Basic Information

Insect: Stomorhina lunata
Gene Symbol: -
Assembly: GCA_933228635.1
Location: CAKOFY010000014.1:581361-584074[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0011 0.076 14.0 0.9 2 23 247 268 246 268 0.96

2 10 5.6 3.8e+02 2.4 4.1 1 23 273 295 273 295 0.95

3 10 8.4e-05 0.0057 17.6 3.4 1 23 301 324 301 324 0.96

4 10 0.00048 0.033 15.2 0.2 3 23 332 352 330 352 0.96

5 10 0.00035 0.024 15.6 4.7 1 23 358 380 358 381 0.96

6 10 1.8e-05 0.0012 19.6 1.9 2 23 403 424 402 424 0.97

7 10 1.9e-05 0.0013 19.6 1.4 1 23 430 452 430 452 0.99

8 10 0.00012 0.0078 17.1 1.9 1 23 458 480 458 480 0.97

9 10 4.4e-06 0.0003 21.6 0.6 1 23 487 509 487 509 0.98

10 10 0.0015 0.1 13.6 0.4 1 23 515 538 515 538 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0011	0.076	14.0	0.9	2	23	247	268	246	268	0.96
2	10	5.6	3.8e+02	2.4	4.1	1	23	273	295	273	295	0.95
3	10	8.4e-05	0.0057	17.6	3.4	1	23	301	324	301	324	0.96
4	10	0.00048	0.033	15.2	0.2	3	23	332	352	330	352	0.96
5	10	0.00035	0.024	15.6	4.7	1	23	358	380	358	381	0.96
6	10	1.8e-05	0.0012	19.6	1.9	2	23	403	424	402	424	0.97
7	10	1.9e-05	0.0013	19.6	1.4	1	23	430	452	430	452	0.99
8	10	0.00012	0.0078	17.1	1.9	1	23	458	480	458	480	0.97
9	10	4.4e-06	0.0003	21.6	0.6	1	23	487	509	487	509	0.98
10	10	0.0015	0.1	13.6	0.4	1	23	515	538	515	538	0.96

Sequence Information

Coding Sequence: ATGGATTTTAATATTTGTAGAATTTGTGGTGATGGCGGCAAAAACTTAAAAATAATTTTAGATAATAACAAAGAAATGGTTGACAAATTGCTGCTGTGTGCCAATATAAAGATATGTCCTGGCGATATGCTTCCTAAACTCATATGTGTGGAATGTGAAAAAAATCTTGAACTTTCTTACCGCCTGAGAAAACAAAGCGATGAGACTCAAAAGCGTTTGAGACAGGAGATGTTAATGACTGTTAATTCCAACAATACAAACAATAAACAATTGGAACAAAACCTTTGTCCCGATTTTGAAGAAAGTTGTAAAGATACGCTCATACAGCAAAATTGTTTGTCTATGGAAAAAGGGGAGATTGTTTGTGTAGATTCAGAAAATGATACAATTACAAGGAGAGGAACAGAATTAGACGCCGACTTTGACACAACCGAAGAAATCGTTGAAAAATCAAAGATCTGCAACTCTAACGTCATTATGATTGAAGACGACAGCTCCATTGAATATACAGAAAGCAGTGATGACTTCAGAGATACAATTGAAAATACTACTGCTGAGCACTTGGAAGATAATGATACCAGCGACAATTATATAGACTTGGCTTACAACAAAACTCCCGAAAACCATGTTATTTCCGAACAATGTAGCATTGATATACTATCATCCAGTCGTGAGTCCCTAAATACTCATTTAGCAAATATACATTGTAATGAAGCAGTCAGTACTGTCAGTCACCTTACATGTGATACTTGTCATGAAGTCTTTAGTGAAAGGGCAGAGTATAGTTCACACATAAAACAACACGGAGATGAACGCTACCAATGTATCCAATGTTGTAAATTCTTTCCTACACTATTTCGTTTGAAACGACACGAAGAGACTCACAATGAGGTACCATTTCATCAGTGCTCCTATTGTAAGAGAAGTTACCGTGCACTATATAATCTTAAACGTCATATAGAGTCGTCTCATTTAGGGAAGAAAAGTTGGGATTGTAGCATTTGCAATGTTAGTTTTTCCCGAGCCGATATATTAAAGCGTCATTTACAGCTACATTCTGAAGAAAAAAATTACAAATGTTCATTATGTTCCCAGAGTTTTAAAACAAGAGATTATTTATATGCGCACAATAAGTCTCATCATAACCCAAATGCTGGCATACCCAAAAGAAATAACAACAACAAAAAATATTCCTCCAGTAAAAATCAATGTGGTCACTGTGGTAAAGTGTTCAATTCATCATTTTCTTATAAAAATCATCTTCTTATTCATACAAATGAAAAACCTTACGAATGTGAAACGTGTCATAAAAAATATCGTACGCTCGCTGCCCTGTCCATACATCAGCGCATTCATGATGACTATCGGCCATACCAGTGTGATGTGTGCCTAAAAAGTTTCCGACAAACAGCTCATTTAAACGAACACAAACTTTTACACTCAACCAATGAGCGACAGCATACTTGCACTATCTGTCAAGCTGCCTTTGCTAAAAAGGGGAATTTAAAAGCACATTTACGTATCCATACAAAAGAAAAACCTTTTAAATGTGCAGATTGTTCCGCGGAGTTTAACTATTTGTATTTGCTTCAGAGACATGCAAGTAAAGTTCACAATAGAAGTGCTCAAAAAGTTTACACTATAAATGATACCGATAAAACCCTTGAACCCTATAATGCGAACGGTACTTTGGAATCTGAAGAACATATTGAGATGGAAGAGTGTGATGAAGAACCCATTGTATCAGATGTTGATTTTATTGAAAATAATGAGGAAACATATATATCGTCTGATGAAGAGTTAAATGAAAATGCTTATAATGACTTCACTCAAATATCAGAACATAAAGCTGAGCTTTTTGTTACAGAAGAAACTAAGTTAATTAGTTCCGTTTATGATAGTGTCAACAAATTGGAATAA
Protein Sequence: MDFNICRICGDGGKNLKIILDNNKEMVDKLLLCANIKICPGDMLPKLICVECEKNLELSYRLRKQSDETQKRLRQEMLMTVNSNNTNNKQLEQNLCPDFEESCKDTLIQQNCLSMEKGEIVCVDSENDTITRRGTELDADFDTTEEIVEKSKICNSNVIMIEDDSSIEYTESSDDFRDTIENTTAEHLEDNDTSDNYIDLAYNKTPENHVISEQCSIDILSSSRESLNTHLANIHCNEAVSTVSHLTCDTCHEVFSERAEYSSHIKQHGDERYQCIQCCKFFPTLFRLKRHEETHNEVPFHQCSYCKRSYRALYNLKRHIESSHLGKKSWDCSICNVSFSRADILKRHLQLHSEEKNYKCSLCSQSFKTRDYLYAHNKSHHNPNAGIPKRNNNNKKYSSSKNQCGHCGKVFNSSFSYKNHLLIHTNEKPYECETCHKKYRTLAALSIHQRIHDDYRPYQCDVCLKSFRQTAHLNEHKLLHSTNERQHTCTICQAAFAKKGNLKAHLRIHTKEKPFKCADCSAEFNYLYLLQRHASKVHNRSAQKVYTINDTDKTLEPYNANGTLESEEHIEMEECDEEPIVSDVDFIENNEETYISSDEELNENAYNDFTQISEHKAELFVTEETKLISSVYDSVNKLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -