTCACAACAACCAATGAATCCAGCATTGTTGTTAGCCCAAGCAGGACAACAGCAAGGAcctcaaacaaaaacaataattatacTACAACAGCAGGGGGGTCCTCCACAAGCTGTAGCGCAACAACAAGTCATATCTAACCCAGCTGGTCAACAGAAAGTTATTATGACTACTCAACAAGGTCAGCAAATGATAGTAACACAAGTTCCCCGTCCGCTACATCATCAGATAATCGTAAACAATTCCAATTCCAATATGATGCAGAACGGCGGGTCGCAAAATGTTATAATATCTCAAAATAGTCCCATCGTTCAACAATCGCCCATGCACCAACAGCAAACTATGACATCTCAACCTCAGATTCAAATCGCACCGTCTCAGTCAGGtcaacaacaatttcaaattcaaacttcCAATTTACCCCCGCAGCAAATTCAGATTCAGGTTCCTTCCACCCAAGCACAAATGCAAATTCAGACGGCACCTTCTCAATCGCCAATGCAAGTGCAGTCATCAGTTATGGCGCCGCATCAAATCCAAATCCAATCGGCACAGCATTCAGTCATCCAAAAACAAGTTCATATTCCTCAGCAAGGAAGTGGAGCTTCGATGCAGTTACCACAAAATACAATCCAAACACAATCAAATCAGCAATCGGTAACAATTCAAGGACCAGTCGTTCAGCAAAGCCAGACCACCATCCCGgttcaaacaaatcaacatcAATCTATCCAACAACAACAAGCATCAATTTTATCTCAATTACCACAAATACCTGCAACAATTAAAATTCATCCCTCTGCTATGCAATCTCAACCAGCGCAGGTTCAGAACATGTCCAAATTGCCTACGAAGACGCAACTTCCCGTCGCTCAGCAACCTGCATTGTCTCAAACGCCACCACCACAACAACAATCCGTAATTCAAGCACCACAGCCTCGGCCCGAAGTAAAAAGGCAAATTATTATGACAGGGTCAGGAGCAATCGAACTGCAAGAGAATACAAAACGTAGTCAAACACCAACACCAATCCAACAATCAAATACTGCACAAATGACTACTGCAAATATTCAACAAGTCCCGTCACCCGTCCAAAACACGATGGCGAATGTACAGCATTCGCATTTACAACTTCAAGGGCAAtttcaacagcaacaacaacagcccACGCAACAAGTCACAACAGGAAGAGTTAGCCGATCTACTACCGATTCTCCGGGTCCCGATGAAGATAATTTTGATCCAAATTGGATGTGGATTTGTGATTGGCGAGCATGTCCTAGGAAACAGTTCAGATCATTGGCAGAAGTATATAAACATGCATGTACGGTGCATTGTCCAGATAGCTTGGATCCATCTGCTGAAATTTATTGTCAATGGGGACCAGGGAGTGGGCTTTGTGATAATATCCCTCGCAAACGATATTCCTTGATGACTCATTTGTTGGATCGACATTGCACAGCAGATTCCTTCAAAGCCGCCTTGCAAAGGCGGTTAACAACTGGTGTTCAACCACCAACTCATGGCCAACCTGTGACAATCATAAAAAATGTTCCATCAAATTCGAACGACTCGCGCGGAACAGCATCTCCTGCTTTGTCGACATCTTCGGGTAGTTCACTTCCACCAGCTGCAAGTGCAGCAATGCACGCTATAAAGCGACATTCTAATGACTTCGTCAATCCAAAAGAGTTAATGGATGAAAATGAAGGTCCTGTTACGAAAAGTATTCGCTTAACGGCTGCATTGATTTTACGCAATCTGGTCACGcatacttcactagcaaaaaggAATATACGGTGCTACGAGCCTCATTTAGCTGGCGTGGCTCTTAGTAATGTAGAATCGAGTCGAATTATTTCTCAGATTCTCTATGAGTTAAATAATTGA
Protein Sequence
MTTSDLKDSNSKENTQTEDSVSSTTKGSASAKKSSGRTDFVYDARDRESFYKDLQAFHESRNTHIARFPKINGKEVDLHKLYAEVVKRGGWLKVNIRNEWDDLLHILGIKQKCVNATVALKYIYTRYLDKYERLHFLGEDPDRVDEPDDEGRHKKWSTKTFHTVPMTYNYSQHQIAEPLRILHRLSTDMYKPTEYDKLILSLLSPLPNEQDFAINVCTLMANESQHTLKLDHCPKLVDALMAHAGVFGHFTMRDIFTEMYTKIRRHSLQTFWTDCLYDKPPILELSYDDYYQAPDEKFADIGAFRPYERSPGESDDKKAVDPEEYKNDVARYDFLCLGRGLGTHDYIGQRVLQVTSIMRNLSFFEENLSVLSSNRTFIRFLVMCSNIRWGNVHHMALDIFGNIATLVSLQDPTSDELTRCILSTLCEGLEGQDRGVIISCLEILNKLSQKDSNSKNLNKCLDFKTYNQICLFLALNDIMLLLYTLECLYGLSSLGPRPCNSIIQVKGIVDTLVSLITVEAQSYGPDGCILMRVVETVPGNMLPMVAQNIANLQNVAMQGHVLAVKKEHTDSPHIPTSSIESQKSITATPCTPIRTVIQPPKESSQSPQTPIAAKNTPNVQETDPFALAWVTATFESVSSASSRVEQQELYKMYLAACQKAGRRGIVSPIHFPQVVRAVLGTNVGPSLIKTTEPNGIELNAFYYINIRVRANPMPVQYKAPNAPTHSPSNQPLQKAIPKNQLQAPMVQQTPGKTVQAPIAEASNNKKPENTQKGKVNKKSQVPVPLVQSPVTQAQQQPSTAQTLLPAQSSLTASQKQPQQLQIQQTGQVQQPVIQQAAQAQQPPQIVTQLQENQLVAGKHVIISHSVTSQPVIQKAAPAHQPIQATMESNQMSVIQPPQQQPQIQLQHAQIAQQSHMSPQQMQVQQQQVNLQPQQQMQIQQQPQPMQIAQPQQIQLQQTAQQQMTHIVPNSANAAIIQGNGNMPQTSSSLIKSLLANKVVQRQQMKQKELAQQQLQQQQHIQQQQSVPHATISSLMNNPIIPASAVKVGQTTIKAITSNAVLPASVIEKKPVQPVQSTQLPQATTEATEPANSQWDPVPPLAPLSGNMQNVKIHSNVLITPGNDDSNSTGNNSVASSAISSTQVVTTDDGEGSLISFEGLLVPKSGSNSTTEDEASKDSFNRTAQIFQGNQMLIDLLDKKSPDPPAPLAGMKRKFDDDSASDEVNIQKRLATDNEDIDEEEDMPMVQASKNAANLYAEMAASILEDEDLDDEPELEDSIPVIQPPEQKQMITMPVPIQRQIIMGPNNQVILTQPGQPVNQPVPPQATATIKTDSGLQTVPLIIQKQIGPNGQQIIQPVLQQQQQQPQTQYMLATNPQGQTYLVAQQQPSQQPMNPALLLAQAGQQQGPQTKTIIILQQQGGPPQAVAQQQVISNPAGQQKVIMTTQQGQQMIVTQVPRPLHHQIIVNNSNSNMMQNGGSQNVIISQNSPIVQQSPMHQQQTMTSQPQIQIAPSQSGQQQFQIQTSNLPPQQIQIQVPSTQAQMQIQTAPSQSPMQVQSSVMAPHQIQIQSAQHSVIQKQVHIPQQGSGASMQLPQNTIQTQSNQQSVTIQGPVVQQSQTTIPVQTNQHQSIQQQQASILSQLPQIPATIKIHPSAMQSQPAQVQNMSKLPTKTQLPVAQQPALSQTPPPQQQSVIQAPQPRPEVKRQIIMTGSGAIELQENTKRSQTPTPIQQSNTAQMTTANIQQVPSPVQNTMANVQHSHLQLQGQFQQQQQQPTQQVTTGRVSRSTTDSPGPDEDNFDPNWMWICDWRACPRKQFRSLAEVYKHACTVHCPDSLDPSAEIYCQWGPGSGLCDNIPRKRYSLMTHLLDRHCTADSFKAALQRRLTTGVQPPTHGQPVTIIKNVPSNSNDSRGTASPALSTSSGSSLPPAASAAMHAIKRHSNDFVNPKELMDENEGPVTKSIRLTAALILRNLVTHTSLAKRNIRCYEPHLAGVALSNVESSRIISQILYELNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-