Basic Information

Insect: Stomoxys calcitrans
Gene Symbol: zfh1
Assembly: GCA_001015335.1
Location: NW:32075-126356[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2 94 3.4 0.0 2 23 85 107 84 107 0.92

2 9 0.038 1.8 8.9 3.5 1 23 342 364 342 364 0.98

3 9 5.5e-05 0.0025 17.8 1.7 2 23 380 401 379 401 0.97

4 9 1.5e-05 0.00071 19.5 6.4 1 23 410 432 410 432 0.99

5 9 0.00045 0.021 14.9 1.2 3 21 440 458 438 459 0.94

6 9 0.0013 0.059 13.5 0.7 2 21 786 805 785 806 0.92

7 9 3.5e-05 0.0016 18.4 0.5 1 23 1236 1258 1236 1258 0.94

8 9 7.5e-05 0.0035 17.4 7.4 1 23 1264 1286 1264 1286 0.98

9 9 0.0038 0.17 12.0 4.3 1 21 1292 1312 1292 1313 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2	94	3.4	0.0	2	23	85	107	84	107	0.92
2	9	0.038	1.8	8.9	3.5	1	23	342	364	342	364	0.98
3	9	5.5e-05	0.0025	17.8	1.7	2	23	380	401	379	401	0.97
4	9	1.5e-05	0.00071	19.5	6.4	1	23	410	432	410	432	0.99
5	9	0.00045	0.021	14.9	1.2	3	21	440	458	438	459	0.94
6	9	0.0013	0.059	13.5	0.7	2	21	786	805	785	806	0.92
7	9	3.5e-05	0.0016	18.4	0.5	1	23	1236	1258	1236	1258	0.94
8	9	7.5e-05	0.0035	17.4	7.4	1	23	1264	1286	1264	1286	0.98
9	9	0.0038	0.17	12.0	4.3	1	21	1292	1312	1292	1313	0.96

Sequence Information

Coding Sequence: ATGTTGTCGTGTTTGGTGCCGTCGTCAACATCACGTTTTGGTCAAGAGGATAATATTATCAATCAAAGTATGCCCTCATCGCCAGCATTCACCATGCAATTTCCTTCATTGGCCTCTACATTgcatcaccatcatcagcaGTCAAAGAGCAGTAGTGGCAGTAACACAGTTGATGATGAAAATTCTAGTGGCGTACCAGCTTCATCGTTGGGAGCTGCCTCACCCACTCCTCAACAAACTGACTTTATGGTCACATGTCCTCAATGTCAAATAAGATTGGGGGGTTTCGAGTCTCTCCGTGATCACATTGCCAATGAGCATCCTCACGATAAATTAAACATTGAACCCTCCTATCCCAGTCCGCCAGCTGAACATTTGCATCAGGGGCAAAATCTAGCCTCAAATACCACAAATATGATTGGTGATCCTGCCAACACTAATGTGGATGACAGTGATGACAACGAAAGTAATCAAAGTTCAAGTGaatcgaaaatttttaataacaataacaacaatagccAAGAGAAGAATAACAATAGTATTAATGCCACACCTACACATAATTCATCTGCCCCCAATACACCACCACCCTCCTCGCAACAACATATatccaacagcaacaacaacaatggtctCAACTCCTCCAATTCGCTGGTGGGAGATCTCTCCACATCACCATTTGCTGCACACTTACCGCATAATATACATCCTGCGGCCGCGGCACAATTCATGGCTGCCTTGGCcatgcagcagcaacaacaacaacaacagcagcagcagcaacaaaatgCTGGCAATACCTCACCCACATCCCATTTATTAGGAGGATTCAATGGCCATACCCAACATcagcatcatcaccatcatcatcatctaaaTCCACATGCACTCTCCTCCGCACAGCAACATTCTTCGAATCAACATCATTCGTATGATACCATGGATACCATACGCTCCACCTCAAGTCCTGGCTCATGTGGAGGCAGTGATAATAATTCAGCGGCCAGCAGCATAAGTCCACCGTATCAGTGCTTGCATTGTACTGCATTGTTTCAAACACGTCACGAATTGGAGAAACATGAACTTATGCATTCACCCAATGCGCAGTCGCCACAGTCCCTAAATGGTGTTAATCAAAGCTGCAAAATCTGTCACAAGGCTTTCGCCAATGTCTACCGTCTGCAACGTCACATGATCAGTCATGATGAGTCGGCACTACTACGCAAATTCAAGTGTAATCAATGTGATAAGGCTTTCAAATTCAAGCATCACCTCAAGGAGCATGTGCGCATACATTCCGGCGAAAAGCCATTTGGTTGTGATAATTGTGGCAAGAGATTTTCGCATTCCGGTTCCTTTTCATCGCACATGACTTCGAAGAAATGCATAAGCATGGGCCTGAAATTGAACAACAATCGTAATCTGCTGCTCAAGAGTTTGGACAAGAATATAACTGCATCGGCCAATACTTCACCCACAGCCTCTCTGAAACTGGGCTCACCCAATGGCAAGACGGCAGTGGATGCCCAAAGCATGGTGCAGAGTCTAACCAATACCATGAATTACTTTGCGGCCGATAATAATGCCAATGCTGCACAAGCTTCAAATCCATTCTATTCAAATTTACTGCCCAAATATGGTGACTACAATAGTGCCATGAATGCCGCCCTATTGGCCTCATTTCCAAATCCATTCTATAGCATGGCTTTGGATCCCCGTATGCATCCGTATAGTATACAACGTCTATTGGAGTTGACTGCTGCCggccagcagcaacaacagcaaacagCTCTGACGCCCCCACCTTTGCATCACCAGGTGGGGGAGGCAGATGTGGCAGCGGCGGAGGATGAAGATGATAATAGCAAGGATTTGAAAATAGCCTCCAATGTAGATGAGGAGGATGAAGATAACACCTCAGAGACATTGGAATTAAATGATGAGGATAATCAAGATGAACCAAAACTGGTTATGGATTTGGAGGCCGAGCCAACGAACAAAGAAACAGAAACAAATCACACCACCACTCACTCTACGGAGATGAATGAAAAGCCGAAGGGAAATgaggaaaaagaaaatgaaatgccTCCAGAGGAGGAAGAAATTACCACCAATGGTAATGCCCCTAACAATTCCAGTCTcattaaacaagaaaaaatcccAAGTGAAACACCTACCGACAAAGAAGCCATCGAGCAACAGGCAATGCAAGAATCGCACTTACCTGAACCCCTTGTTCAACATCACATTAAGCAGGAGCAATTCGAGGAATCCCAAGAACCCTTGGAAATGTCCACCAATGAGGAGAAATCTTCGGAGGACTTGCCAGATTCAGTCAACTCTTCTTCCGAACTGAGATGTTCGCGTTGCgataaaaaattcaatcatCCCACAGAGTTGGTGCAACATGAAAAGGTGCTGTGCGGTTTCATTAAACAGGAATTGGAGCAACAATACCATGCACAGCagcaacagttgttggaacaatCGGCCAGTTCCAGTTCATTTATGGCCAGCAGTGATGTTGAAGATGAACGCGATGAGGAGCAAGAGCGAGATTCTCTTTCACGCAATGATTGCTCCAGTGGTGGCGAATCTAATGCCGAACGTAAGGTGCGGGTGCGCACCGCCATTACGGAGGAACAACAACAGCACCTGAAGCAACACTATGCCATTAATTCTCGCCCTAGCCGTGAGGAGTTTCGCATGATTGCCTCACGCCTGCAGCTTGATGCTCGTGTGGTGCAGGTGTGGTTCCAAAACAATCGTTCTCGGGAACGTAAATTGCAATATAACAAcatgaacaacaacaaattgacATTCCCCATGCAGCTGCCAAGTGGAGGAGTAGTAGCTGCCTCAGTTCCAGCAGCGAGTGCGAGCACACAAAACTTTGAAGGCAATGCCCCAGAGACGATGAGTAAGCCTTTAACACTGTCCGAAGAGCTGCCTTTGGATTTGTCCGTTAAGCCACAGGTAAAGCCTCATGGTCAGCAACAACATTCACCCATGTATGGCATAGCCCCGCTACAATCGGGAGCCAATGGCAACAATATTAACGGTGATCTGCAAGAGGCCATTAATTTAAGCCGCAAAATGTCACCGCCCTCCTCATCCTTGTCACCCACATCGGCGGCCTCGGTGCCCGCTGTTTTCAAGCAGCAGGCTCAAGCGCAGGCGGCTGCCGCTGCAGCAGCTCTATACTTTGCTGCTCCTCCCTCACAGGCCAGTGGGGCTCCAAATTTGCCCCACAACATGCGTCAGACACCCTCACCCATAGAAGCTCCCCTGGGTTtgggtgatggtggtggtcctCAACAGACCTCAACACCACGTGGCGCTGCAGCATTTCCCTCCTTCTCACAATTGCCACCGTACATGATGCCCGCGGCCATGGCCGCTGCTCAACGCACTTTAATGCCCATGGAAGCCTTATTCCAAATGACACCTAGTTCGGCGGAATACGCCCGCCAGCAACATTCGATAATGAACAGTATTAAAATGGGTGCCTCCGGCTTGGACTTTAGAGGCAATAGCTTGAGTCCCGGCTCAGAGAAACGTTCATGGCGTGACGATGACTCACGCATATCGCATGAAGATGAATACGCCCATGCGCAGGCGCAGGCGGCTGCCGCCCTAATGCCACCCAAACCAAAGAGGGCCAAGGCTGAGACGCATGGTCATGCTGGTGATCCCGATTTGCCTTTCATTTGTGATCAGTGTGATAAAGCTTTTGCTAAACAAAGCTCGCTGGCGAGACATAAATATGAGCATTCCGGTCAACGTCCCTACCAATGTATGGATTGTCCCAAAGCTTTCAAACACAAACACCATTTAACCGAACACAAACGTTTGCATAGTGGCGAAAAGCCCTTCCAATGTTCCAAGTGCCTAAAACGCTTCTCACATTCCGGCTCGTACTCGCAGCACATGAACCACCGGTACTCTTACTGCAAACCCTACAGGGAATAG
Protein Sequence: MLSCLVPSSTSRFGQEDNIINQSMPSSPAFTMQFPSLASTLHHHHQQSKSSSGSNTVDDENSSGVPASSLGAASPTPQQTDFMVTCPQCQIRLGGFESLRDHIANEHPHDKLNIEPSYPSPPAEHLHQGQNLASNTTNMIGDPANTNVDDSDDNESNQSSSESKIFNNNNNNSQEKNNNSINATPTHNSSAPNTPPPSSQQHISNSNNNNGLNSSNSLVGDLSTSPFAAHLPHNIHPAAAAQFMAALAMQQQQQQQQQQQQQNAGNTSPTSHLLGGFNGHTQHQHHHHHHHLNPHALSSAQQHSSNQHHSYDTMDTIRSTSSPGSCGGSDNNSAASSISPPYQCLHCTALFQTRHELEKHELMHSPNAQSPQSLNGVNQSCKICHKAFANVYRLQRHMISHDESALLRKFKCNQCDKAFKFKHHLKEHVRIHSGEKPFGCDNCGKRFSHSGSFSSHMTSKKCISMGLKLNNNRNLLLKSLDKNITASANTSPTASLKLGSPNGKTAVDAQSMVQSLTNTMNYFAADNNANAAQASNPFYSNLLPKYGDYNSAMNAALLASFPNPFYSMALDPRMHPYSIQRLLELTAAGQQQQQQTALTPPPLHHQVGEADVAAAEDEDDNSKDLKIASNVDEEDEDNTSETLELNDEDNQDEPKLVMDLEAEPTNKETETNHTTTHSTEMNEKPKGNEEKENEMPPEEEEITTNGNAPNNSSLIKQEKIPSETPTDKEAIEQQAMQESHLPEPLVQHHIKQEQFEESQEPLEMSTNEEKSSEDLPDSVNSSSELRCSRCDKKFNHPTELVQHEKVLCGFIKQELEQQYHAQQQQLLEQSASSSSFMASSDVEDERDEEQERDSLSRNDCSSGGESNAERKVRVRTAITEEQQQHLKQHYAINSRPSREEFRMIASRLQLDARVVQVWFQNNRSRERKLQYNNMNNNKLTFPMQLPSGGVVAASVPAASASTQNFEGNAPETMSKPLTLSEELPLDLSVKPQVKPHGQQQHSPMYGIAPLQSGANGNNINGDLQEAINLSRKMSPPSSSLSPTSAASVPAVFKQQAQAQAAAAAAALYFAAPPSQASGAPNLPHNMRQTPSPIEAPLGLGDGGGPQQTSTPRGAAAFPSFSQLPPYMMPAAMAAAQRTLMPMEALFQMTPSSAEYARQQHSIMNSIKMGASGLDFRGNSLSPGSEKRSWRDDDSRISHEDEYAHAQAQAAAALMPPKPKRAKAETHGHAGDPDLPFICDQCDKAFAKQSSLARHKYEHSGQRPYQCMDCPKAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01374862;
90% Identity: iTF_01374862;
80% Identity: iTF_01374862;