Basic Information

Insect: Stomorhina lunata
Gene Symbol: -
Assembly: GCA_933228635.1
Location: CAKOFY010000005.1:148514-155917[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.6e-05 0.0011 19.8 0.7 2 23 162 183 161 183 0.97

2 18 8e-05 0.0054 17.6 1.1 2 23 196 217 195 217 0.98

3 18 2.7 1.8e+02 3.4 0.8 3 23 225 244 224 244 0.95

4 18 0.09 6.1 8.0 0.4 1 15 250 264 250 268 0.87

5 18 0.00045 0.031 15.2 0.4 3 21 280 298 278 299 0.94

6 18 1.1 74 4.6 0.1 2 19 386 403 386 403 0.95

7 18 0.24 16 6.7 4.2 1 23 520 543 520 543 0.97

8 18 0.00047 0.032 15.2 5.7 2 23 554 575 553 575 0.97

9 18 0.76 52 5.1 1.0 2 23 582 602 581 602 0.96

10 18 0.014 0.92 10.6 0.2 1 23 608 630 608 630 0.96

11 18 4.7e-06 0.00032 21.5 0.9 1 23 636 658 636 658 0.98

12 18 0.011 0.72 10.9 4.2 2 23 772 794 771 794 0.97

13 18 0.00028 0.019 15.9 0.3 1 23 865 888 865 888 0.92

14 18 0.00032 0.021 15.7 3.5 1 23 897 920 897 920 0.98

15 18 0.086 5.8 8.1 0.6 1 23 925 947 925 947 0.91

16 18 1.4 92 4.3 0.0 1 15 953 967 953 975 0.74

17 18 9.7e-05 0.0065 17.4 6.3 1 23 981 1003 981 1003 0.98

18 18 0.99 67 4.7 0.8 3 16 1008 1021 1006 1022 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.6e-05	0.0011	19.8	0.7	2	23	162	183	161	183	0.97
2	18	8e-05	0.0054	17.6	1.1	2	23	196	217	195	217	0.98
3	18	2.7	1.8e+02	3.4	0.8	3	23	225	244	224	244	0.95
4	18	0.09	6.1	8.0	0.4	1	15	250	264	250	268	0.87
5	18	0.00045	0.031	15.2	0.4	3	21	280	298	278	299	0.94
6	18	1.1	74	4.6	0.1	2	19	386	403	386	403	0.95
7	18	0.24	16	6.7	4.2	1	23	520	543	520	543	0.97
8	18	0.00047	0.032	15.2	5.7	2	23	554	575	553	575	0.97
9	18	0.76	52	5.1	1.0	2	23	582	602	581	602	0.96
10	18	0.014	0.92	10.6	0.2	1	23	608	630	608	630	0.96
11	18	4.7e-06	0.00032	21.5	0.9	1	23	636	658	636	658	0.98
12	18	0.011	0.72	10.9	4.2	2	23	772	794	771	794	0.97
13	18	0.00028	0.019	15.9	0.3	1	23	865	888	865	888	0.92
14	18	0.00032	0.021	15.7	3.5	1	23	897	920	897	920	0.98
15	18	0.086	5.8	8.1	0.6	1	23	925	947	925	947	0.91
16	18	1.4	92	4.3	0.0	1	15	953	967	953	975	0.74
17	18	9.7e-05	0.0065	17.4	6.3	1	23	981	1003	981	1003	0.98
18	18	0.99	67	4.7	0.8	3	16	1008	1021	1006	1022	0.90

Sequence Information

Coding Sequence: ATGGACAACCCTTTCCATATAACCTCTATAAAACATGATCAATTTTTCACCATAACCTCTATAAAACACGATCCCGAACAGCAGAAACAACAAGAAAACTCATTATTAACAAAATCATTGGAATACCATAAAGAGGAAATCAATCATGTAGTTAATTCAAACAATGATGTCATCACTAAAACCAGGGCAGAAACTTTTGACTTTGGTGAATCGGATAATGGGGATTTTTCTGATTCCGGAACTAGCTATTCACCAGAAGCACACGAGAGTGATGATGAAGACGATGAAGGGTGTGAAGATAATAATGACTCAGATGTTGCATCGACTAGTGGCACTCAAAAACAAAAAACTGCTGATGAATATAAAAAAGTGATAAAATGTGACGAGCTTATGTCCAAATGTCCATTTTGTAATATTGGCCATAGAAGCAAAACTGAAACATTACAACATGTACGTGAGGTTCATCTCAGAAATTTACCCATAAAATGTCGTATTTGCGGTATATGTTTCAAAACCAATGCTGGCCTATCTGCTCATCAAAAAGTCCACAACAATAGTGAAGTTCAGGGCAAAACTTTATCCAAAAAATGTCCTATTTGTGGTAAATGTTATCAAACCGATGCTGGCCTGTCAGCTCACACAAGAACCCACAGCGAAGGCCAGTTGTTGTTGTGCCCAATATGTAATATACACATTAAGAAGGTTTATTACATTAATCATATGTTAAAGCACGAAAGTATTAATTGTTTTCCTTGTCAAGTGTGTGGACAGATTTTTAAAACCAAAGAAGAACATATGACACATTGCAAGAGTCTTATCAAGGAAAAACCATATGGCTGTGAAATATGTTATAGGCGTTTTAAACGAGCAGATGATCTAAAGCATCACTTAGAATCATATAAATTATATAGCTGTGCATTTTGTTCGGTCAAATTCAATTCAGCTGCAATTCAAAAACCACCCTATGCCTGTTCCAAGTGTCAAAAAATTCCAGATATAAATAAAGTAGAAAATCAGTGTTCGTTAACAAACAGTACTAATGTATTGGTTTCGGTTAAGAATGAATTTGATGAGCAAATAAATGATAAAACACATTATAAAGTCGTAGAAAATGAAGCCTCTACGTCTAAGGGAATCTCAGAGTTATCCTCAAATCGATGTAAACAATGCGAAGGAGTATTCGCAACCAAAAGAGGCTTAGTACTACACGATATTTCAACTCCAACAAATTTCCCAAGCTTTGATAACACCCAAAACAAAGAATTCTTCACTATAACTTCTATCGGACAAGCGCAGCAGCTGCCAATTGTAAATCCACCATTAACAACAACTTTGCAAACTCATGACCAAGAAATTGTCCAAGTGGTTTATCTTAACAATGATACAATCAATGGACTCAAACCCGAAACTATTAATATCGAAGAAACGGACGATGAAAATTATCTAACTATTTCTGATACTGATGACGATTTTGACGAAGAAGATGATGAGAATGTTTCATATCTGGCTTCGACTAGTGCCAATGTAAAACAAACAACAAAAGATGAACCACAACTTTACAGATGTCCATACTGTCATCTTAGCCAAAAAGATAAATATGAAACTTTCAAACATATAGAAAAATTTCATCCCAGTAAAAACAGGAAAATGTTAACAAAAAAATGCAAGACTTGTGGCAAATGTTTCAGAAGTGATTACAGCTTAAAAGTCCATAAAAAACTGCACACAGAGAAAATCCTTAAGAAATGTAAAATCTGTAGCATAAAAATTATGAAAAGTAATTACATTAATCACATACTAAAGCACGAAAGCCACGACTGTTTTCCATGTCAGGTATGTGGAAAAATCTTAAAAACAAACGAGGAACGTATTGCACATTCCAAGAATCACATTGAAGAAAATCCTTTTGTTTGTGACATTTGCTTAAGACGCTTTAAACGGAAAAGTGATCTAGAGAGTCACCTAATGTCACACAAGCAATATAGCTGCTCCTTTTGTCCAGCTAAATTTAATACGATAAATAGACAAAAGTCACCCTATGCTTGTCCTTTGTGTCGAAAAGTACCGGATATAATGAAAGAAGTGGAACGCCAGCATAATCTGGCAAATATTTATCATGTATTTGATTCTGATCGGAACTTGACGGCTCCCTCAAACGACAAGCAATTTACACCGTGTACGGAATTCGCAGAAGCCCAACAACAAAATAATGCTTTCGAATATTTCATAGTTAATGAAGTGGATGATCATATGATAAATGAAGATTCAGAATTAAATGAAGGCGAACAGGGACCGGCACAAATAAATTCAAATAAATGTCATGTTTGCTATAGAGGATTTAAAACGAAAAAAAAGATGTTAAAACATGTACAACGAGTACACGGTCCTGAAAGGGAACATCAAAGATTGTTGTTGTCAGATATGCGAGTAGATGAGGATGTAGAAGATGAATTCATTTCTGTTACCGACAATCCTAACGACACTGAAAACTCTCTTGAAACCTATATTATCTCCGATTCGGATGAGGCTGATACTACATCAAAAACTAGATGTACTTCAGAACTAGCTAAACAAAAAAACCCCACAAAACTTTATAAGTGTAAATATTGCGACAAAGTTGCCAAAAGTAAATCGGGATTAGGCAAACATGTAGGCATATTGCATAGCGATAAATGTGATATTTACAAATATAATTGTACCATGTGCAATCGTGGTTTTCATACTCATTCCGGCTTAATTTTGCACATAAGAACCTCACACGAAGGTCTTCAATTTAAATGTCCTCTCTGTCCGGTAAAGAGATTTCGTGAAAGCGTCTTTCTTACACATTTGATGACACACGAAAGTGACACTTGCTTTCCGTGCCCGGTGTGCGGGCAATTATTTGCCAGTGGTAACGAACGTGCCCTGCATTGGGATGGTCATGCCACTGAACGTCCTTTTGTTTGTAAATATTGTAGCAAGCGTTTTTCAAAAGAATATATGTTAAAACATCACCTGAAGAGACACAATCAATATGGCTGTAATTTTTGCTCGAAATCCTTTGTTTCAGAGAAAACTTTAAATCCGCCCTATGCTTGTAGAAAATGTGAAATGGATCCCGATATAAAGCGTCAAGTAGAACTGCAAAAACTGATGAAAAATCGACAAGTATTTGAATCGGATGAGGACGAAGGAGATGAGCGGCAAGAAATTTTAATCTAA
Protein Sequence: MDNPFHITSIKHDQFFTITSIKHDPEQQKQQENSLLTKSLEYHKEEINHVVNSNNDVITKTRAETFDFGESDNGDFSDSGTSYSPEAHESDDEDDEGCEDNNDSDVASTSGTQKQKTADEYKKVIKCDELMSKCPFCNIGHRSKTETLQHVREVHLRNLPIKCRICGICFKTNAGLSAHQKVHNNSEVQGKTLSKKCPICGKCYQTDAGLSAHTRTHSEGQLLLCPICNIHIKKVYYINHMLKHESINCFPCQVCGQIFKTKEEHMTHCKSLIKEKPYGCEICYRRFKRADDLKHHLESYKLYSCAFCSVKFNSAAIQKPPYACSKCQKIPDINKVENQCSLTNSTNVLVSVKNEFDEQINDKTHYKVVENEASTSKGISELSSNRCKQCEGVFATKRGLVLHDISTPTNFPSFDNTQNKEFFTITSIGQAQQLPIVNPPLTTTLQTHDQEIVQVVYLNNDTINGLKPETINIEETDDENYLTISDTDDDFDEEDDENVSYLASTSANVKQTTKDEPQLYRCPYCHLSQKDKYETFKHIEKFHPSKNRKMLTKKCKTCGKCFRSDYSLKVHKKLHTEKILKKCKICSIKIMKSNYINHILKHESHDCFPCQVCGKILKTNEERIAHSKNHIEENPFVCDICLRRFKRKSDLESHLMSHKQYSCSFCPAKFNTINRQKSPYACPLCRKVPDIMKEVERQHNLANIYHVFDSDRNLTAPSNDKQFTPCTEFAEAQQQNNAFEYFIVNEVDDHMINEDSELNEGEQGPAQINSNKCHVCYRGFKTKKKMLKHVQRVHGPEREHQRLLLSDMRVDEDVEDEFISVTDNPNDTENSLETYIISDSDEADTTSKTRCTSELAKQKNPTKLYKCKYCDKVAKSKSGLGKHVGILHSDKCDIYKYNCTMCNRGFHTHSGLILHIRTSHEGLQFKCPLCPVKRFRESVFLTHLMTHESDTCFPCPVCGQLFASGNERALHWDGHATERPFVCKYCSKRFSKEYMLKHHLKRHNQYGCNFCSKSFVSEKTLNPPYACRKCEMDPDIKRQVELQKLMKNRQVFESDEDEGDERQEILI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -