Basic Information

Gene Symbol
tfcp2
Assembly
GCA_001015335.1
Location
NW:524466-588143[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.022 1.5e+02 1.1 2.8 90 143 31 85 23 103 0.73
2 3 2.1e-53 1.4e-49 168.0 0.1 13 188 401 573 389 579 0.90
3 3 1.4e-14 9.5e-11 41.0 0.3 183 222 632 671 628 672 0.92

Sequence Information

Coding Sequence
ATGGCTTTATCGGTTGTCGCCAACGCCACCCATCAACATCAGCCAAGTTTTTTCGATTTGCAATCTCTGTTTGATCCTTATTCGTTACAACAACACCATCAACAAGAATTCAAATTTGTTAATCAAcatcaccaccaacaacaacaacaacagcagcaacaattaGAACTGCAACAACAGCAGCTTCATAATAGTCATcacgaacaacaacaacacaacttgCAACATTCAAAATCTGGCAGATTCCATTTTACGGATTCAATGGATTTAAATAGCAGTCATATTAATCAtatcaacaataacaacagcaacaacgataACGATAACATATTACAGcaAACACAAATCAATCGTAATTTAATGAGTGGATTTCTTCATCAACATTTCGGAGCTGAATATGAACCTGTTATAACATTTGTTGATTCACCACCCAATTCTGAAGAATCTTGGCCGGAGGATCAGTCGAAAGGATCACCAGGACCACAAATAATAGACGTTCAGACTATCTACTCGAACGGGGGAGCACGTAAAAGACGAATGGATTGGGATCCATTGGATTTAGGTCAAAGCGAAAGCAATGCTTCTCCACCCAATGGCGAATTACCAGCCAAGCTATCAGCCCATCAATTAGCCGATCTAAAGGAtaaaggatataaaaaggagaaaTTAAGCAGTGGTCGTACCAATTGGACTGACGATATAGGATTTGATTTAAATGCCGAATTTAATAGTAATTCTTATTTGAACAATGAATCTTTCATGTCATTCTCATCGAGCTTACAACCAGTTCTCAAACAAGAACCGCAGACAGAGCAATTGAAGATTAACAATAAAACTACGCTACACAATATTCCAAGTCCTGTGAGTAGCGTTAGCATTCCAAAACATGATAAGCCATCGAATACGGTCAATAACAGTGTTCTCATCGATCCAACACCGTCTTCAGGCTCAACAGTAGTTTCATCGGTGACGTCCGAGAAACATAAGAGCGGTGTCGATTTGATTGATAATCATTGTGCATGTGGTTCCCCACAGGCTAACAATCATCAGCAGGTGGTGGAACAGAGCTCCGCAACGATCAAGGGAAACAATGCCAATACCGAACAAGCACGCCAACTGCTAACCGTAGTTGATGCCAGTAAAATAGAACAAAATCCCCTTGGACGTGCTGCATCTTCAACACCCATAGCAACAACAAATGCAGCCGTTGTCAATTCAGACGATTACAAGACTCTTTTGTCTTTATTCAGATTCCAATACATTTTGGCAGCTGCCACATCCATTGCTACAAAAAATAATGAGGACACCCTAACATATCTCAATCAGGGTCAGAGTTATGAaattaaattgaagaaaatcggtgACTTATCCATGTATAGGGATAAAATTCTTAAGAGTGTTATCAAGATATGCTTCCACGAGCGTCGTCTGCAGTACATGGAACGTGAACAAATGCAACAATGGCAGGCCTCACGTCCCGGCGAGCGTATTATTGAAGTTGACTTACCACTCTCCTATGGCCTGTGTCATGTATCTCAGCCATTAAATCCAAACTATTTGAATACGGTGGAGATCTTTTGGGATCCCATGAAGGAGGTCGGCGTTTACATAAAGGTTAACTGTATATCCACAGAGTTTACGCCAAAGAAACACGGTGGCGAAAAAGGTGTACCATTTCGTTTACAAATCGAGACATACTTAGAGAATAACAATCCAAATAGCAATAGTGCTAACGGTGGCAGCGGCGTTACAGGCGTTGGCGGCGCCGGCTCTGGCACCAAAACCCCACCCACAACAGTGGTGGCCCCATCCTCACCTTTGGGAGGTGCAGGCGGAGTTGTGGCCATAGGCTCACCTCATAGCCAAACGGGAAATTTGACTCCCAATAATTTGCTAAATTCAGCTGTCAAACAGCCCATACATGCTGCAGCCTGCCAAGTTAAGgtttttaaattaaaaggaGCTGACCGCAAACATAAACAAGATcgtgaaaaaatacaaaaacgtCCTCAATCGGAACAGGATAAATTTCAACCCAGCTACGAATGCACCATTATGACGGACATACCGCTTGATTTGATAACATCGACGCCAACCACCACAGCTGGTTGTTTCAGTCCCGAATATATGAAAATCTGGCCAAATTCACCAGTTCATATACCAAAATATGATGGCATTTTATCGTATGCAAGTGCTTCGCCAAATGCCAATGCCAGCCCCATAGCCATTAACAGTGTCTCCTCAACAAAttctccaaatttgaaaatcatGGATGCCAATATGGTGGCCGCACCGGTTATGGCCACCGATACCGATGACTATAATTCAATAAACATAATGCCCGAATCAACACCGGTGCAAGTAACCCAATGGTTAACATATCATCGCCTAACGGCTTATTTATCAACATTTGCCCAATTTTCAGGTGCCGACATAATGAGaatgtCTAAAGAGGACTTAATACAAATTTGTGGTCTTGCCGATGGTATACGCATGTTTAACATTTTAAGAGCAAAGGCCATAACACCCCGTTTAACGCTCTATGTTAGCTTGGATGGCAGCAGTTACAATGCCATTTATCTCATATCCAATACTGCTAAGGAGTTATtgcaaaaacttttcaaattacCTGGCTTCTATGAATGCGTAGCCAAAAGTTCCAATTCTTTGAATGGTAATGCCGGTGGTGGAGGAGGTCTCATGGATAATTCATCACCCTACCATAGCTGGGGTATGCATTCCAAATACTCGGGTTCCGGTTCCAGCATTTTTAATGATGTCAATAACAAAAGTTTAATTTATATAACTGGGCCATCGGGTATTCATGTTGCCATAACCGATGAGGTTCTAACAAATGAAATCAAGGATGGTAGTCTATATGGTCTGGAAGTACAAAATGGAAAAGTCATTATGAAATTGATGAACAAAAATGAaaactga
Protein Sequence
MALSVVANATHQHQPSFFDLQSLFDPYSLQQHHQQEFKFVNQHHHQQQQQQQQQLELQQQQLHNSHHEQQQHNLQHSKSGRFHFTDSMDLNSSHINHINNNNSNNDNDNILQQTQINRNLMSGFLHQHFGAEYEPVITFVDSPPNSEESWPEDQSKGSPGPQIIDVQTIYSNGGARKRRMDWDPLDLGQSESNASPPNGELPAKLSAHQLADLKDKGYKKEKLSSGRTNWTDDIGFDLNAEFNSNSYLNNESFMSFSSSLQPVLKQEPQTEQLKINNKTTLHNIPSPVSSVSIPKHDKPSNTVNNSVLIDPTPSSGSTVVSSVTSEKHKSGVDLIDNHCACGSPQANNHQQVVEQSSATIKGNNANTEQARQLLTVVDASKIEQNPLGRAASSTPIATTNAAVVNSDDYKTLLSLFRFQYILAAATSIATKNNEDTLTYLNQGQSYEIKLKKIGDLSMYRDKILKSVIKICFHERRLQYMEREQMQQWQASRPGERIIEVDLPLSYGLCHVSQPLNPNYLNTVEIFWDPMKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYLENNNPNSNSANGGSGVTGVGGAGSGTKTPPTTVVAPSSPLGGAGGVVAIGSPHSQTGNLTPNNLLNSAVKQPIHAAACQVKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMTDIPLDLITSTPTTTAGCFSPEYMKIWPNSPVHIPKYDGILSYASASPNANASPIAINSVSSTNSPNLKIMDANMVAAPVMATDTDDYNSINIMPESTPVQVTQWLTYHRLTAYLSTFAQFSGADIMRMSKEDLIQICGLADGIRMFNILRAKAITPRLTLYVSLDGSSYNAIYLISNTAKELLQKLFKLPGFYECVAKSSNSLNGNAGGGGGLMDNSSPYHSWGMHSKYSGSGSSIFNDVNNKSLIYITGPSGIHVAITDEVLTNEIKDGSLYGLEVQNGKVIMKLMNKNEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00679241;
90% Identity
-
80% Identity
-