Basic Information

Insect: Stomoxys calcitrans
Gene Symbol: -
Assembly: GCA_001015335.1
Location: NW:57187-71624[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.089 4.1 7.7 0.1 2 23 24 46 23 46 0.90

2 16 0.0018 0.082 13.0 0.1 2 23 458 479 457 479 0.97

3 16 3.3e-07 1.5e-05 24.8 0.3 2 23 486 507 485 507 0.98

4 16 0.00011 0.0049 16.9 0.3 1 23 513 535 513 535 0.98

5 16 0.00022 0.01 15.9 0.3 3 23 543 563 542 563 0.98

6 16 7.8e-06 0.00036 20.5 2.5 1 23 569 591 569 591 0.97

7 16 2.9e-05 0.0014 18.6 0.2 1 23 597 619 597 619 0.99

8 16 1.4 64 3.9 0.6 2 23 632 654 631 654 0.92

9 16 0.71 33 4.9 0.9 2 23 906 928 905 928 0.94

10 16 0.15 7.1 6.9 0.7 1 23 1270 1293 1270 1293 0.92

11 16 0.0056 0.26 11.5 0.1 2 23 1299 1320 1298 1320 0.96

12 16 0.00014 0.0063 16.6 0.3 2 23 1327 1348 1326 1348 0.97

13 16 0.00017 0.0079 16.2 0.1 1 23 1354 1376 1354 1376 0.98

14 16 0.00045 0.021 14.9 4.0 1 23 1382 1404 1382 1404 0.96

15 16 5.8e-06 0.00027 20.9 2.3 1 23 1410 1432 1410 1432 0.98

16 16 0.0013 0.059 13.5 0.1 1 23 1438 1461 1438 1461 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.089	4.1	7.7	0.1	2	23	24	46	23	46	0.90
2	16	0.0018	0.082	13.0	0.1	2	23	458	479	457	479	0.97
3	16	3.3e-07	1.5e-05	24.8	0.3	2	23	486	507	485	507	0.98
4	16	0.00011	0.0049	16.9	0.3	1	23	513	535	513	535	0.98
5	16	0.00022	0.01	15.9	0.3	3	23	543	563	542	563	0.98
6	16	7.8e-06	0.00036	20.5	2.5	1	23	569	591	569	591	0.97
7	16	2.9e-05	0.0014	18.6	0.2	1	23	597	619	597	619	0.99
8	16	1.4	64	3.9	0.6	2	23	632	654	631	654	0.92
9	16	0.71	33	4.9	0.9	2	23	906	928	905	928	0.94
10	16	0.15	7.1	6.9	0.7	1	23	1270	1293	1270	1293	0.92
11	16	0.0056	0.26	11.5	0.1	2	23	1299	1320	1298	1320	0.96
12	16	0.00014	0.0063	16.6	0.3	2	23	1327	1348	1326	1348	0.97
13	16	0.00017	0.0079	16.2	0.1	1	23	1354	1376	1354	1376	0.98
14	16	0.00045	0.021	14.9	4.0	1	23	1382	1404	1382	1404	0.96
15	16	5.8e-06	0.00027	20.9	2.3	1	23	1410	1432	1410	1432	0.98
16	16	0.0013	0.059	13.5	0.1	1	23	1438	1461	1438	1461	0.98

Sequence Information

Coding Sequence: ATGGACTACAATTTGGAAACATTTACTATTTGTggcgaaatattaaaaaataaaacagaatatATTCTGAAATGTAACGATTGCGATGAAGACTTCATTCTCCTCGAGGATTTCATAATACATCATATTGATTTACACACACCACAAGATAAGAACGTTGAGAACCCTGGAGAAGATAATGAAGAGGACTATTTAGATGGGAGTGAATTTGTTTATTGTGAAAAGGACAATAGCTTACTAGAATTAAATAATGAGGATTCGATTGCAACTTCTCATAAAACAAATGAACAACAATATAGTGAAGATTTGTTTGAGGAAATAGAAGAAAGTACATGTGTGGAAGAAGAAAAGGACCAActtttagaaacaaggtcaatTATAGATGTTGCTGATAGCATTCCTGATGATAGAGAGGACGAGAATACCGACGATTTGGAATTTGTTGAAGAAGAGGATCCACTAGAGGAACCAATGGTAggtgatgctgatgatgacaaAGCGGATGATGAATATGATGACGGCGATGATAACTCAAGTCAAAACTACGAGCCTGACGACAACGCTGAGAATTCGGACTCTGATGTAGAGtttgaagcCACTGTAGATAGAAAATCAAGGCAGTTTGTAAACAATTTTCTTAAGATAGAGCGAAACTTCATAGCATTTGTGGCTGCCTACAAAAATCAGCCTCGTTTGTGGAATCTTGAAGCATatccaaaatttaaatcaaaaacaGAACGCGATAGTTTCTTGCAAAAAGTGGCCAATGAAATCAAAAGCCACCTAAACATACATATGACATGCGACAATGTTTCTGACGTAATAGAGCGCATAAGGCATGATTATAAAGCAGAACTTAAATGCTCTAGACCTCATGAAAGTAATGAACGTAATGGAGCTCCAAGCTCTACTACTTCAAGGCTTAGTTTCCTTGATCCATTCCTAGACAACAATTCTATGGTTAAACTAGACACACAACGTGGAAACTTGAAGAAGGATCAAATTTTGGACATCCTGCGTATATATAAAAGATTTCCCTCTCTTTGGGACACATCATTAATGGAATATGTGTGCACAAACAAAAGAACCGAAGCCTTGAAAGAAATGACTGAAGCTGTACGAACGGAAGTTGGCTTGAACCTTGATGAAGATGctttaaaaaattatcttttggGTGTACACAATcacttcttcaaagaaaaacaaaatcatatgTCCAAAAAAGGCAGCAcgaaaagtatatattttcctcATATGAGTTTTCTTCATGATCATGTCGGACCTTTTTGCTGTTCCAAGTGTGGCCGAAAACAAAGGAATCCCTTGCAATTCAAACTTCATAAATATCACAATCATGGAGCCTCACCCTTAAAATGTCCCGAATGCAAAAAAGAATATGAAAAGTTAGAGCCTTATATTGCTCATATTAGAAGACATATGAATGATATGAGTGATAAGTGTAAGTTATGCGGAAAAATGTTCATAAGAGCTGCAGATCTAAGAATTCACATGCGCAGCCACACCGGCGCCAAACCTTACATTTGTGAAATATGTGGTTCTTCATTTACCATGCCAAATTCTCTTAAATTGCATAGAATGCgccatgaaaatataaaaaatgtattttgtgAGATCTGCTCCAAAGGATTTTCTACCAGTACAAGATTAGCAGCTCACATGGTCACACATTCCGATgaacgaaattttgcttgtaaaaCCTGTGGAAAGGCTTACAAGAGCAAGAAAACCTTGCAGgctcatatacacacacacgaaGAGGGTCGAAACTACCCATGTCCACAGTGTGGCAAAATGTATAAGAATCGAATAGGGGTATTACAGCATCTAAGGACACACCGCAGCACTGGTGTAACAAAATCGAATCCATTTATAAAATGTGGTGATTGTAATGGTGATTTCTATAACTTCGAGGATTTTGTAATTCATCACTCTGAGCGGCATTCGTTGCAAGATAAGAACGATGAAAGGCCAGGCAAAGACGATGACGAATGTGAGATCAAATATTCCAAGCAGGAGCATTTCATTCCACAACATAATGAAGAAGAGGTGATTACTATGCGTACTCGTCAGATGACGAAACAACAATGTACCGAGGATGTCTTTAAAGGGATTGATGATACTAAAAGTAACGATGATAAGGAGTTCTTGAAGATTGAACCGATGATGTTTGTAGAAGTTGAACAAGCAAAAGAGGACGAAAGTGATGAATCGGATGAAGATGAAAATGAAGATGATGAAAATGAGtttaaaggCGAGGacataaaatgcaaaaaatttgtttccGAATTTCTAGCGTCTGAAGAAAACTATATTACTTTTATAGAGGCGTACAAAAAACAACCTCAGTTATGGAACTATAAACTCTATCCCGTTTTATGTACCCAAAAAGATCGGGCaatttatttcattgaaattgaaaaggAAATACAGGAACGATTAAATGTACAAATGTCACACGAATATGTTCGTGCAACAATTAACAACTCAAtcgctgtttttttttatgcgtTGAAGATGTGCCatgaaaccaaatttaatatccaatgcCTGTTTGAGGTGCATACAGCTGTTTCCTATAAACACAATTTTGTAAACAAACTCACTGAACCAACAACCTCTTATAAAGCCATGGACTACAATTTGGACCTGAGAAATTGTGGAAAAATATTAAGAACTCCAACCCAATATCTTCTGCGATGTGGCGATTGCAATGAAGATTTCTATATCTTTGGGGACTTTATAACACATCATTCCAAGCTCCATTGTTTGCAGGATAAGGACGTTGATAGTCCAGACGAAGATGATGCCGAAGACTATTTGGATGAATGTGAGATCGAATACTGCAGTGAACTGAATGACATTCCTGAACATGATGCAGATGAAATGATTGGTACTCAAAGCCGTCATAGAATGAAACAACAATGCACCAAAGACATTTTTCAAGAAATTGCCGACGGCGAAAGCATTCATGACGagGAGTTCGTGAATATTGAGCCCATGCCTTTTATGGAAGATGAAAAAGCCAAGGAGAACGATAGTGCTGAATATTTTGAATCTGATGAAGATGGGttcaAAGACGAGGACATTAAATGCAGAAAATTCGTTTCCGAATTTCTAGATTCCGAAGAAAACTATCTTGCTTTTATAGACGCCTATGAAAATCAACCCCGCTTATGGAACTATAAACTCTATCCCGTTTTATGTACAAAACAAGATCGAGCTGtatatttcgccgaaattgcaGAAGAAATACATAATCGACTGAATATACAAATGTCGGAAGATTACGTTCGTGCTATAATTTATCGTATTCGAACTAAGTACcgggaaaaatcgaaaaaattagcAGACCGCAAAGAACGAGAAGGAGGGAGTCCAAAGTTAGCAACCGTACCTACATggtattttcaaaaattgcaatttttagaGCCCTTCCTAAGCAAGGAGTCAATCTTTAAATTGGATCCAAAACTTCCAAATATGACACAGGAGCAAGTGATAGAATTAATTCATATGTACGAAATGTTTCCGAATTTATGGAACACAAACCTATTGGAGaatgtttgcaaaaataaaCGAGATGAATCTTTAAAGCAGCTGGCGGCTGTGATACATTCAGAGACTGGTTTAGAGGTCAGTGAATTTTCTTTACAACGATACTTAAATGAATTACAAAAATGCTTCTACAACGAAAAGGCTAAAATGTTGCGAAGAAAAGTGGACTCACAAATCAATTCATCTATTTACTATAAGGAAATGTTCTTCCTGTATGACCACGTGGGACCATTTAAATGTCCTCAATGCCCTAGTAAATATCGAGGCCCACTGCTATTAAAAGTGCATAAAACACAAAAGCATAACGGTGATCGTTTGTCATGTCCCCAATGTGGCAAGCAATATGAGCAGTTGGAACCGTATATAACGCATGCCAGGCGGCACATGAACGACTTGAATGTGGAATGTCCTCAATGtgataaaatgtttttaagaaAAGCAGATATGAGAATACATTTGCGAACCCACACCGGAGATCGGCCTTATTCCTGTGAAATATGTGGTGCTACATTTTCGAATCCGACTGCTATACGAGAGCATAGAGAGAGACAtatcaaagaaataaaattccaTTGTCCGGTTTGTTTTAAAGGCTTTTACAGTAAAAAGAATTTGAAGAAACACTCTATTTCGCATACAGATGTAAGGAATTATCCTTGCAAAATTTGCGGTAAATCCTTTAAAACTAGAAAAACTATGAAAAATCATGAAACTACTCACGAAGAAGGTCGTAATTATCCATGTCCAATGTGCGGTAACATGTATAAGAATACAATAGGTGTATCTCAACATATGAGAACAGCACATCGTGACGTTGCAGGAACTAAATTTAATCCGTTTATTGATTAG
Protein Sequence: MDYNLETFTICGEILKNKTEYILKCNDCDEDFILLEDFIIHHIDLHTPQDKNVENPGEDNEEDYLDGSEFVYCEKDNSLLELNNEDSIATSHKTNEQQYSEDLFEEIEESTCVEEEKDQLLETRSIIDVADSIPDDREDENTDDLEFVEEEDPLEEPMVGDADDDKADDEYDDGDDNSSQNYEPDDNAENSDSDVEFEATVDRKSRQFVNNFLKIERNFIAFVAAYKNQPRLWNLEAYPKFKSKTERDSFLQKVANEIKSHLNIHMTCDNVSDVIERIRHDYKAELKCSRPHESNERNGAPSSTTSRLSFLDPFLDNNSMVKLDTQRGNLKKDQILDILRIYKRFPSLWDTSLMEYVCTNKRTEALKEMTEAVRTEVGLNLDEDALKNYLLGVHNHFFKEKQNHMSKKGSTKSIYFPHMSFLHDHVGPFCCSKCGRKQRNPLQFKLHKYHNHGASPLKCPECKKEYEKLEPYIAHIRRHMNDMSDKCKLCGKMFIRAADLRIHMRSHTGAKPYICEICGSSFTMPNSLKLHRMRHENIKNVFCEICSKGFSTSTRLAAHMVTHSDERNFACKTCGKAYKSKKTLQAHIHTHEEGRNYPCPQCGKMYKNRIGVLQHLRTHRSTGVTKSNPFIKCGDCNGDFYNFEDFVIHHSERHSLQDKNDERPGKDDDECEIKYSKQEHFIPQHNEEEVITMRTRQMTKQQCTEDVFKGIDDTKSNDDKEFLKIEPMMFVEVEQAKEDESDESDEDENEDDENEFKGEDIKCKKFVSEFLASEENYITFIEAYKKQPQLWNYKLYPVLCTQKDRAIYFIEIEKEIQERLNVQMSHEYVRATINNSIAVFFYALKMCHETKFNIQCLFEVHTAVSYKHNFVNKLTEPTTSYKAMDYNLDLRNCGKILRTPTQYLLRCGDCNEDFYIFGDFITHHSKLHCLQDKDVDSPDEDDAEDYLDECEIEYCSELNDIPEHDADEMIGTQSRHRMKQQCTKDIFQEIADGESIHDEEFVNIEPMPFMEDEKAKENDSAEYFESDEDGFKDEDIKCRKFVSEFLDSEENYLAFIDAYENQPRLWNYKLYPVLCTKQDRAVYFAEIAEEIHNRLNIQMSEDYVRAIIYRIRTKYREKSKKLADRKEREGGSPKLATVPTWYFQKLQFLEPFLSKESIFKLDPKLPNMTQEQVIELIHMYEMFPNLWNTNLLENVCKNKRDESLKQLAAVIHSETGLEVSEFSLQRYLNELQKCFYNEKAKMLRRKVDSQINSSIYYKEMFFLYDHVGPFKCPQCPSKYRGPLLLKVHKTQKHNGDRLSCPQCGKQYEQLEPYITHARRHMNDLNVECPQCDKMFLRKADMRIHLRTHTGDRPYSCEICGATFSNPTAIREHRERHIKEIKFHCPVCFKGFYSKKNLKKHSISHTDVRNYPCKICGKSFKTRKTMKNHETTHEEGRNYPCPMCGNMYKNTIGVSQHMRTAHRDVAGTKFNPFID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -