Scal010057.1
Basic Information
- Insect
- Stomoxys calcitrans
- Gene Symbol
- nfxl1
- Assembly
- GCA_001015335.1
- Location
- NW:221496-224770[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 1.4e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 20 0.13 8.9e+02 -0.3 0.4 4 10 192 198 191 198 0.95 3 20 1.8e-08 0.00012 21.6 16.0 1 18 206 222 206 223 0.98 4 20 1.6 1.1e+04 -3.8 1.8 6 10 249 253 248 253 0.89 5 20 2e-06 0.014 15.1 17.1 1 19 259 278 259 278 0.97 6 20 2 1.4e+04 -4.5 1.0 6 10 303 307 303 307 0.93 7 20 3.3e-06 0.023 14.3 11.1 1 19 313 331 313 331 0.93 8 20 0.9 6.2e+03 -3.0 0.5 1 7 356 361 355 363 0.49 9 20 4e-06 0.028 14.1 10.3 3 18 368 383 366 384 0.89 10 20 0.31 2.1e+03 -1.5 0.4 1 5 393 397 393 402 0.75 11 20 2 1.4e+04 -5.0 2.3 5 10 407 412 407 412 0.91 12 20 0.024 1.6e+02 2.0 15.9 1 18 418 435 418 436 0.91 13 20 1.6e-10 1.1e-06 28.2 14.5 1 19 445 463 445 463 0.98 14 20 0.053 3.7e+02 0.9 9.9 9 19 508 518 499 518 0.89 15 20 0.0096 66 3.3 5.3 1 11 530 539 530 540 0.95 16 20 0.33 2.2e+03 -1.6 0.9 6 10 599 603 598 603 0.90 17 20 0.00056 3.8 7.3 10.4 1 11 609 619 609 620 0.97 18 20 0.1 7.2e+02 -0.0 19.0 3 19 649 665 648 665 0.92 19 20 2 1.4e+04 -5.5 2.1 9 13 671 675 670 675 0.72 20 20 1.9e-07 0.0013 18.3 11.3 1 17 716 734 716 736 0.86
Sequence Information
- Coding Sequence
- ATGGCACCtcctaaaaataaaagccaACCTCAGAGTTCCAATGCTTCGCAAaagttcaatgaaattcacGCCAAGAACATAGATGTAGCCAAAAAGATGGTTGAGAACTACGAATCGTCTTCGGAAGAGGAAGAATTGGATGAAAAAACCATTTTGGATTCCCTTTACAAACATTACGACAAACGTAAGGTGGATGATCATTTGTTGGCAAAAACCAGCAGCTTTTTGGAGAATGTCTTACATTCCGGTGCCGCTACGTGCCTCATATGCATAGGCAGCATAAAACGTGCTGAAGCTATATGGTCATGTAAACATTGCTATTGTTTCTTCCACTTGAATTGTATAAGGAGATGGGCCAATGACAGTTTGGCACAAATCAAGGCTCAGTCCCAAAATGACCAACAGGGGTATTACAATCATCTGGGCGAATATATACCGCCGAAAAAGATAAAATCTCTTCATTGGTGTTGTCCACAATGCCGCAAGGAGTTTCTAACTGAAGATAGACCTTCCAAGTATGAGTGTTTTTGTGGAAAAGAAGAGAATCCACCATCACAGCCGTGGCTGGTCCCTCATTCATGTGGTGAAATATGTGGAAAATCTCTACAACCAAATTGTGGCCACAAGTGTACATTGCTTTGCCATCCTGGCCCATGTCCGCCTTGTGCTCAATATGCCAATACTTCGTGCAAATGTGGAAAATCTGCACCAAAGTCTGTGCGGTGCATAGATAAACAGTGGGAGTGTGAAAGAAAGTGTGGACAACTTCTAAAATGTGGTCAACATGTATGTGGTCAAATTTGCCATAAGCCTGGCCAATGTCCGCCTTGTAAGAAAACCAGTGAACAGTCATGTGAATGTGGCCGAGAGTCAATGAAACGGCAATGCTGTGACTTGGAATGGcattgcaaaaatgtttgcaatcgAAGTTATTCATGTAATTTGCATGTTTGCAAAAAGATATGCCATGCTGGAGAATGCGGGGAATGCCCATTGAGTCAGCCAAGATCATGTCCTTGTGGAAAAACTaaaaaaatagGACCCTGCACAGAATCCATTGATACGTGTGGCGATACTTGTCAAAAATTACTACCCTGCCAGCTACACACCTGCACACAAAGGTGTCACAAAGGAAATTGTAATTTGTGTCTTGTCATCATTAAGAAGAAATGTCGTTGCGGAATGCATGAAAAGGAACTACCATGTTCCAAAGAATTCACTTGTGAGACCAAATGCAAACAAACCAAAGACTGTGAAAAGCATCCCTGCAATCGCAAGTGTTGCGATAAAAACTGCCCTCCTTGTGATAAAGTATGCGGCAAACCACTGTCCTGTGGCAAGCACAAATGCCAATCTATATGCCATAAGGGACCTTGTTATCCCTGCCAGCAGCAATCACAAATTCATTGCAGATGtggcaaaacaaagaaaatagtGCCATGTGGAAGAGAGCGCACAGCTAGGGTGGTATGCTTGGAGCCTTGCAGAATTCCTTCGAAATGTCACCACTACAACAAGCATCGTTGCCACAAAAATGAATGTCCTCCCTGCTCGCAGCCTTGTGGTTTGCTTAATGATGTATCCAATTGTGGCCACATATGCAATGTTAAATGTCATGCCGCTATAAAGACAGCAAAGAAGGCCAACAAGAACACCGCTAGTGTTTGGGAGCCCAAAAAACAGTTTGAATTTAAATCTATGCCTCATCCAAGATGTGAACAAAAAGTCATGGTAACTTGCATTGGGGGCCATGAAATTGCCGAGTGGCCTTGTTGGAATTCCAAACCAAGTTCCTGCCAACGTTTATGCAATCGCCAATTGAAATGCGGCAATCACAAGTGTCACCTAGTGTGTCATGGTGTTGCCGACTTGAAGGATATGAAACAACAAGAAAATTGTGATGCTTGTAATCGTGGCTGTGATATAGCTCGTCCAGAGGGTTGTACCCATCATTGTCCTCGACCATGTCATTTGCCACCTTGCAATCCTTGTAGTGTGGCTATAAAAACCAAATGTCATTGCGGCCTTATGCCAGTAGTCTACAAATGCAGTGATTATTTTTGCAACGAGGCCAGTGAAAACGACTTGGCAGAAATacaggaaaatttaaaaagctGTGGAAATCGTTGCTTGAAGAATtaTCCCTGTGGTCATCGTTGTGCTGCCAAATGCCATTCTGGACCTTGCCCTTATCCAGATGCTTGCCGCAAAAAGCTACGCATATTTTGCGATTGCAAACGTTTGAAGTTGGAGATCTCCTGCGACAAACATCGCTCGGGTCTAACGAAATTGGAGTGCGATGAAAATTGTGTCGAAACCAAAAAATCTCTGGAATTGGCTCGCAAACAAGAGGAGGAACTTTTGAAAAAACAAGAAGAGGAACGCAATCGTCTAGAGGTTGAGCAATTCGAAAAGAAATTTAGTAAACGTAAACCGAAGGAGCGCAAAACCGTTGAGGTAAAAGCCAAAGAACCTATAAATTGGAAACTTATTGGAGTATATGCCGGTATATTAGCAACCATAGCATTAGCGGTTACCTTTGCATTATACGAAGACCATTAG
- Protein Sequence
- MAPPKNKSQPQSSNASQKFNEIHAKNIDVAKKMVENYESSSEEEELDEKTILDSLYKHYDKRKVDDHLLAKTSSFLENVLHSGAATCLICIGSIKRAEAIWSCKHCYCFFHLNCIRRWANDSLAQIKAQSQNDQQGYYNHLGEYIPPKKIKSLHWCCPQCRKEFLTEDRPSKYECFCGKEENPPSQPWLVPHSCGEICGKSLQPNCGHKCTLLCHPGPCPPCAQYANTSCKCGKSAPKSVRCIDKQWECERKCGQLLKCGQHVCGQICHKPGQCPPCKKTSEQSCECGRESMKRQCCDLEWHCKNVCNRSYSCNLHVCKKICHAGECGECPLSQPRSCPCGKTKKIGPCTESIDTCGDTCQKLLPCQLHTCTQRCHKGNCNLCLVIIKKKCRCGMHEKELPCSKEFTCETKCKQTKDCEKHPCNRKCCDKNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQQSQIHCRCGKTKKIVPCGRERTARVVCLEPCRIPSKCHHYNKHRCHKNECPPCSQPCGLLNDVSNCGHICNVKCHAAIKTAKKANKNTASVWEPKKQFEFKSMPHPRCEQKVMVTCIGGHEIAEWPCWNSKPSSCQRLCNRQLKCGNHKCHLVCHGVADLKDMKQQENCDACNRGCDIARPEGCTHHCPRPCHLPPCNPCSVAIKTKCHCGLMPVVYKCSDYFCNEASENDLAEIQENLKSCGNRCLKNYPCGHRCAAKCHSGPCPYPDACRKKLRIFCDCKRLKLEISCDKHRSGLTKLECDENCVETKKSLELARKQEEELLKKQEEERNRLEVEQFEKKFSKRKPKERKTVEVKAKEPINWKLIGVYAGILATIALAVTFALYEDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00817098;
- 90% Identity
- -
- 80% Identity
- -