Slun024135.1
Basic Information
- Insect
- Stomorhina lunata
- Gene Symbol
- hang
- Assembly
- GCA_933228635.1
- Location
- CAKOFY010003943.1:76992-92448[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.17 11 7.2 1.3 3 23 221 242 220 242 0.92 2 19 0.32 22 6.3 3.4 3 22 345 364 343 364 0.90 3 19 0.006 0.41 11.7 1.1 1 22 439 460 439 462 0.90 4 19 0.69 47 5.2 0.5 2 23 502 524 501 524 0.93 5 19 0.0015 0.1 13.6 0.2 3 23 581 602 580 602 0.96 6 19 4.1e-05 0.0028 18.5 0.1 1 23 610 633 610 633 0.96 7 19 0.00017 0.011 16.6 0.1 2 23 723 744 723 744 0.97 8 19 0.0013 0.087 13.8 2.7 2 23 794 816 793 816 0.95 9 19 0.0052 0.35 11.9 0.2 2 23 825 847 824 847 0.95 10 19 0.0036 0.24 12.4 0.1 1 23 860 883 860 883 0.95 11 19 0.00016 0.011 16.7 1.1 1 23 943 965 943 965 0.99 12 19 0.0025 0.17 12.9 0.9 1 23 973 996 973 996 0.96 13 19 0.054 3.6 8.7 0.1 2 20 1004 1022 1003 1022 0.95 14 19 3.4e-05 0.0023 18.8 0.4 3 23 1090 1110 1089 1110 0.98 15 19 0.00052 0.035 15.1 0.4 1 23 1145 1167 1145 1167 0.97 16 19 0.00048 0.032 15.2 0.9 2 23 1261 1283 1260 1283 0.91 17 19 1.2 84 4.4 0.1 3 19 1304 1320 1303 1322 0.93 18 19 0.14 9.1 7.5 0.9 3 23 1338 1358 1338 1358 0.97 19 19 0.00075 0.051 14.6 0.7 1 23 1594 1616 1594 1616 0.98
Sequence Information
- Coding Sequence
- ATGATAACTAATATAAATGACTTGAATAGTTTTGAGGTAATGCTACATTCTTCCAGGGCCTTTAGAGCAGCCTGGCATTCGACGAAGATTGTCAACTCACTATTTTCCATGAATGTTATTTCCAGTCATGATAACCTGTCATTACGCATTTGCCACGCCTGTATAAGCTACCTAAACTCCTGGCAATCATTTAAAAATCGTTGTGTTTCAGCACAATCAAAACAACGTTCCTGGCTAGAAGAAACGTTCAACAAATCAATACATTCAGCTGAACAGCAACAACACCATCATCAAGCAGCAGATAATCATTACGATGATCATCACCAACAACAGCCAGATGAACAGTCTTTGGCCTCTTCCATATTGGAGGGAATATCAACGTTAAAAAAACGCAAATCTTTAACAGTCTATCCGTTACCTGCAGTACAAATAAAAGACGAACCGCTTGAAGCGGATGATGATTATAATCAAACCAAACAACATCATGATGAGTCGGATGAAATGGTAGTTGACCCAACCATGTTCTTAGAACGTACCGCTGATGAGGGTGATTTTTTGGAATCTACATCTAATTACGACTATGAAGTCATTAGACCACCTGCCGATCTCAAGGCATTGCCAGCTAGTACTACCATTCGCATGAGCACTAAAGAGGCTTCTTGTCGTGCTTGTAATTTGAAATTTTCCACACGAGCCAATGCCAGACGCCATGAAAAGAATTTACATCCTAATCTTTTCGAAACTCTCGAAGAGAATGATCAGACTGTCAACAGACAGACAGCAGCCTTGAATGCATCTTTAGAATTACAACGTGCCGTAGCTGCTGCTGTGGCAGCTGATGCCTGCAAACTTTCCAGTGGTGCCATTATAACACCTCAAAAGTACCGACAAGAAGTTGTGAATGCTTTTAATAATAGTGAATTTGGTTTTGATTATGATAACCCTGAGAAATATCGTGAACTGCTAACGGATGAGAAAATAGTTTTCCTACAACAAAACGACGAATTCCTAAGGCAATATCAAACGATGACTTGTCGTTGTTGTAACAAATACTATTCCACCTATAAGAATTTTATGGCACATATGCGTAAAAAGTACCTTACATTACCCCGAAATTGTTGCTTTAACTGCTTGAAGTTAAATGATTCCAAAGCCTTGTTTATATCACATTTGAAAAAGCGTAACTGTATAAATCTGCACAAGGTCTTACAAAACCTAATGGCAAGAAATGCAAACTTTGCTGCTGCTGTTACCGCTACAGTGGCTGCTGCTCCAGAAAAGGTACGGGCCAAAGAATTGTTGGTCAATAAAATGTACGAATGCAAACTTTGTCCCAAAACATTCCGCTTAAAATTGGAATTTCGTTCACATGTCTACGATGAACATGCCGATGTTCAGCGCAAAGATGTTAGCAATACCCAGTGTTGCTATTGCGCAGTGGATATTGATGATCCTGCCGATCGTAAACGCCATTACAACAATATGGATTGTATTGTCACGTTGCGTTGTGTCACATGCGATGCTAAGTATGAAACTCAACAAAAGTTCATGGAGCATGTACAGGAAAAACATTTGGCCAATTTTGGTGAACCGTCAAAATTCTTGTTAAGTGCTGATAATTCGCCGAGCAAAATAATGGGAGGTGCATCCTCCGCTGATGATTCACGTAGTGGACACTTCAATGTTTCGCTCATTAATACCACCCCGAAAACCCAATATTTCTCACGTATGCCACAGGCTTGTCCAATCTGTGGTCAACAATACAACAACTATAATAATGTATTGCGCCATATGGAATCTAAACATCCTGATCAATTACCACAAACCTATAAGTGTGTCAAGTGTGGACAAGGTTATCCAAGACTTTCTAATTTACGTGAACACATGGTTAGTGCTCATGGAGCTGATAAAGCTAGACACACAGGATTTGAGTATATTGTTAATGCCGATGCGGTCAAAAATGCAGCAGGATCGACAGCAGCGCCGCAAAACCCCTATACGGGACGTTATGATTATGTCATGAAGGATTTAATGTCTATAACAAATGGTGGGACAGTTGTTGATGATGATTGTGAAAGTGAAAATGCCCCTAAGAAAATACGTTTGGAATCGGGTATTTCTAATAATAATAACAATGGCACAGTAGTCACTAATGCTAGTCCCCGGGAGTGCTCTATTTGTAATGCTGTATTTGCTAATAACATAGGGCTTTCCAACCACATGCGTTCACATCAAAGTGCTCAAAATAATAATAACTTTGGTACAACATCTAAGACGGTAACGTCAGGAGGTAATACTGCACAACCAGCCATAAGTGGTCAGCAACAAATATTAAGAAAATCCCTGGAACAGGCAGCAGATAGACGTTTTAGACGTATGCGTTGTCGTATTTGCCAAAGGCGTTTCTCCTCCAAAAAATCCTATCGTTATCACATGCTGAATGACCATCAGATACGCAATGTACAGTTTATCAAATGTAAATTGTGTGATGCTGAATTTGCCTATGAAAAGGGTTTGAAAGTCCATATGTTTAAAATTCACAATACACTGCTAAAGGATGATATGATTATAAAACAATATGAATGTGAAATTTGTTCCATAGTCTATCGTACTGATGTTGAGTTACAACATCATTTAGCCAACGTCCACAATAAGCAAGGAGGACCTTCGAATATTGATGAAGACGATGATGCCTACCACGCCGATGATTCTGCAGTAGCCGGAGCAGTGGATAATAGTTCTGTGGCAGCTGATATGTCGGGCATTTCAACACCTGTTAGTAATGTGGGTGTTGGAGACAACAATCAAGCAGGTCCCTTGTACTGGTATCAATGTAAATATTGTCCCTCCAACTTTAATACAAACAAGAAGTTGGCTATACATATAAATTCACATGATGAATTCGATTCTAATGATTACTCATGTAAGGATTGTGGTAATGTCTATAGCGGACGTAAGAGTTTATGGGTCCATCGCTATAAGAAACATCCCCAAATACCCGAACCCTCGGAATGTGTGATGTGTAAAAAGGTATTCTTTGATGCCCCCATGTTGGAACATCATATACCCTCTTGCAATCGCAAACCGATCACCCAGTCAGGCAGTGAAGCAGCCATTGTAGCCACATATAAACATAAGACCGGAGACGATGAGGATGATGAAGATGATGAACACTCCCGTGATCCCGCCGACAATACTCCATCAAACACACTTAATGCTACCGCTAGCAGTGCAAGTAATATGAAAATAAAAATGCCCGAAGTTGCCTGCACAATGTGCGGTGCCCGCTTCACCGATCAGGATCTGTTCACTAAACATATACAAATGCATGAAATGGAATTGTATACGGACAATCCCTTGGCGGCCATGTTCGATACTGGTCCTGCCGATCCAAATCAATTCTATATGGATCGTATGAATGACAATGGCGAGTATGCATGCGATTTGTGTACAAAGATATTTTCACAAATGACAGCACTTAAAGTGCATAGGAAATGGCATTTCAGAGGTGATAGCAAACAGAACGAAGCCGATCAACATACATTGAGCAACAGCCACTCCAATACACAACACTCACAACTGCAGCAGCATCAACAAGTCAACAAAACCAACCAACAACATCAGCAGCCGCAACTCCAACAGCAACAACAGTCGAAATCCAAGATGCCGATCAACCATCAACATCTACTGGGATTACAAGCGGTGGGTCTAATGCCGCGTCAATTTGCCAATATGGGCGGCGGCAATCACAGTCGCCCTCAGAAACGTAAACGTGAACTTAAATGCCAGTACTGTCCCTCCACCTTTATCAGCAACAACAACTTAAGACGTCATTTGTTTGAGTTGCATAAAAATGAAATTGGCAATTTACCCGAACCACCGAGAATCGAATGTGATTCACCGAATATGTGTCGAAAATGTAATGTTAAATTTGAGACAAAAGCAGAATGGATTGAACACAAAGTGGCGGAGGCCAGGGTTATGAAACCATTTGGTCCATTCCAATGGGGCTGTGATTTGTGCGGAGCGTATGTGTCGCGTAAAGAAAAACTAATAAATCATTTACATAATCACATGAAAGAACAGGTGATAGTGCCAGTGGAACAACCAGAGCCCAGGACACAATCCCAACAAACATCTCACAATCCTAGGGAAAACAAAGAAACACAAGAGGAAGGCGGTGATGTCATGCCAGAGTTTAAAAAGATAAAAATTCCTTCCTTGAACTCAAAACAATCTGCAGCTGATGAAGAAGAATCAAGGGATAGTGTTAAAGATCAATATGATGAAGACGATGAGGAAGAAGAGGAAGATGATGAGGCAGAAGCTGAGGCTGAAGTTGAAACACAGCAGCAACAGCCACAACAAACAAACGAAGAGGAAGAATACGATGACGAAGACGAAGAAGAAGATGCTGTTGAAGAATTTGATGATTTGGCAGTAGGAGCTCAACAAACAGTAGGCGGAGATGAAGATGTAGAAGAGGATGATGATGACGATGAGGAGGAAGAAGATGATGATGATGACGACGATGACAGTAGTGATGCTGATGACGAGGATCCCTCCACTAACGAAGACACCAATGAGGCCTCTAGTCTTAAACGTAAAACCACAGAAATAGCCCAACCGCGCAGCTACAATGACACAGAAATTGAAGAGAATGACGATGTGGGTGAAGAAGATTCCGATGAATTCGATGACGATGAAGATGACAATTCTTCAACGGAAAATCGCAAACCTCAAGCCAGACTGGTCAGTAATGTTGTGGTAAAATCACGCTATTCCTGTGATCTCTGTCAGGTCTACTTTGATTCCCAGCAAGAATTGCAAAAACACGTTAAAATGCATTTCCTAAATGGACCCGGCTCAGTGACATTAACCGAAATTAAATCCTCCAAATCATCATCTTCAAACAAAAGTCGCAGCAGTAGTAGCGATGTTGTAGCCGTATAG
- Protein Sequence
- MITNINDLNSFEVMLHSSRAFRAAWHSTKIVNSLFSMNVISSHDNLSLRICHACISYLNSWQSFKNRCVSAQSKQRSWLEETFNKSIHSAEQQQHHHQAADNHYDDHHQQQPDEQSLASSILEGISTLKKRKSLTVYPLPAVQIKDEPLEADDDYNQTKQHHDESDEMVVDPTMFLERTADEGDFLESTSNYDYEVIRPPADLKALPASTTIRMSTKEASCRACNLKFSTRANARRHEKNLHPNLFETLEENDQTVNRQTAALNASLELQRAVAAAVAADACKLSSGAIITPQKYRQEVVNAFNNSEFGFDYDNPEKYRELLTDEKIVFLQQNDEFLRQYQTMTCRCCNKYYSTYKNFMAHMRKKYLTLPRNCCFNCLKLNDSKALFISHLKKRNCINLHKVLQNLMARNANFAAAVTATVAAAPEKVRAKELLVNKMYECKLCPKTFRLKLEFRSHVYDEHADVQRKDVSNTQCCYCAVDIDDPADRKRHYNNMDCIVTLRCVTCDAKYETQQKFMEHVQEKHLANFGEPSKFLLSADNSPSKIMGGASSADDSRSGHFNVSLINTTPKTQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGQGYPRLSNLREHMVSAHGADKARHTGFEYIVNADAVKNAAGSTAAPQNPYTGRYDYVMKDLMSITNGGTVVDDDCESENAPKKIRLESGISNNNNNGTVVTNASPRECSICNAVFANNIGLSNHMRSHQSAQNNNNFGTTSKTVTSGGNTAQPAISGQQQILRKSLEQAADRRFRRMRCRICQRRFSSKKSYRYHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDDMIIKQYECEICSIVYRTDVELQHHLANVHNKQGGPSNIDEDDDAYHADDSAVAGAVDNSSVAADMSGISTPVSNVGVGDNNQAGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQIPEPSECVMCKKVFFDAPMLEHHIPSCNRKPITQSGSEAAIVATYKHKTGDDEDDEDDEHSRDPADNTPSNTLNATASSASNMKIKMPEVACTMCGARFTDQDLFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYMDRMNDNGEYACDLCTKIFSQMTALKVHRKWHFRGDSKQNEADQHTLSNSHSNTQHSQLQQHQQVNKTNQQHQQPQLQQQQQSKSKMPINHQHLLGLQAVGLMPRQFANMGGGNHSRPQKRKRELKCQYCPSTFISNNNLRRHLFELHKNEIGNLPEPPRIECDSPNMCRKCNVKFETKAEWIEHKVAEARVMKPFGPFQWGCDLCGAYVSRKEKLINHLHNHMKEQVIVPVEQPEPRTQSQQTSHNPRENKETQEEGGDVMPEFKKIKIPSLNSKQSAADEEESRDSVKDQYDEDDEEEEEDDEAEAEAEVETQQQQPQQTNEEEEYDDEDEEEDAVEEFDDLAVGAQQTVGGDEDVEEDDDDDEEEEDDDDDDDDSSDADDEDPSTNEDTNEASSLKRKTTEIAQPRSYNDTEIEENDDVGEEDSDEFDDDEDDNSSTENRKPQARLVSNVVVKSRYSCDLCQVYFDSQQELQKHVKMHFLNGPGSVTLTEIKSSKSSSSNKSRSSSSDVVAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -