Basic Information

Gene Symbol
Arid2
Assembly
GCA_001015335.1
Location
NW:73945-85327[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-24 6.3e-21 74.2 0.0 2 89 76 161 75 161 0.93

Sequence Information

Coding Sequence
ATGTTGCTTACCGAGCCGGTCAAAACAAATAACATGCATAAAGTTCAACAAACAGATATTTCATTAATTACATCTGCGCCAAGTAATTCGGCAGTACCAGTTCAAGCGCCGACAACACCATTAAGATCGTCGCGGAATCAAAATCGCGGTGATAAGAATTCAGACGATAGGTTTGAGAGGGAAAACAATGCTACAGCGACAAAGGGAAGAAATCCTCCTAAACCACCCGATGAGTTTTACAAAGACTTGCAACAATTTCACGAAAAGAGAGGGACTACCATAAGAAATATACCGAGAATATCTGGACGTGAAGTGGACCTTCATCGTCTGTATTGTGTGGTAACCAACAGGGGAGGGTTTCTTAAAGTCAATGCAAGAGATGAATGGGACGATGTGCTGCCCGAGCTGGGGTGGAAAGAAAAAATTGTGAATGGTTCGGCCggcttaaaatttatttatcgaCGTTTTCTGGAAAAGTATGAACGCGTGAGTTTCTTTGGCGAAGACCCAGAAAAAATTGATGCCCAAGAGGCAGCTGAATTGGCTGAGATGATGGGAGCAGGCGGTAGTGGTAGAGGCGGCAGGGGAAATTCCCGCTATCCTTCAACTTTATTTGGAGGCGGAGCATCCACAATGAACAACATTGCAATGACTTATAATTATAAACAACACCATGTAAATATGGATCGACGGCGCCAATTCAAACTATCTACCGATTTGCATAAGTCATCGCCCTATGAAAAACTGATGTTATCTCTTCTATCACCTTTACCAAATGAACAAGATTTTGCCATAAATGCCTGTACTTTAATGGCTAATGAGAGCAAACATACGCTGAAAGTAAATGAGTATCCAAAATTATTGGATGCTTTACTGGCACACACCGGCGTTTACTCCGATTATTCAATGAGAAAATTATTTCAGCATATCTACAATGGGGTGCGCCATCATTCGCTCTATGGCTTTTGGTATGATTTGTTGCATGGCCATCCCCAAATTCTAGAACTGTACACCGATGAGCAGACTTTAATGGATTCGGGTGTAATAGATGATTGGGACGATGGAAAACAGGGCATTGAGGAGGGTATTTGGTACGATTCAAAAGAATATGATTTCTTGAATTTAGGCCGTGGCCTGGGTACTCACGATTACGTCGGTCAACGTGTTCTTCAAATTGTGGCCATCTTACGTAACCTCAGCTTTATTGCTGAAAATTTGCCTGTGCTGGTTAAAAATAAAACCCTGTTACGCTTTTTAGTTATGGGGTCCAACATTAGATGGAGCAATGTACATATTCAAGCTTTGGAAATAACCGGCAATATTGCTGCAGAAATCGAAATGTTAGATCCCACAACAGACGAACTTAGCCGCTGTCTCATGGCTACTATTTGTGACGGTATCGATGGACCGGACCGTGGTGTCATCATAAATTGCTTGGAAATTCTTTACAAACTATGCCAACGAGAAGCTAACGAAGAATATATCCTTAAgtgtttaaatgaaaaattttacaacaCTATTGCCCTCTTTTTATCCCTAAATGATATAATGCTGCTGTTATTCACTCTGGAAGCTATATACGCCCTTACTTGCATGGGTTCGAAAAGTTGTCAGTCAATGATGCATGTCCGGGGTATTGTGGATCAATTGATATCATTGATTACAGTCGAAGCTCAGTCGTATGGTCCCGACGGTTGCATTCTAATGAGAGTGGTAGAAACAGTGCCTGGAAATATGCTCCCAATGGTAGCACAAAACATAGCCAACTTGCAAAATGCAGCTGTCATGCACAAGTCAACCCCTCATGCTTCAATCATACACAAACAGCAAATAATTCCAAATCCAAATATTATGTCCGACGTGGTGGATAGCATACTTCCATTTCATGGCGCTAGCTCTGTTGTCACACCTGTAGAGCACCACCACCATAATCAGCAACAACatcattcacaatcccaacaaCCGCAACAGCCCCAACCACAAAATAATCCTCCTCCTCCACCTCAAATGCAAATGCCTCCGAACTTCACACAGGACGATGATCAATTTGCCTTGGCCTGGTTAGGTGCTACATTTGAGCGTGCAAATACTGAATGTCATATTGAACAACAGGAGTTGTATCGCATGTACTTGTCGCACTGTCAGAAAGCCGGAAAACAATCGGTGCTAAATCATATGCAATTCCCGAAATTGATGCGATTAATTTTTTCCTCCGCTGTTGGCCCAGCGATAGTGCGAAGGAGCGATGGAACGGAGTTACCTGGCACATATTACATTTCTCTAAGGATGCGAGCTCAGCCCTTGCCTATGCAACAAAAATCCACCTTAGTGACTCCAGGGCCAAGCTCCCCAGGTGGCAAACAGAATGATAACAACTCTCCCAcgcgaaaaattaaaaagaaattgaaagaTGGGAATACCTTAGCAGCGACCAATGTCTCGTCTGAAGGTGGGGCGTCGCAGCCTGTTGTAGAAAATGCACCCAAAGCAATAGTTGCAGCCGTAAGTCCAAAACCTCAAATAGGTGTCATCGAAACGACAAATAATCAAGAGTCATCTGCAATGCTACCACAACCCAATGTTGAAATAAAATGTGACGAAAAAATGGACATAGAGGAGCCTGCGGAGGCAGCTAAGGTAGAAGAACATGGCTCAGTTCAGCCAGTACAACCATCTCAAGCAAGTGATTCTTTAGCAGCGTCTACTGAACAGTCACCGCAATTAAATCAGGCTCATCCACAACACGCCTCCCAGACATCACTCATTAAGAGCCTTTTGGCAAATAAAGTTAATCAAAGACAGCAAAAGCAAAAAGATCAAACCACAGCGAATGCAAGCACCAGCACACCAAGCACAAGCAATATACCATGTGGCAGTGGACTTTCAACGGTAGCATCCTCACCACAACCAATAAAAGTTGCTAGCACGGCCATAACAGCATTAGTAAGCAacccacttatgcaaaataccCCAGTGAAAGTTGGGCAAACTACCATAAAACCCTTGAATCCCACCCTGTCTATGGAGAAGAAGCAAACCCACATTTCCgagtccacaccaccccctttGGCTCCACTAAGTGGAGCAAATGTAGCCAAAGATTCTTCGGGAAGACCCATTCTCTTGGCAAATCAAATGTTGGTGGATATTTTGGATAAGAAAATGATTGAACCACCCATACCAGCGACCATAATTCAGAAACGTAAAGTGGAAGACACTTCGGCGCAGAACAAACGTATGGCCCTTGACTCCTCGTCAATTAATGCAAAGGATTCTGAAGTGCCGGTTACGCCCTCCAAAAATGCAGCTAATCTGTATGCTGAAATGGCAGCTTCAATTTTAGAAGATGAAGATTTGGAAGAATTGTCAGCACAACAGAACAATCTGATGACCGAACAGCCTATGCAACAACATCCGCCGTCGCTTATAATTCCAGCTGCTAAGGTGCAGACCGCCGTTCAAAATGTACCCAGACAATTGGTATTTCAACACAATCAGCCGTCTCAGCTAAAGGTTACCCAAGCGAATTCATCTGCTGGACAGACTACACATCCTATGCCAAATGCAGTGGCAACCATAAAAACTGATCAGGGCCTGCAAACCGTACCCGTTATTTTGCACCAAAAGCCTTTAGAGGCCACACAACATGGCCAGCCACAGCAGATAATACAGCAGGTTATTCAACAACAGCCAGCAGCTTCCCAAACGCAGACCACTCAATACGTTTTGGCCACCAATCAACAGGGTCAAACCTATTTAGTAGCGCAACAAACGCCACAGTCACAACCCGTAGTGCAGCCTCCTCCACCAACGCAAACGGTTCTGGTCACACAGACACCGCAACAGCAATCGACTGGGGGGAAGACGATAATCATATTGCAGCAAAATAGCCTACCAGGTCCCTCAGGAGCGCCACAACAAATCATAACCACCACGGCACCAGGACAGCAACAGAAAATGATAATGACTACACCACAAGGTCAACAGGTTTTGCTGACACAAAGGCCACAGACGCCACAGCAGATCTTTATAAACCCCCAAACAGGTGCGGCTACTCACATCCAACATGTGCCAGCCCAATCAAGGCAAATTATACAAACCACAACTACACAAACTATGCCTAGCGTCCAACAAAATTCGCAATTGCAAACTGGACAAATGTCACCTTCTCTTCTCAATCAATTGAATCAAATTCCAGCTACCATAAAACTTCATCAGCCAGTAGCTCAGGTAAATACAGCCATTCAGCCCTCTCAACAAAACACCGTGTCTAGAATGTCCATTGGAACCAAAGGTGTAGCTATAGTACAAGGACATGCTGCAAATCCACCCGCAACGCCAGTAGCTATACCCCAATTGCAACAACATCAATCCATTATACAGCAACACATAATATCGGGGCCAGCGGAAAAACGCCATGTTATATTGGGTGGCGGAAGGGCAATTGAAATAAAGGAAACGCTTATAACCCAAGCTCAGCCACCGCCGCAACAATGTCAGTTAAATTCGCAAACGATTATAACAACACAACAGCCCACACAATCAACTGTTGCCACAAACAtaatacaacaacatcaacagcaacaacagcagcagcaaacacaacagCAACATTTGCCACAGCAACAGCCACAGCCACAAACTCAAGCAGCCGCAGTGCTCACACCAAAAGTGTCAACTGTGGCAGCCACAATGACATCACCTCAAACACCTGCATTAATAGCAGCAGTAAAGACAAGTgaaacacacacaccaacagcaacaccaccaccatcTTTAATACAAACTTCAAATCAAAGtaatttaaagaaaagtttGACTCCAAGTCTGCCGCCCACATTGATAAAGCCTTCATTACCTACGGTGAAATTGCCACCGGGTGTTGGTAGTGGACCTCCTCCATTAGCTGCAGTAAATAGTAACGCTACTACACCCACACTAATAGCTAAAACAGCACCCCATTCAGCAATAGAAGATAAAAAGGAGGATTCGTTGGTTAAGGTAGCTCCTCCACCTGCCACTTCTGCACCACTACATGTGCCTGTTGTCGCAAGTAACACTCTAACGGCAACTACACAGGCGGCATGTGGAAATCAAACCTCCAACGCAGCATCAAATACAACAGCCAGTGGAAATCCGCAAGCGGCAACTGCACCGAGTGCTCCACAAGCACCAAACACGCAGTCTCAACCACAAATTCAAACCAGCACTCCACAATCACTTTTACCCCAATTAACACCCGCTGATGCTCAGTGGCTTTTTATATGTGATTGGCGTAACTGTCCCCGTAAGAAGTTCAAATCCCTTAGTGATTTGCAACATCATGTATGCACTTCTCATGCTCCCGATCACCTAGATCCTTCGGCAGAAATCTTTTGCCAATGGGGTGTAGGTCCCGGTCTATGTGATGGAATACCACGTAAGCGTTTTTCTCTTATGACCCATCTTATAGATCGACACCTGACAGTGGAATGTCTTAGATCAGCGATGCAGCGCAGAATTGCCACAGGTGCTCATAACATTGCCCCAGCTAAGCCCCCCGTTACGATTGTGCGCAACATTGAGTTGTCACAAAGGACAAACACTGCATCACCATCACTATCCACATCTTCGTCATCGTCCTCGCAGGCAACACCTACCGGTTCGTCGGCATTGCAAGCCATCAAAAGACATACCGCCGACTTTCTGAATTGCAAGGAACTAATGGATGAGAACGAAGGACCGGTAACCAAAAGCATTCGCTTAACAGCCGCCCTTATACTGCGTAACTTGGTTATCTATACCACAACCGCAAAGCGTAGCATTCGCCGTTATGaacctcatctggccaatattgcTCTCAGCAATGTCGAATCTAGTGGCACTATATCCAATATTTTATACGAGCTGAATAATTGA
Protein Sequence
MLLTEPVKTNNMHKVQQTDISLITSAPSNSAVPVQAPTTPLRSSRNQNRGDKNSDDRFERENNATATKGRNPPKPPDEFYKDLQQFHEKRGTTIRNIPRISGREVDLHRLYCVVTNRGGFLKVNARDEWDDVLPELGWKEKIVNGSAGLKFIYRRFLEKYERVSFFGEDPEKIDAQEAAELAEMMGAGGSGRGGRGNSRYPSTLFGGGASTMNNIAMTYNYKQHHVNMDRRRQFKLSTDLHKSSPYEKLMLSLLSPLPNEQDFAINACTLMANESKHTLKVNEYPKLLDALLAHTGVYSDYSMRKLFQHIYNGVRHHSLYGFWYDLLHGHPQILELYTDEQTLMDSGVIDDWDDGKQGIEEGIWYDSKEYDFLNLGRGLGTHDYVGQRVLQIVAILRNLSFIAENLPVLVKNKTLLRFLVMGSNIRWSNVHIQALEITGNIAAEIEMLDPTTDELSRCLMATICDGIDGPDRGVIINCLEILYKLCQREANEEYILKCLNEKFYNTIALFLSLNDIMLLLFTLEAIYALTCMGSKSCQSMMHVRGIVDQLISLITVEAQSYGPDGCILMRVVETVPGNMLPMVAQNIANLQNAAVMHKSTPHASIIHKQQIIPNPNIMSDVVDSILPFHGASSVVTPVEHHHHNQQQHHSQSQQPQQPQPQNNPPPPPQMQMPPNFTQDDDQFALAWLGATFERANTECHIEQQELYRMYLSHCQKAGKQSVLNHMQFPKLMRLIFSSAVGPAIVRRSDGTELPGTYYISLRMRAQPLPMQQKSTLVTPGPSSPGGKQNDNNSPTRKIKKKLKDGNTLAATNVSSEGGASQPVVENAPKAIVAAVSPKPQIGVIETTNNQESSAMLPQPNVEIKCDEKMDIEEPAEAAKVEEHGSVQPVQPSQASDSLAASTEQSPQLNQAHPQHASQTSLIKSLLANKVNQRQQKQKDQTTANASTSTPSTSNIPCGSGLSTVASSPQPIKVASTAITALVSNPLMQNTPVKVGQTTIKPLNPTLSMEKKQTHISESTPPPLAPLSGANVAKDSSGRPILLANQMLVDILDKKMIEPPIPATIIQKRKVEDTSAQNKRMALDSSSINAKDSEVPVTPSKNAANLYAEMAASILEDEDLEELSAQQNNLMTEQPMQQHPPSLIIPAAKVQTAVQNVPRQLVFQHNQPSQLKVTQANSSAGQTTHPMPNAVATIKTDQGLQTVPVILHQKPLEATQHGQPQQIIQQVIQQQPAASQTQTTQYVLATNQQGQTYLVAQQTPQSQPVVQPPPPTQTVLVTQTPQQQSTGGKTIIILQQNSLPGPSGAPQQIITTTAPGQQQKMIMTTPQGQQVLLTQRPQTPQQIFINPQTGAATHIQHVPAQSRQIIQTTTTQTMPSVQQNSQLQTGQMSPSLLNQLNQIPATIKLHQPVAQVNTAIQPSQQNTVSRMSIGTKGVAIVQGHAANPPATPVAIPQLQQHQSIIQQHIISGPAEKRHVILGGGRAIEIKETLITQAQPPPQQCQLNSQTIITTQQPTQSTVATNIIQQHQQQQQQQQTQQQHLPQQQPQPQTQAAAVLTPKVSTVAATMTSPQTPALIAAVKTSETHTPTATPPPSLIQTSNQSNLKKSLTPSLPPTLIKPSLPTVKLPPGVGSGPPPLAAVNSNATTPTLIAKTAPHSAIEDKKEDSLVKVAPPPATSAPLHVPVVASNTLTATTQAACGNQTSNAASNTTASGNPQAATAPSAPQAPNTQSQPQIQTSTPQSLLPQLTPADAQWLFICDWRNCPRKKFKSLSDLQHHVCTSHAPDHLDPSAEIFCQWGVGPGLCDGIPRKRFSLMTHLIDRHLTVECLRSAMQRRIATGAHNIAPAKPPVTIVRNIELSQRTNTASPSLSTSSSSSSQATPTGSSALQAIKRHTADFLNCKELMDENEGPVTKSIRLTAALILRNLVIYTTTAKRSIRRYEPHLANIALSNVESSGTISNILYELNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-