Basic Information

Insect: Stomoxys calcitrans
Gene Symbol: -
Assembly: GCA_001015335.1
Location: NW:688930-746370[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7.8e-06 0.00036 20.5 1.3 1 23 685 707 685 707 0.97

2 20 0.00015 0.007 16.4 0.5 1 23 713 735 713 735 0.97

3 20 6.2e-05 0.0029 17.6 0.4 1 23 741 763 741 763 0.98

4 20 5e-06 0.00023 21.1 3.0 1 23 769 791 769 791 0.97

5 20 6.7e-05 0.0031 17.5 4.7 1 23 797 819 797 819 0.99

6 20 0.00012 0.0056 16.7 5.7 1 23 825 847 825 847 0.97

7 20 5.7e-07 2.6e-05 24.0 4.3 1 23 853 875 853 875 0.98

8 20 2.1e-07 9.9e-06 25.4 2.4 1 23 881 903 881 903 0.97

9 20 1.5e-05 0.00068 19.6 5.4 1 23 909 931 909 931 0.97

10 20 2.9e-05 0.0013 18.7 8.4 1 23 937 959 937 959 0.97

11 20 0.00012 0.0058 16.7 6.7 1 23 965 987 965 987 0.97

12 20 3.6e-05 0.0017 18.4 6.5 1 23 993 1015 993 1015 0.98

13 20 1.4e-05 0.00065 19.7 4.4 1 23 1021 1043 1021 1043 0.98

14 20 0.00015 0.0071 16.4 7.1 1 23 1049 1071 1049 1071 0.98

15 20 3.4e-06 0.00016 21.6 7.9 1 23 1077 1099 1077 1099 0.98

16 20 1.3e-06 5.9e-05 22.9 7.7 1 23 1105 1127 1105 1127 0.98

17 20 0.0004 0.018 15.1 9.5 1 23 1133 1156 1133 1156 0.95

18 20 0.00034 0.016 15.3 0.5 1 23 1162 1184 1162 1184 0.97

19 20 0.00049 0.023 14.8 4.5 1 23 1194 1216 1194 1216 0.98

20 20 1.8e-05 0.00082 19.3 1.6 1 23 1222 1245 1222 1245 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7.8e-06	0.00036	20.5	1.3	1	23	685	707	685	707	0.97
2	20	0.00015	0.007	16.4	0.5	1	23	713	735	713	735	0.97
3	20	6.2e-05	0.0029	17.6	0.4	1	23	741	763	741	763	0.98
4	20	5e-06	0.00023	21.1	3.0	1	23	769	791	769	791	0.97
5	20	6.7e-05	0.0031	17.5	4.7	1	23	797	819	797	819	0.99
6	20	0.00012	0.0056	16.7	5.7	1	23	825	847	825	847	0.97
7	20	5.7e-07	2.6e-05	24.0	4.3	1	23	853	875	853	875	0.98
8	20	2.1e-07	9.9e-06	25.4	2.4	1	23	881	903	881	903	0.97
9	20	1.5e-05	0.00068	19.6	5.4	1	23	909	931	909	931	0.97
10	20	2.9e-05	0.0013	18.7	8.4	1	23	937	959	937	959	0.97
11	20	0.00012	0.0058	16.7	6.7	1	23	965	987	965	987	0.97
12	20	3.6e-05	0.0017	18.4	6.5	1	23	993	1015	993	1015	0.98
13	20	1.4e-05	0.00065	19.7	4.4	1	23	1021	1043	1021	1043	0.98
14	20	0.00015	0.0071	16.4	7.1	1	23	1049	1071	1049	1071	0.98
15	20	3.4e-06	0.00016	21.6	7.9	1	23	1077	1099	1077	1099	0.98
16	20	1.3e-06	5.9e-05	22.9	7.7	1	23	1105	1127	1105	1127	0.98
17	20	0.0004	0.018	15.1	9.5	1	23	1133	1156	1133	1156	0.95
18	20	0.00034	0.016	15.3	0.5	1	23	1162	1184	1162	1184	0.97
19	20	0.00049	0.023	14.8	4.5	1	23	1194	1216	1194	1216	0.98
20	20	1.8e-05	0.00082	19.3	1.6	1	23	1222	1245	1222	1245	0.96

Sequence Information

Coding Sequence: ATGAATGCTACTGATCATGCCATAGCTCCTGGAGAGTCAacggcaacagcagcagcacatTTGGCAGCAATTATAGCAAATACAGCGCATGCGAATGGATATGATCATCATCAGCGGCATCAACAACACAACAATCGACCTTCACCGCTCCAACAAGCACacaatcaccatcatcatcccGCCGTTGCTCATTCACAATTGAACGagTCGCGCGGCAACACTACTTCCGAAGATAGCGTTACTTTGCTCCATTCATCGATAACAACACAACATCGATATATACCCCTCTCAGATACCTCATCGATTGTTGATATTTCTAACGGTAATCATCTTATTAGGAATTTTGGTGCTGGCAATGCTTATGACGATATTGTTTCCCAAAAGTTGGTAATCATGTCTTCAACGGCTGTTTCTTCGACTTCGACGTCGGCAGCATCCACAACTGCCAGTAATACAAGTTCAACATTAGTGATGGCAACGACAGAAGCTGCAGCCGCAGCGGTTGAATCGTCTGTTTCTGGTATTGTTGCTAATAATAATAATGCTATTACAGCCACAGCTATTGCATCTGGCGCAACAGCGCAGGTTTCTAATGAACAACACCAACCTCAGCCGCACcaaaaccaacaacagcaccatcaacaacaacatattgTCAATCAAACGTCTACAAATGCGGCTTTATTGGTTACAACTTCAGGTTCAACACCAACGGCGGCTACCAATCCACCACAGTCTCAGACCACGGCTACAATTTTAGCCAATAATCCTCAAAATTTGGGCAAATATTGGGTGGTAACAAATTTATTTCAAGGCCAACACGGACAGCAGCCGCCTGCACCTACGAGTGTTGCCTATAGCCAAAGTGGTGTTGCCAACGGTGGCGGCACTGGCGGTGCCACATATACCCAAACATCTATAGCTGGTATACCATCATCGACTTTGGTACGTGCAATATCAACAACAGCAGCCTCAGCTGGTGTTACAAAACCATCGGAAGCGGCATCAAGTAGCAGTGCGGGAACACTGCAAATACCGCAAACAACTCAAATGTTGTCACAGGCAGCCGCCTTAGGGCAACAGTTGCCAAATGGTACTATAATAACAACACAGGccgcccaacaacaacaacagcaacgacaTGCAGAACACCAACAACAGTTACATGTGCATGCTTTAAACTCTGCAGAAGATAAcaggcagcagcaacaacaacagcagcaacagcaacaacaacaacaaatagcacagcagcagcaccaacaacagcagcagcaacaacatcaacaacagcagcagcagcaacagcacgTCGGTGTTCTGCAAACTAATGATGCAATTAAAGATGAAAAGCCTTCATTCACTTCAAATGGTAAAATTGCCACCACCAATCAACAGATAATCATGCAGCATATATCAACAGCATCGACGGCAGCTCCAGCAACCTCAGGAGCCACTACCATAACTTTGGGCGCTCCCAAAGCTGAAATTAAGGACGATGGCAGTGTGGTAGTTGGCGGTAAAATACACCCTGGCATCGAAATGTACAAGGTTAATATTGAAGACATTTCGCAATTGTTCGCCTACCACGAAGTATTTGGCAAGATGCATGGCGATGTCATAAATCATCCTTTGGCGGTGGCACATGGCATACCGGTTTCATCGAACAACAGCAGTATTGCACCCGCAGTTGCAGCCGCCTCCGCGAATGCGAATGAAGCAaatcagcaacagcagcagcagcaacaacaacaacaacagcaacatcagcaGGCCAATGCTGGGGGACAAGTGGCCATCAGTGGAACCGTGGCTATGCAGCAATCATCGGAATCGACCATAACTACAACGGCTACAGGCAGCGGAACTGTAGCCGCCACTACCACAAGTGCCGCTACGGCTATAGCCAATAGTACTGGAGCAGCGGCCACCACGACGGCTGGTGGTGCGGCAGCTGGCCTCTTATTGCCCAAAATGGAGGGCGGTATTGCGGCCGTCGATCAAAGCGCCATCACCTTGGCTCCCGATGGCACAGTGGTCTCTACTGGAGAACATGTTTGCGACATATGCGGCAAAATGTTTGCCTTTCGTTATCAATTAATAGTGCATCGCCGTTATCATACGGAGCGAAAGCCTTTCAACTGTCAGGTTTGTGGTCAGGGATTCTTTACCTCTCAAGATCTGACTCGTCATGGCAAAATTCACATAGGTGGTCCCATGTTCACTTGTGTGGTGTGTTTCAATGTCTTCGCTAATAACGCCTCACTGGAACGCCACATGAAGCGGCATTCGACGGATAAGCCATTTGCCTGCACGATATGTCAGAAGACCTTTGCGCGCAAAGAGCATTTGGAAAATCACTTCCGTTCGCATACCGGCGAGACACCGTTCCGTTGTCAGTACTGTGCAAAAACCTTTACTCGCAAAGAGCATATGGTCAATCATGTGCGCAAGCACACAGGAGAGACGCCGCATCGCTGTGACATTTGCAAGAAGTCGTTTACGCGTAAAGAACACTATGTCAATCATTATATGTGGCACACCGgTCAAACTCCTCATCAATGCGAGGTGTGTGGCAAAAAGTATACGCGCAAGGAACACTTGGCCAATCACATGCGATCCCATACCAACGATACGCCTTTCCGTTGCGAAATCTGTGGCAAGAGTTTCAGTCGCAAAGAACACTTTACCAATCACATTTTATGGCATACAGGCGAAACACCCCATCGTTGTGACATCTGCTCGAAAACCTTTACGCGCAAAGAACACTTACTAAATCATGTGCGACAACATACGGGCGAATCGCCGCACCGTTGCACCTACTGCCCGAAAACGTTTACGCGCAAAGAACATCTAACAAATCATATACATCAACACACCGGCGAAACTCCCCATCGTTGCGATTTCTGTTCGAAAACTTTTACGCGCAAAGAACACTTACTAAATCATGTGCGACAACATACGGGTGAATCTCCGCATCGCTGCACTTATTGTCTTAAAACGTTTACGCGCAAAGAGCATTTGGTCAATCACATACGTCAACATACCGGCGAGACGCCATTCAAGTGCAATTATTGCACCAAAGCTTTTACACGCAAGGATCATATGGTTAATCATGTGCGCCAGCACACGGGCGAATCGCCGCACAAATGCACATTTTGCGCCAAAACCTTTACGCGCAAGGAACATTTGACAAATCATGTGCGTCAACATACCGGAGAGTCACCGCATCGTTGCACCTATTGCAAAAAGACGTTTACGCGCAAGGAACATCTAACGAATCATATACGTTTGCATACGGGCGATTCGCCGCACAAATGTGAATACTGTCAAAAGACATTTACGCGCAAGGAACATCTGAATAATCATATGCGTCAGCATTCGAGCGATAATCCACACTGTTGTAACGTCTGCAATAAGCCATTTACGCGCAAGGAACATTTAATCAATCACATGTCTCGTTGCCACACCGGCGATCGTCCGTTTGCTTGCGAGACATGCGGCAAATCGTTCCCTCTCAAGGGTAATTTGCTCTTCCATCAACGTAGTCATACAAAGGGTcaggaaatggaaagaccaTTTTCATGTGAAAAATGTCCCAAAACATTTATCTGCAAGGGTCATTTGGTGTCGCATATGCGCTCTCATTCCGGTGAGAAACCACATGCGTGTACTTTATGCAGCAAGGCTTTTGTGGAGAGAGGAAATCTAAAACGTCACATGAAAATGAATCATCCGAATGCTCCCATGCCACCTCCACCAGTGCCACATCCCATAATACCTGCCGGTGTATTGCCGCAGATAAAACAAGAAATTAAACCAGTTATAAGTGAATTAACTCCTTTACAATCAGCTCCAATTGCACATACCATACAACAGTTAACAGGTGGTGCTGGAGGTAATACAGTGCAATTGCCCACAGGTCTAGTGCCTTTGGTTACATCCACAATAACATCTCATGCCACCCAGAAACAAgtaccgccaccaccaccacagcaacagcagcaagcGCAACCGCCGCAACAGCAGCAGGCGCAGGCACCACAAGCCCAACaattgcagcagcagcaacaacagttaATGCATCAGCAAGCTGCTGCAGCTGCCGCAGCGGCACACCAACAACAAGTATtgcatcaacagcaacaacaacaacatcaacaacagcagctaATGCAATTATCATTGCAACAGGCCGCCGCAGCGGCGGCAGCTCATCAGCAATTACAACAGCCCTCGTCTCATCAAACGactcaacagcagcaacaacaacaacaacagcagcagcaacaacaacaacaatcgcaagcccaacaacaacagcagcagcaaccacCGCCACCACAAGTGCCAATTGCTTTAATACAAACGACGGACCCTGAAGCTTTGGCGCGCGCTGCTATGCATATGCCACCCAATGTGGAACAGCATCCAGTCGTTTActaa
Protein Sequence: MNATDHAIAPGESTATAAAHLAAIIANTAHANGYDHHQRHQQHNNRPSPLQQAHNHHHHPAVAHSQLNESRGNTTSEDSVTLLHSSITTQHRYIPLSDTSSIVDISNGNHLIRNFGAGNAYDDIVSQKLVIMSSTAVSSTSTSAASTTASNTSSTLVMATTEAAAAAVESSVSGIVANNNNAITATAIASGATAQVSNEQHQPQPHQNQQQHHQQQHIVNQTSTNAALLVTTSGSTPTAATNPPQSQTTATILANNPQNLGKYWVVTNLFQGQHGQQPPAPTSVAYSQSGVANGGGTGGATYTQTSIAGIPSSTLVRAISTTAASAGVTKPSEAASSSSAGTLQIPQTTQMLSQAAALGQQLPNGTIITTQAAQQQQQQRHAEHQQQLHVHALNSAEDNRQQQQQQQQQQQQQQIAQQQHQQQQQQQHQQQQQQQQHVGVLQTNDAIKDEKPSFTSNGKIATTNQQIIMQHISTASTAAPATSGATTITLGAPKAEIKDDGSVVVGGKIHPGIEMYKVNIEDISQLFAYHEVFGKMHGDVINHPLAVAHGIPVSSNNSSIAPAVAAASANANEANQQQQQQQQQQQQQHQQANAGGQVAISGTVAMQQSSESTITTTATGSGTVAATTTSAATAIANSTGAAATTTAGGAAAGLLLPKMEGGIAAVDQSAITLAPDGTVVSTGEHVCDICGKMFAFRYQLIVHRRYHTERKPFNCQVCGQGFFTSQDLTRHGKIHIGGPMFTCVVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLENHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDICSKTFTRKEHLLNHVRQHTGESPHRCTYCPKTFTRKEHLTNHIHQHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCNYCTKAFTRKDHMVNHVRQHTGESPHKCTFCAKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQEMERPFSCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPNAPMPPPPVPHPIIPAGVLPQIKQEIKPVISELTPLQSAPIAHTIQQLTGGAGGNTVQLPTGLVPLVTSTITSHATQKQVPPPPPQQQQQAQPPQQQQAQAPQAQQLQQQQQQLMHQQAAAAAAAAHQQQVLHQQQQQQHQQQQLMQLSLQQAAAAAAAHQQLQQPSSHQTTQQQQQQQQQQQQQQQQSQAQQQQQQQPPPPQVPIALIQTTDPEALARAAMHMPPNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -