Basic Information

Insect: Stomoxys calcitrans
Gene Symbol: -
Assembly: GCA_001015335.1
Location: NW:78340-95205[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0023 0.11 12.7 0.3 1 22 991 1012 991 1015 0.90

2 8 1.5e-05 0.00071 19.5 0.7 1 23 1414 1437 1414 1437 0.98

3 8 0.00012 0.0054 16.8 1.8 2 23 1461 1482 1461 1482 0.97

4 8 1.5e-05 0.00069 19.6 3.5 1 23 1488 1510 1488 1510 0.98

5 8 1.1e-05 0.00052 20.0 0.2 1 23 1516 1538 1516 1538 0.98

6 8 0.0036 0.17 12.1 2.7 1 23 1544 1566 1544 1566 0.98

7 8 0.0003 0.014 15.5 0.1 3 23 1574 1594 1573 1594 0.97

8 8 0.00092 0.042 13.9 2.4 1 23 1600 1623 1600 1623 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0023	0.11	12.7	0.3	1	22	991	1012	991	1015	0.90
2	8	1.5e-05	0.00071	19.5	0.7	1	23	1414	1437	1414	1437	0.98
3	8	0.00012	0.0054	16.8	1.8	2	23	1461	1482	1461	1482	0.97
4	8	1.5e-05	0.00069	19.6	3.5	1	23	1488	1510	1488	1510	0.98
5	8	1.1e-05	0.00052	20.0	0.2	1	23	1516	1538	1516	1538	0.98
6	8	0.0036	0.17	12.1	2.7	1	23	1544	1566	1544	1566	0.98
7	8	0.0003	0.014	15.5	0.1	3	23	1574	1594	1573	1594	0.97
8	8	0.00092	0.042	13.9	2.4	1	23	1600	1623	1600	1623	0.97

Sequence Information

Coding Sequence: ATGCTGAAGACTCATAGCAATGCCCTTAAAATGAGTAAAAGAACAGCGCTGGATGCCAATAGTCCCCAGGCCATGCTGCATAGGGCTTTGCAACAGCCGCTACTGTTAGCCCCACCACCCACACCCACCAAACAAAAGGAGACCACCGCCATCGCCACCATGCTTCAGCCCCTGCAAAGCTCTTTGAGGGTTGAGGATTTAAATGATCCCAATTCACCCCATTTTCCCGATCATTTGGGTTGTGGCGAAGTTTTCACCTGGCATTGCGAGGGTGAATTCTATGCTGTGGAATGTCGTCTATGCGATGATCATCCCCTATGCCCCCTCTCGGAATTCCCTTTGCACATGGAGGCTTGGCACACTGATTGGACTGGCAAATTGACCATTGATGGCGAGGATATGGATGAGGAGGAGGATGAGGAAGAACAAAATGATTTGTATCATGTTTTGGCTCTGTCGCCCCAAAACAACGAGGATAGCGGCCTTTGTGATTACGATCACGATGATGACGAAAGTGGTGTTGGTGGCCAGCATTTATCGCCTGCTTCGCAGCAAATGTGtgaagaagaagaggaagatGTGCTCGAACCGTTCGAACAAGTTTTGATTGAGCAAGAAAATAACATCGATACCACACAGGTTAATGAAAACGACAATCAAGCAGTTAATGAACGTGCTGCTGATGCTGGTGTTGGTATTAGTGTTAATGAAGTAAAAGCGGCAGGCGCGGAAGAGGAAAGGGAAGTGATGACAGAAGGTGACGAAAATACCTTAACAACAACGGTACTCATAGCATCCGCAGAAACAACGATATCAAGCAACAACGTCTGCGCTGGAGAAACCCCTCCAACAGCACAAactcaagaacaacaacaacaacaacaacaattgtggAATAACAAATCAAAACAATACCATAACACCATACTCTCTGCAGAACTCAAATCTACGTTAAAAGAAGAGAACCACCAAGAGGCCAATACACTGCAGCAAAGAGAAAATGAGAGCTTAACCGTTATAAGAGAGTCTTtatacaatgagttgtgtttctCTGAGAATTCTTTAAGCTGCTGTCACAGCACAGCAGAGCAACTGCAGCCGTCGTCGCAGCCACCACAGCAGCAGCATGCGCAGTTAACACAGGCAACGGTGAAAGAATTAACAAGTGATCATGATGAAACCACTAAAGTTCCAAAGAATTGTTGTTGGCCCGAAGAAAGTTACGACAgcaataaaaaacaagaaattcaaCAATTCCCAAAGCCGACGGAAGCAGGTGAAATTATCGCGCCACAATCGCAACACCCAAAAGACTTCATTAAACCCAAGACAAAACAGCAATCTAAAGACCACATACAATTAGCAACTAATTCCGCGAAGAAAAAATCCGTGGTAGAAATTACCAAAgtggaaattttaaatgtcaataATTCGCTAATGGCGAACAACAACAGTGCAGAGGCCGAGATGTTGGCGCCCAACGTTAAGGACAACTCTCCCATGCCGCCTCGCAAAAGGAAAAGGGCAAACGGCAAATGTTTGAGCCAAGAAATAAACATACAGCCCCATAAATCTAATCCTCCTTTAAGAGGCAAATATTTAAAGTCATTTAAGAAATTTCTGCAAAAATCAGATACCGAAAGTCTGTCAGGTAGTGaaattgttgaaaatgataGCAGCAGTCCCAATAGTTCGCCCCTTCACTGCGCTAGCATGGAACCTAAAAGGCGGCGTTTATATTCCAGAGCCTGTAAGAAATCTCCCACCAATTCCTTGTCAAGTGAAACAAACGAATATCCATCAACTTCACCTTCGCCGCCACCCACAGATTGTGATAGCCACACTTTCCTTTCACCCGCCCATGCCCTCGAACCCGAAGTCCCTGCATCACCACAAAGTGATAAGTCCAGCAAGATACGTTACTTGGTTAAGCAATGCGAGCGCATTGCCCGTGAGCATTCCTCTTCGGCAGCTTCTACCATATCGTCAACCTCCACCTGCTGTTCCAGCAATTCATCCCTAAACCGAGGCAAACGCAATAGCCGAAGGCGTCGATCTCTGACACCGGTAGAAGTTTGCGATATACAACCTACCGTGCCGCTCAACGATCACATACTTCCCATCTATGATGACTCTGGCAATATGTCACCGGAAATGCTGAGCGAGCATTTGGAATCTCTGGCCTGTTCCCTTTTGGACTATGATGATTTTCCCGATGATGATCATTCAGTGGCATCCACAAGTTTGACAGGTGAAAATATCTTAGAATCTTCACCCTCATCACCTGGTTCGCCCAAAACCGAAGAGGAACACTTTGAATTTCATGAGCCTCGAGAGAAACTCAATAAGATGCATGTCCTCAAGCTCATTGAACTTTACCAGGAGCATACCCGCCTGTGGGATCAAACGCATAGGGAATTTTGTGAGCCTCACCTGTGCCGGCAGTCTTGGCAGGACATAGCCGAACGCTGGAATGCCTTCTGCAATCGTAAATTCCACATAACCGAGGTGCGCATAAGAATTTCCACCCTATGCCAGCGTTATCTCAAGGAGCGTGAGCGCATACAAAGAGAAGGTGAGCTGGATGAGAGTGCCAAATTTCCCTATTATGAGCAAATGTCCTTTTTGGAGCAGCATCGTTCTCTGCAAAAACGTCGTGAGGTGTATGAGCAGcaaaatgaaaagattttggAAATCTATCAAAAACATCTGGTGCTGTGGCATGTGCGTTGCTATAAGGTGCGTCAGGTCAAGGAGAGAACTAAAGCATTCCAGAGCATAAGCTCGGAGCTTAAGGATATTGGCATTTATCTCTCCTCCAGTGGGGTGCAGAAACGCATACGCTCTTTGAGGAAATGCTATCGCCTGGAGAAAATTCGCCATCTACATGCCCAGGTGGAGCGCATGAAATTCGAACCCACCTTTAAGCATTACGAGAGAATGCAATTTCTGGACAAACATATTGATCCATTCGTTTGTCGTGTGTGTGGCAAAATCTTTGAAAGTTTAGTTAGCTTTAAGGAACATCTAGAGTCATCTAGTCATGGCAATATACTGGAAGAGGAGGACGAAGATGAAGAGGAACCCAACAAACCGGCTAACACATCGTCCAATGTTACGCAGGATACCATTGTCTGTGGTACCAATGAGAAATTTGAGATAAGCATGAATGTCAAAGATCTCAACTCGGTGTCCGTTTTCATCAAACCATTGGCCATGGAGCAGCAAAGTGCAGTTGGTTGCAATAAAAGTTCACGACGTGATGCCAGCTTCAACCAGTTTCCCATGGAAGATGTTATAATGGAGGAACTTATAGAGAATGTCTCACAAGAGGATGAGGAATTTGCTCCGAAAACCTTGGACACGTATCTGCATTCATGTGACAGCCCCGAGGATGTTACTATGTTCATAGACACAACCAGTAATAGTGATAATATTTTGGAGTTCCCTCTACAATCGGATGATGTAGCAAGTGTGAAAAGCTCAAATACAACATCGACGcggCGTGAGGATCTTCCTAAACTGGATGGACGCAAAAGAACCAACAAAATCAGAACTTATGCTGCAGATGAGGAGTATCATTCGGGTGATGGCGATACGCAGTCGACACGTCTTTCAGATGACGAAATCCACAAGATGATATCCATATACAAACGTTATCGTCAACTCTGGGACCCGAATCATTTGGATTACAATACCCGAAGTCTAAGACGTCAGGCTTGGTTTGCTTTGACCACCGAGTTTAATAAGACCATACATAGGAATTTCTCTTGGAGATCTTTGTATAGAAAGCTAATCGATTATGCCAAATACTATAAGAAGTTGACAGCCGAACAAAATCCAAATGAGATCAAGTGGATATTCTATAAGGATCTTACATTTTTGGATGATGTGATTGCCGTCAGCAATGAATTGGGTAGATCCATACACCAGCGTAGCACCACATTGAAGCTCATTGAAATCTATCGCGATCTGCCCCAATTGTGGAATATAAGAGATCCCGATTTTAACAAAAGGCCGGTGAAGCAACGCAATATAAACATTATGTGCAATCGTCTGCAGGAGGAGACCAACAAGGACATGAATCCGGAACGCATTAAAAATCGCATCATCGAGCTGAGAACCCAATATCGAGGAGAGAAAAAGAAACGCTTGCGTTGTCTgaacaacaaacaaaagttcTTTCCCGAGTTTGAGTACTACGAAGAGTTTAGTTTCATTGATGCCCATATTGATCCCTTCGAATGTGATATTTGTGGCATGGATTTCAAAAGACTCACCGACTTTAACAATCATCTGCGCAAAGAACACGAACCCAAGCGAAGAAGATTCCGCAATGATAATGGCGAAGAAACTGCAAATGGCCAGAATCTGGACAATGTTTGTCATATCTGCGGTGTTAAATTCAGTAATAGGGGAAATTTGGGCCACCATCTAATCAGGCATGAGGGTGTGCGAAATTTTGAGTGTTCCATGTGTCCGAAAAAGTTCTTTACCTCACATTCCCTAAAGGTGCATGTGCGGACCCATACCAAAGAATGTCCCTATATCTGCGAGAAATGTGGCTTATCCTTTGTGAATGCCAGCAAACTGAATCAGCATGTGCTCAGGCATACCGataagaaaaactttaaatgtGATCACTGTCCGAAGGCTTTCTTTACAGCCTTCGAGAGGGATCGTCATACGCGTTGGCATTTGAATATACGTGACAAGGATTGTCCCATATGTGGCAAGTCCTTTGTCAAGGGTTCCTCCTACTATGCCCATTTGATGTTGCACAGTGATACCAAGAGATTTAAGTGTGATAAATGTGACATGAAATTTGCTCAATATGCCGGATTGTACAAACACAAAAAGAGATATCATAGTACGTAA
Protein Sequence: MLKTHSNALKMSKRTALDANSPQAMLHRALQQPLLLAPPPTPTKQKETTAIATMLQPLQSSLRVEDLNDPNSPHFPDHLGCGEVFTWHCEGEFYAVECRLCDDHPLCPLSEFPLHMEAWHTDWTGKLTIDGEDMDEEEDEEEQNDLYHVLALSPQNNEDSGLCDYDHDDDESGVGGQHLSPASQQMCEEEEEDVLEPFEQVLIEQENNIDTTQVNENDNQAVNERAADAGVGISVNEVKAAGAEEEREVMTEGDENTLTTTVLIASAETTISSNNVCAGETPPTAQTQEQQQQQQQLWNNKSKQYHNTILSAELKSTLKEENHQEANTLQQRENESLTVIRESLYNELCFSENSLSCCHSTAEQLQPSSQPPQQQHAQLTQATVKELTSDHDETTKVPKNCCWPEESYDSNKKQEIQQFPKPTEAGEIIAPQSQHPKDFIKPKTKQQSKDHIQLATNSAKKKSVVEITKVEILNVNNSLMANNNSAEAEMLAPNVKDNSPMPPRKRKRANGKCLSQEINIQPHKSNPPLRGKYLKSFKKFLQKSDTESLSGSEIVENDSSSPNSSPLHCASMEPKRRRLYSRACKKSPTNSLSSETNEYPSTSPSPPPTDCDSHTFLSPAHALEPEVPASPQSDKSSKIRYLVKQCERIAREHSSSAASTISSTSTCCSSNSSLNRGKRNSRRRRSLTPVEVCDIQPTVPLNDHILPIYDDSGNMSPEMLSEHLESLACSLLDYDDFPDDDHSVASTSLTGENILESSPSSPGSPKTEEEHFEFHEPREKLNKMHVLKLIELYQEHTRLWDQTHREFCEPHLCRQSWQDIAERWNAFCNRKFHITEVRIRISTLCQRYLKERERIQREGELDESAKFPYYEQMSFLEQHRSLQKRREVYEQQNEKILEIYQKHLVLWHVRCYKVRQVKERTKAFQSISSELKDIGIYLSSSGVQKRIRSLRKCYRLEKIRHLHAQVERMKFEPTFKHYERMQFLDKHIDPFVCRVCGKIFESLVSFKEHLESSSHGNILEEEDEDEEEPNKPANTSSNVTQDTIVCGTNEKFEISMNVKDLNSVSVFIKPLAMEQQSAVGCNKSSRRDASFNQFPMEDVIMEELIENVSQEDEEFAPKTLDTYLHSCDSPEDVTMFIDTTSNSDNILEFPLQSDDVASVKSSNTTSTRREDLPKLDGRKRTNKIRTYAADEEYHSGDGDTQSTRLSDDEIHKMISIYKRYRQLWDPNHLDYNTRSLRRQAWFALTTEFNKTIHRNFSWRSLYRKLIDYAKYYKKLTAEQNPNEIKWIFYKDLTFLDDVIAVSNELGRSIHQRSTTLKLIEIYRDLPQLWNIRDPDFNKRPVKQRNINIMCNRLQEETNKDMNPERIKNRIIELRTQYRGEKKKRLRCLNNKQKFFPEFEYYEEFSFIDAHIDPFECDICGMDFKRLTDFNNHLRKEHEPKRRRFRNDNGEETANGQNLDNVCHICGVKFSNRGNLGHHLIRHEGVRNFECSMCPKKFFTSHSLKVHVRTHTKECPYICEKCGLSFVNASKLNQHVLRHTDKKNFKCDHCPKAFFTAFERDRHTRWHLNIRDKDCPICGKSFVKGSSYYAHLMLHSDTKRFKCDKCDMKFAQYAGLYKHKKRYHST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -