Slun001563.1
Basic Information
- Insect
- Stomorhina lunata
- Gene Symbol
- nfxl1
- Assembly
- GCA_933228635.1
- Location
- CAKOFY010000062.1:1496505-1499934[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 3 2.6e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 20 0.2 1.7e+03 -0.3 0.4 4 10 192 198 191 198 0.95 3 20 2.5e-08 0.00022 21.7 15.9 1 18 206 222 206 223 0.98 4 20 3 2.6e+04 -4.3 2.1 6 10 249 253 248 253 0.89 5 20 0.0007 6 7.5 14.6 3 19 261 278 259 278 0.91 6 20 1.7 1.5e+04 -3.3 0.9 6 10 303 307 302 307 0.86 7 20 6.1e-09 5.2e-05 23.7 12.5 1 19 313 331 313 331 0.99 8 20 1.3 1.1e+04 -2.9 0.5 1 8 356 362 355 363 0.50 9 20 4.8e-08 0.00041 20.8 10.9 1 18 366 383 366 384 0.96 10 20 0.47 4e+03 -1.5 0.4 1 5 393 397 393 402 0.75 11 20 3 2.6e+04 -5.0 2.3 5 10 407 412 407 412 0.91 12 20 0.00023 1.9 9.1 16.5 1 18 418 435 418 436 0.98 13 20 3.9e-10 3.4e-06 27.5 14.1 1 19 445 463 445 463 0.98 14 20 0.41 3.6e+03 -1.4 11.3 9 18 508 517 499 518 0.88 15 20 0.19 1.7e+03 -0.3 4.8 3 11 531 539 521 540 0.84 16 20 0.4 3.4e+03 -1.3 1.1 6 10 599 603 598 603 0.90 17 20 1.7e-05 0.15 12.6 5.5 1 11 609 619 609 620 0.96 18 20 0.0017 15 6.2 15.1 3 18 649 664 648 665 0.94 19 20 3 2.6e+04 -6.8 3.1 10 13 672 675 671 675 0.68 20 20 4.3e-07 0.0037 17.8 12.9 1 18 716 735 716 736 0.91
Sequence Information
- Coding Sequence
- ATGCTACCGACCAAGTCCAAACAACAAGCCACTGTTAAGAATCCAACAGAAAAATTCAACGAAACTCAAGCGAGAAACATTCAAGTGGCCAAGAAAATGGTGGAAAATTATGTCTCGTCTTCTGAAGATGAGGACGAGCTAGATGAAAAAACTATTTTAGATTCTCTTTATCAGCATTATAAGACGCGTAAAGAAGATCAACATTTATTGGCTAAAACAGCCGGCTTTTTGGAAAATGTTTTACAAACCGGCGCGGCAACATGTCTTATTTGTATTGGAAGTGTGAAGCGAACCAATGCCATATGGTCTTGTAAGTATTGCTATTGTTTTTTTCATTTGAACTGCATACGAAGATGGGCCAACGACAGCATGGCCCGGGCAAAAGCCGAGACACAAAATGAACAGGGCTACTATAATCATATGGGTGAATATGTGCCACCTAAAAAATCAAAGGCTGTGGAATGGTGTTGTCCTCAGTGTAGAAAAGCATATCAACCCGCAGAAAGACCCGAGGAATACGAATGCTTTTGTAGCAAGGAAATAAATCCAGTCTCTCAACCCTGGCTAGTTCCTCACTCCTGTGGTGAGATATGTGGCAAATCTTTGCAGCCAAATTGTGGACACAAATGCACATTACTCTGTCACCCTGGACCTTGTCCACCCTGTGTCCAGTATGCCGTTACTTCATGTAAATGTGGAAAATCTTCTCCAAAATCTGTACGTTGCATTGAAAAGTTATGGGAATGTGAGAAGAAATGTAATTTGCTTCTGTCATGTAAAGAACACATTTGCAAAGCCTCGTGTCATAAACCCGGTCAGTGTCCACCATGTCAGCAAACAAGTATGCAGCCGTGTGAATGTGGCAGAGAGACCGCAAAACGCAAATGCTGTGAACAAAAGTGGCATTGCAAGAAACCTTGCGGCAAGTCATTTTCTTGTGGATTGCATACTTGTAAGAATGTCTGTCACTCCGGTGCTTGTGGTGATTGCCCTTTAAGTTTGCCGCGCCACTGTCCCTGTGGTAAAACTAAAAAAGTGGGCCCTTGCTCTGAAGTTATAGATACCTGTGGGGATACTTGCCAAAAGGTATTAGCTTGTGGTTTACACACTTGTACTCAACGCTGTCACAAAGGAAACTGTAATTTGTGTCTGGTTACAACCAAAAAAAGATGCCGCTGTGGTATGCACGAAAAAGAACTGCCCTGTTCCAAAGAGTTTACATGCGAAACTAAGTGTAAGCAAGTGCGAGATTGTGGCAAACATCCATGTAATCGCAAGTGCTGCGATAGAAACTGTCCGCCCTGTGACAAAGTGTGCGGCAAACCTTTGTCTTGTGGTAAACATAAATGTCAGTCGATTTGTCATCGGGGTCCCTGTTATCCGTGCCAGCAAAAGTCTCAAATCAATTGCCGCTGTGGTAAAAGTAAAAAGAGTATACCTTGCGGTCGGGAGCGTACTGCAAGAGTCGTTTGTTTGGAACCATGTCGTATACCTTCAAAATGTCACCATGAAAATAAACATCGTTGTCATAAAAACGAATGTCCACCTTGTGGTCAACCGTGTGGTTTGCCAAATGACACCACCAAGTGCGAACACTTGTGTATGTCAAAATGTCATGCTGCAGTTAAAGTAGCTAAGAAATCAAATCCGGATACTACCAGCGTATGGGAGCCTACTAAACAGTTCGAATTTAAAAAACAACCACATCCGCGTTGTGAAGCAAAAGTAAAAGTAACTTGTATAGGTGGACACGAAGAGGCAGAATGGCCTTGTTGGAATTCGAAACCAACATCCTGTCAGCGTGTTTGCAATCGTTCCTTGCGTTGTGGCAATCATAAATGTACTTTAATTTGTCATGCCGTAGCGGACTTAAAAGATATGAAGCAACAATCTGGTTGTACATCTTGCCAAGAAGGTTGTAATATACCCCGACCTAAAGGCTGTATTCATAGATGTCCTAGACCATGTCATTTGCCGCCATGTAATCCTTGTAACGTTGCCATTAAGACCAAATGTCATTGTGGTTTAATGCCTATTATTTACAAATGCAACGATTATTACAATACGGAAGGTGGAGAAGGCGAAATATTGGAGAGACAAGAAAATTTGATGAGCTGCGGAAATCGTTGTTTAAAGAACTATCCTTGTGGTCACCGCTGCACAGCCAAATGTCATTCTGGTCCTTGTCCCTATCCCGAATCATGTCGCAAAAAACTGCGCATATACTGTGATTGTAAACGTTTAAAATCTGAAATCTCCTGCGACAAACATCGTGCTGGTCTTCAAACCTTACAATGCGATGAAAATTGTGTAAAAACACAAAAAGCTCTTGAACAGACTCGCCAAAACGAAGAAGACTTGCGGCGAAAACAAGAAGAGGAACGTAATCGTTTGGAAGTGGTAGAATTTGAAAAGAAATTTAATAAACGTAAGAATAAAAGAAATTGTATGGAAAAGGAAGATGAATTACGGCGTAAAACTAAAGAAGGTAGACAAAATAATCCCATAAACTGGAAATTAGTTGGATTGTATGCTGGAATTGTAGCAGCTATATTATTAGCAGTTGCTTTAGCTTTTTATGAGGAACATTAA
- Protein Sequence
- MLPTKSKQQATVKNPTEKFNETQARNIQVAKKMVENYVSSSEDEDELDEKTILDSLYQHYKTRKEDQHLLAKTAGFLENVLQTGAATCLICIGSVKRTNAIWSCKYCYCFFHLNCIRRWANDSMARAKAETQNEQGYYNHMGEYVPPKKSKAVEWCCPQCRKAYQPAERPEEYECFCSKEINPVSQPWLVPHSCGEICGKSLQPNCGHKCTLLCHPGPCPPCVQYAVTSCKCGKSSPKSVRCIEKLWECEKKCNLLLSCKEHICKASCHKPGQCPPCQQTSMQPCECGRETAKRKCCEQKWHCKKPCGKSFSCGLHTCKNVCHSGACGDCPLSLPRHCPCGKTKKVGPCSEVIDTCGDTCQKVLACGLHTCTQRCHKGNCNLCLVTTKKRCRCGMHEKELPCSKEFTCETKCKQVRDCGKHPCNRKCCDRNCPPCDKVCGKPLSCGKHKCQSICHRGPCYPCQQKSQINCRCGKSKKSIPCGRERTARVVCLEPCRIPSKCHHENKHRCHKNECPPCGQPCGLPNDTTKCEHLCMSKCHAAVKVAKKSNPDTTSVWEPTKQFEFKKQPHPRCEAKVKVTCIGGHEEAEWPCWNSKPTSCQRVCNRSLRCGNHKCTLICHAVADLKDMKQQSGCTSCQEGCNIPRPKGCIHRCPRPCHLPPCNPCNVAIKTKCHCGLMPIIYKCNDYYNTEGGEGEILERQENLMSCGNRCLKNYPCGHRCTAKCHSGPCPYPESCRKKLRIYCDCKRLKSEISCDKHRAGLQTLQCDENCVKTQKALEQTRQNEEDLRRKQEEERNRLEVVEFEKKFNKRKNKRNCMEKEDELRRKTKEGRQNNPINWKLVGLYAGIVAAILLAVALAFYEEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313435;
- 90% Identity
- -
- 80% Identity
- -