Basic Information

Insect: Stomoxys calcitrans
Gene Symbol: RREB1
Assembly: GCA_001015335.1
Location: NW:119506-137785[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0015 0.071 13.2 0.9 1 21 240 260 240 262 0.96

2 12 0.00038 0.018 15.2 0.2 1 23 272 294 272 294 0.98

3 12 2.7e-05 0.0012 18.8 7.5 1 23 300 322 300 322 0.98

4 12 0.043 2 8.7 2.4 2 19 562 579 562 579 0.97

5 12 0.0095 0.44 10.8 0.1 1 23 734 756 734 756 0.97

6 12 2.6e-05 0.0012 18.8 1.3 1 23 766 788 766 788 0.99

7 12 0.00094 0.043 13.9 2.0 1 23 794 817 794 817 0.97

8 12 0.0034 0.16 12.2 2.0 1 23 1158 1181 1158 1181 0.95

9 12 9.8e-05 0.0045 17.0 0.3 2 23 1529 1550 1528 1550 0.97

10 12 0.16 7.6 6.9 6.3 1 23 1556 1579 1556 1579 0.97

11 12 0.0096 0.44 10.7 0.5 3 23 1758 1778 1756 1778 0.96

12 12 0.0016 0.073 13.2 4.8 1 23 1784 1806 1784 1806 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0015	0.071	13.2	0.9	1	21	240	260	240	262	0.96
2	12	0.00038	0.018	15.2	0.2	1	23	272	294	272	294	0.98
3	12	2.7e-05	0.0012	18.8	7.5	1	23	300	322	300	322	0.98
4	12	0.043	2	8.7	2.4	2	19	562	579	562	579	0.97
5	12	0.0095	0.44	10.8	0.1	1	23	734	756	734	756	0.97
6	12	2.6e-05	0.0012	18.8	1.3	1	23	766	788	766	788	0.99
7	12	0.00094	0.043	13.9	2.0	1	23	794	817	794	817	0.97
8	12	0.0034	0.16	12.2	2.0	1	23	1158	1181	1158	1181	0.95
9	12	9.8e-05	0.0045	17.0	0.3	2	23	1529	1550	1528	1550	0.97
10	12	0.16	7.6	6.9	6.3	1	23	1556	1579	1556	1579	0.97
11	12	0.0096	0.44	10.7	0.5	3	23	1758	1778	1756	1778	0.96
12	12	0.0016	0.073	13.2	4.8	1	23	1784	1806	1784	1806	0.99

Sequence Information

Coding Sequence: ATGttggccacacacacacacaataacaGCCCAGATGATGGGCCTGTGCATAACATCGTCACCGCTACAATCGCCACCCCCATTAAAATGGAGAGACGTGATTCAGCCACATCCGAATCATCGTTGGAGCATTTGGATTTGGGTCGCACACCGAAAAAATTGAGTGCAGCCACCTCTACCCCAGTTGTGACCAATGATAAAACACGGAATGCCGCTGCTGGTGCCTTAGTTGAGCCGAGTAACACAGAtaacgaaagatatttgcagCATCATCGCAATAAAATGCAACAGGATTCCGATGAGGCCAATGACTACGATGATGAAGAGTCGGCCGATGAGAAGAGCATTACAGCTCCACGCCAACAAATGCAGCACAAGCGTCGCCTGACTTCTCGCAATTTCATGGACAAACATACCAGCGTACACATAGAATATAACGCGGACAATCCCAATTCGCTGCGTAAGAAATTCCGTTTCAATCGTAGTTCCATAGATCATGGTAACGAGTCTGGTTTCGTTGATGCCAGCAGCAGTCAGTTGTTGAGTTCAAGCCCAGTGACAGCTACTACCGTAGTCCTTGAAAATATTGGCCCTAACAATGGTGACAATAATGGTGGTTCTAAATCGAATAGTTCATCGGCCGCCTCCACACCGCCTCATCAGCAAAGCAATGGTAGCAATTCAAGCGCCGACTCAGCAACGGGCGAGGATATGAAATATGTTTGCCCAATTTGTGATGTGGTTTCGGCCACACCGCATCAATTTACAAATCACATTCGCTGCCACAATTATACCTCAGGGAATACGGAGAATTTCACCTGCCGTATTTGCTCAAAGGTACTGTCATCTGCATCTTCGCTGGATCGCCACGTTCTAGTTCACACTGGGGAAAGACCATTCAATTGTAAATATTGTCATCTCACTTTtacaacaaatggcaacatGCATCGCCACATGCGCACCCACAAACAGCATCAGCACACACATCATCGGCGCAACTCAAATGGAACAAAGTTCAACTCGAACACCACGGCGGCGGCGGCGAAAGCGGCAATTGGGGGTTGCCCAACGCCATTAAGCCATAGTGGACAATTAAGTGAAGGCGTTAAATTATCAGCAGTGGTAGCGGCTTCGCCTACAGCCAACGAGGCAGAGCTCAACAGCCATGGTGTGTTGGCATCTGCTGCAgcaaacaacaaccacaacataGGCGGCAGCAGTAACACGACAGGTGCTAATGACAAGCGATTAAGTGTTAACGCTGAAGCCACATCAGCTCGAGAAAGTTATGAAAGTGATGGTGAGTGCTGCTCTTCGGATAATTCAATGGctcacaacaacaataacaatgacTTGAAAATTAACAATAATAACTATAAACGTAAGTTAAGTGGTGGTggcgatgatgttgatgatgatctCCTTAGGCAACACCAACTACAACAACGCAATCAAAACTCTGAAGAGTTGTTTAAGCAACAATTAAAAGCAATTGTTAACAACAAATCCACCAACGTCGCCAACTCCAATACATCCCCCCGTAACAGCCGCGAGGAAGATGGCAAATCGGCTCAAGCTTCCAGCAATGAGCCCTTAATCTGTCCCGTCTGTAATGATGATGAATTTTCTGATGTTATGGCCCTGGATCAGCATATGGATGCCAAACACCCAGAAATTCCAGCCAAGTGTACCCATTGCGGCGTTATTTTCCGTTCTCATCATCAGCTCAGCATACATCCCTGTTCGGCTGATGATGTGAAACCTCAGGTTGTTGTTGACCACCCTAGCACTCCGAGACAGCGGAAGTTAAGTGAACACTCTGTGGGACATTCTCCGCAAGATCATTCTCCAGATGACCATGAGCATAATGCGGACCAACGAAGACGCCAAGAATTATTCCAACACGTGGAATTGAAAAATATGATGAGCCGAACCCACACGCCTTCCTCCTCTTATCATAATTTAGATCTTGCCGAAGACGATATTAAATCGGAACCTTCTGCCGGCCATGATTCTAAAGATTTAGCTGATATCCAGTCGATACTTAATATGACCTCGTCGTCGAGTACTTCGAATTTcctcaaaaattttgaacaatctGTGAATACGCCATCATCACAATTCAGTTACGACCGTGATGAAGAAGAGGCCCAAGATGTTTTCACGGCCGAATTTCGTAAAATGAAATTGCGCGGCGAGTTCCCCTGCAAGTTATGTACAGCGGTTTTTCCTAATCTCAGGGCCCTCAAGGGCCATAACCGAGTACACCTTAGTGAGGTAGGCCCTGCGGGTCCCTTCCGCTGCAATATGTGCCCATATACGATTTGTGACAAGGCGGCCCTGGTACGCCATATGCGTACACACAATGGCGATAGACCGTATGAATGTGCCGTCTGTAATTATGCCTTTACAACCAAAGCCAACTGTGAACGCCATTTGCGCAATCGCCACGCCAAAACAACTCGAGATGAAGTTAAACGTGCCATTATCTATCATCCTTCTGAGGATTCGAGTTGTGATGATCCTACTAAAAAGCAACATCTCTTCTCCTCACCTGATATCGAAGACGATATTGAATTCTATCAACAGCCCGGTCGAAGAGACAGCTCCACGCCTGTTTCTCATCTCAAAGAAATGCTGACATCGGGGACTGATAATCATGCCTCCCCCAAACCGGCAAAAATCCAAGTGAAGAACCTAAATGAAATGTTGGACAAATCCACATCTTCCTCAGGTTACAACGATAGTTACGATAAACAACTGAGTGAAAAATCTGCAACTGTTGCCATTGATATGAGTATGGACGTTTTAGATCTGAGCAAAAAGCCTACAGGCCGAACAAACGCACAGAAACCCAATGAAACAAACGATGAAATGCCTCATCCTCTAATGCAAAAGGAAGAGAACATATCCATTGGCCCTTTGATGCCCAGTAGTGTCGATGAGGCATCAACACtggaaaagcaacaacaattgctTATGGGTCAACAGCCGTGGCTCAACGATACGGCCCAATACCTacagcaactatatcgaaatttacTATTTCCACAACTCAATCCCTTCCTAATGCCTAATTCTCCATTTATGCCTCAAAATATGGCTGATTTTCAGAAATTGGCTCCATTCTTTAGAACTATGTTGGGCACTACTGCGGGGACGACATTACCGCCTTCAGCCGATTTGGATAAGGCCACATCTTCTGCACCACCTACAGCAAATTTACCTCCTATTAGTCCCATGATGACGGAAAAGTCTAGTTCGGTCTCAATGGCCTCGCCGAAGGCTGGATTACTCTCTCCCAACCCGAGTCATCTCAGCATACCCAGACATGTTGTGAATGGCTCATTGTCCACACAAACTCCACATTTGCCACCTACCATTTTATCCAACGGGCCGGTTaaaatggttttaaaaaatGGCGTGTTTATGCCTAAACAAAAGCAAAGGCGTTATCGCACCGAACGTCCCTTCGCCTGCGAACATTGCTCTGCCCGCTTTACCCTGCGATCAAACATGGAACGCCACGTGAAGCAACAACATCCCCAATATTATGCTCAACGTCAGCGTAGTGGTCATCATGTAATGCGTGGCCGCGGAGCCAGCAATGCTGCCAATATAAATAACATAACCCGCCTACAGGCTGCCGTTGCCCACGCGCATTATGGTGGTAATCCAAATTCATCAATTACCAGCCACTCCCCTATTTCGGATCAGGTCAAATATGCAATCTTGGCCCAACAACTCAAAGCTCGGAAGGATCCGGATCTTCTGCAACAAGCTTTAGTACATGGTTCAAATAGTGTTGccaattcaaatttattttcaaatcatTTGAGTGCTCATAACAATGGTGGAGCTGCGGTGCCACATGCCTTTCCCAACTATTCCAGTCAtcaacaacatcagcaacagcaCTTGAGTCAAAATGGCACCCCTAACGGTTCCATGGAGGACGATGAGCCCAAACTAGTAAtcgatgaagatgatgatgatgaagaatgCGATGAGGAGGATGAAGATGAGGTGGGAGAAAttcatgatgatgacgatgactatCCCGACCATGACATCCAACTGATGGAGAAGGACGCTGACCCCGCGGAGGAACACCAGTTACCCACCACGGTGGAAGAGGTTAAACTTAAGCccgaagaaaaaaaagaagctgCCAAAAAGATGGCAGAGTCTATATTGGAACAGGCCATTAAGGCTGGCCAAAATATGCCAACCAAAACAGAAGTACCTGCTACTGTGAATTCCAACAACACCATGAAATCCATGATTGCTCAAGCTCCAGCTGTGGGAAAATTTCTGAAAGAGGTGGCCAGTTCCCCATTCAAAGATGAATCTCAAGACCTGGTGCCCGTAGCAAAGTTAGTAGACAATGCTACCAGCAACTCAGTGTCATTCAACAGCTATTTTCGCCCTGGAGATGTGGCCAATCACATGGATCACAGTGATGAGGAGGGTTTAGTGGCCTCCGGCAGTGCCAGTGAAAGCAATAATTCAGGCGCTGAAGATGCTGCCACCAGTGCTCAAACCAAGAAGAAGTCAGCCTATAGCTTGGCTCCAAATCGTGTATCCTGTCCATATTGCCAACGCATGTTTCCTTGGTCTAGTTCCCTTCGACGACATATTTTGACACATACCGGACAGAAACCTTTTAAATGTTCTCATTGCCCTTTGCTTTTTACAACAAAGAGCAACTGTGATCGCCATCTATTGCGCAAACATGGCAATGTGGAGTCTGCAGTCTCCGTCTATGTACCCGATGAGGATGTCAACGAACCCATACCCTTGCCCAAGTCCGTTGAAGAAATCGAAAGAGAAAAGGAACGTGAAGAGGAAGAAAAGCGACGTTTGGCCGAAGAACAAAGAGAACGCCTGGAGCGAGAGCAACGAGAAAAGGAGAAACTTGAGCAAGAGCGTCAGCAGCAACAGCGCCAGGCTATTCGCAAGCTGGCGGAAGTACAATTTAACCAGTTCCAACTGAAGACCGAGGCGGCACCAGCTTCGGCAATTTCCTCTTCTGAATTGCCTTATAAATGCCATTTATGCGAGAGTTCCTTTGCTGAGAGAGCTCAATGTCTGGATCACATCAAATGTTTTCACACTCAGGAATATGATTTGTTATTGTCCAAAGGCGCCATAGATAGTGAGGTCGAAGCGAACCAAATCAATTCCAATGAGGAAGAGGAGCGCAATCGAACCCAAGAGGAGGCAACAAAGGGAGTAAAATATCCAGATTATAGCAATCGCAAAGTTATATGCGCATTTTGTGTGCGACGTTTCTGGTCCACCGAAGATCTACGACGCCATATGCGTACCCATTCGGGGGAGAGGCCATTTCAGTGTGACATTTGCCTGCGCAAATTCACATTGAAGCACAGCATGCTGCGCCACATGAAGAAGCACAATGGTCTTCATGGCAATGGCTCGTTGCACGGAGTTGATGGTCTGCATAATGGCAATAGCTGCTCAGACTACTCAGATGACGAACAAGGACCATTGCCGGCTGCACCAGCAGCACCACCTGCGAATTTTAATGCCCTCTTGTTGGGTACCATGGGCTCCAAAATACAGGAATTGCTAAGCAAGGCCAACGAGTGGGGCAATGGAGCTGGCCTCTCAGTGCTGAGGGAGCGTAAGCAGAATATTAACGACGATTCGGCTATGGTACAATCGGATCTAATTGGCAATCTCTTGGGCATCAGTGATCAGGGCATACTCAATAAATTGATGTCATCGCCAGATGAGGCAGCCAAGCTGTTGGGAGTTGAAAAGTAA
Protein Sequence: MLATHTHNNSPDDGPVHNIVTATIATPIKMERRDSATSESSLEHLDLGRTPKKLSAATSTPVVTNDKTRNAAAGALVEPSNTDNERYLQHHRNKMQQDSDEANDYDDEESADEKSITAPRQQMQHKRRLTSRNFMDKHTSVHIEYNADNPNSLRKKFRFNRSSIDHGNESGFVDASSSQLLSSSPVTATTVVLENIGPNNGDNNGGSKSNSSSAASTPPHQQSNGSNSSADSATGEDMKYVCPICDVVSATPHQFTNHIRCHNYTSGNTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFNSNTTAAAAKAAIGGCPTPLSHSGQLSEGVKLSAVVAASPTANEAELNSHGVLASAAANNNHNIGGSSNTTGANDKRLSVNAEATSARESYESDGECCSSDNSMAHNNNNNDLKINNNNYKRKLSGGGDDVDDDLLRQHQLQQRNQNSEELFKQQLKAIVNNKSTNVANSNTSPRNSREEDGKSAQASSNEPLICPVCNDDEFSDVMALDQHMDAKHPEIPAKCTHCGVIFRSHHQLSIHPCSADDVKPQVVVDHPSTPRQRKLSEHSVGHSPQDHSPDDHEHNADQRRRQELFQHVELKNMMSRTHTPSSSYHNLDLAEDDIKSEPSAGHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSQFSYDRDEEEAQDVFTAEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSEVGPAGPFRCNMCPYTICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCDDPTKKQHLFSSPDIEDDIEFYQQPGRRDSSTPVSHLKEMLTSGTDNHASPKPAKIQVKNLNEMLDKSTSSSGYNDSYDKQLSEKSATVAIDMSMDVLDLSKKPTGRTNAQKPNETNDEMPHPLMQKEENISIGPLMPSSVDEASTLEKQQQLLMGQQPWLNDTAQYLQQLYRNLLFPQLNPFLMPNSPFMPQNMADFQKLAPFFRTMLGTTAGTTLPPSADLDKATSSAPPTANLPPISPMMTEKSSSVSMASPKAGLLSPNPSHLSIPRHVVNGSLSTQTPHLPPTILSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRQRSGHHVMRGRGASNAANINNITRLQAAVAHAHYGGNPNSSITSHSPISDQVKYAILAQQLKARKDPDLLQQALVHGSNSVANSNLFSNHLSAHNNGGAAVPHAFPNYSSHQQHQQQHLSQNGTPNGSMEDDEPKLVIDEDDDDEECDEEDEDEVGEIHDDDDDYPDHDIQLMEKDADPAEEHQLPTTVEEVKLKPEEKKEAAKKMAESILEQAIKAGQNMPTKTEVPATVNSNNTMKSMIAQAPAVGKFLKEVASSPFKDESQDLVPVAKLVDNATSNSVSFNSYFRPGDVANHMDHSDEEGLVASGSASESNNSGAEDAATSAQTKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSVYVPDEDVNEPIPLPKSVEEIEREKEREEEEKRRLAEEQRERLEREQREKEKLEQERQQQQRQAIRKLAEVQFNQFQLKTEAAPASAISSSELPYKCHLCESSFAERAQCLDHIKCFHTQEYDLLLSKGAIDSEVEANQINSNEEEERNRTQEEATKGVKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHNGLHGNGSLHGVDGLHNGNSCSDYSDDEQGPLPAAPAAPPANFNALLLGTMGSKIQELLSKANEWGNGAGLSVLRERKQNINDDSAMVQSDLIGNLLGISDQGILNKLMSSPDEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -