Slun000416.1
Basic Information
- Insect
- Stomorhina lunata
- Gene Symbol
- ZNF831
- Assembly
- GCA_933228635.1
- Location
- CAKOFY010000014.1:1789504-1798363[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.2 13 7.0 2.5 1 23 321 344 321 344 0.94 2 23 0.44 30 5.8 5.1 2 23 355 377 354 377 0.96 3 23 0.0094 0.63 11.1 1.1 2 23 399 420 398 420 0.96 4 23 0.0037 0.25 12.4 0.2 1 23 493 516 493 516 0.94 5 23 0.24 16 6.7 2.4 1 21 523 543 523 544 0.93 6 23 1.3 85 4.4 2.0 1 23 555 578 555 578 0.93 7 23 0.00099 0.067 14.2 1.5 1 23 614 636 614 636 0.97 8 23 0.019 1.3 10.2 0.3 3 21 664 682 662 683 0.93 9 23 4e-06 0.00027 21.7 4.6 1 23 728 751 728 751 0.98 10 23 0.17 12 7.1 1.9 1 23 788 811 788 811 0.96 11 23 0.072 4.9 8.3 0.7 2 23 888 909 887 909 0.91 12 23 0.00035 0.024 15.6 1.0 1 23 915 938 915 938 0.96 13 23 2.2e-05 0.0015 19.4 2.1 1 23 944 966 944 966 0.98 14 23 0.0013 0.089 13.8 0.2 1 22 971 992 971 995 0.91 15 23 0.0097 0.66 11.1 2.9 2 23 1033 1054 1032 1054 0.97 16 23 4.9e-05 0.0033 18.3 1.7 1 23 1060 1083 1060 1083 0.96 17 23 2.3e-05 0.0016 19.3 0.4 1 23 1089 1111 1089 1111 0.97 18 23 0.0026 0.18 12.9 0.0 1 23 1118 1142 1118 1142 0.91 19 23 0.0002 0.014 16.4 0.3 3 23 1157 1177 1156 1177 0.99 20 23 0.068 4.6 8.4 8.7 1 23 1183 1205 1183 1205 0.98 21 23 3.7e-05 0.0025 18.7 2.3 1 23 1211 1233 1211 1233 0.98 22 23 0.00036 0.024 15.6 4.2 1 23 1239 1261 1239 1261 0.99 23 23 0.017 1.1 10.3 2.2 1 23 1267 1290 1267 1290 0.97
Sequence Information
- Coding Sequence
- ATGAGCAGCTCTATTTCCCAAGATTGTTTTATAAATGGAGTTCAATACAAGTGCCGCACTTGCTTTGATCCGGGAGCGACAACTTTTCTACTAGCAAGTGAGTGCAGCGATACAAAAACTTGGCGTGATCTGTTAAGGGACATGGCGCAGCTACAGACCGAAGACAACGATTCGTTGCCAAAGACCGTATGCTGCAAGTGTTTGGATAAACTTATAAATTACTATGATTTCATACTTCAGATTCATAGTGTGAATAAGAAATATGAGGAATTACTAGGAAGTTGTAATGATCCACTTCAAGTTCAAATAAAAGACGAAATTATAACCGTGGAAGATGCAAATACGGACATACAAGAAATACCACTTCAGCAGCCAGTTTCCGAAATAAAATTAGAGCAAGAATTTATTGTTCCATATGACATAGTTACAGTTAAAAATTATGAAAGATGCCCAGAAAGTGTGGAAAATGAGGCTCTACATCCGTCTGAAGACATCAATATAACAAATGTGTCAAATTCGGATGGTATTGATGATAGCGTGAGTTTAAATGGAAACGATGATTTTTATGAATTTGAAAGCAGTTTGTTATCATCTGATGAAGACAATATTGATGATCAAAGTGAAGATTATCAATATCATGATATCAAAGGTCAAAGTATATATGAGCCACAAATGTCTATAATAGAGAAAACGGCCCAAACGTGCAACAAACCAAACAATCCTGACATTGGAAATAGTGATCCGTTCAAGAAGATTGAAGAAGTTAACGGTCGTTTTGATTGCCCTTTATGCACAAGTACATTTTTATTCCGAGAAAAGTGCATTGAACACATAATAACAGTTCACGCTTTACAACTCTCCAAAAACAAGGATGACAGCGAAAAAATGAACAAAGTACCAGTCGCAATAAAATCTAAAAAAGTCCCAGTCACAAATACAATAAAAAAAATTAACGATCGCTTTATGTGCCGTATATGTAAAGAAACATTTTCTTTGAAGAGTAGTTGTATCCAACATGTAAGCATGATGCACCAAAAACATGACCAAGAACAGAACCCGATTAAGTGTGATTTTTGTGAAAAAGAATTTCAATGTAGAGAATACTTGCAACGTCACTTAAGACATCTTCATTTGGATGATATTAGGAATGTAAAAAAAATCGTAGATTGTGACAGAACAGTTAAATCTGTAATACAATGTGGCCTTTGTGAAAAATCGTTTCAAAAGCTAAATCTTTTGCACCAACATATAACTATTCATTCCGATGGGAACACTGGCATCAACTTTGGAAACTGTCTATATACAAAAATTTTTGAAGGTTCTGAAACTATTGATTATTCCCAACTCCAAAATCAAATTCAAGAGGCATTTCGAACAGGCGACATTAGTACATTTTATCAGGCAACAGATAAATACGGAAATGAACTGCACATTAGTGATTCGGATAGTGATATGGAGGACACAATAATAAAAACTTACATCTGTGAAATATGCAACAAAGTATTAGGAAGACGAACACTTCTGCTACAACACCAAGAAGAGTTTCACAGAGAGGAATTTCTTCCATACAGGTGTGGGAATTGTAATAAGGACTTTGTATGTAAAGATTTGCTGGAGCAACATTTTAAAAGGGACTGTCGTAACGAACAACGGCATAAAAAACATCAATGTGAATTCTGCAGTGCTCACTTTATTTGGCCGAACAATCTATTGAAGCACAGAGAACTTCAGCACAATATATTAACAAAACCGAGTGTATCAGACGCTATTTTTATCCCCGACCAAGAATTGCCTATGACAGAAATTTCGCTGCAACAACCATCCACTGATGTTCTTACATATTATTGTCTTATGTGTCCAAAAACATTTTTTAAAGCGGAAGATCTCAATAATCACTTTAGTCGACATCTTTTATCTCCTTCTGCTATTAAAACAGTTGAAAGTATAATGAATTCTACATGGTGGCCAAACGGCAAAAAAAAAATTATATGCAAAACCTGTAACTTAAAATTTAAATCTATGTCCGAGCTAAGTGAACATTACCAAAATTCAACGTGTGAAAAACTCAAAAATTCTCTTACAAATTATTCCATAACAAATAAAAATGGGTTTGAGTTGCATTTGGAATTAGATTCCGAAACTGAAACGGAAACGGACGACAATAAAATATCGCTATATTCATACAAATGTAGCATGTGCTATAAAACCTTTAAACGGAAATATCAACTGGCCCAGCATCAGCGATCCAGGCACATTTACGAATTGTTAGAGCTAAAATGTGAGCTATGTATATTTAGAACAGTCTCAAGGaaagttttggattaccataaagccactcaatgttttaatgaagaaaagcagtttaagtgtgaccagtgtaattttaggtttatgtggaaagaaaatatggagaatcatattgcaatatgtcatagttcaaaCAGTTTGGCCGAAGTTACTTTTTTAAATCCCCAAAATGTTAATCTTTTAAGCCCAGATAACATTGCGATGAAAGATGTTGTAACAACTTCCGCCAAGTGTAAATCAACAGGAGACGAAAATAGTATGAATAATTATGAATCTAAGAATCTCGATCTACCATCAACATCATCAAATACAAATGTTAATAAAGGAACCGCATCAAAAATCCGGAAAAGATTATCATGTCAACTTTGCGATGTTACTTGCCCTTCTAGTTCGCAAATGGagatgcatatgtggacgcacacgggtgagaaaccttttaagtgtgaattttgcggtttggcatttcgacgaacagatgcattatactcacacaaacgtgctttccacatcaacgaaaatccctttaagtgtaatcaatgcgaaaagTCTTTTAAAGACTTAATCAGCTTGAAGGATCATACGCGTAATCATAAGGAGGGACCATATACGTGCGTCGTATGTAGTAAAACTTTTTCAAATGCACTTTCATTAGGAAAGCATGTTAAAGTAATGGGACATGACAAATCAAATGTGTTGATCATAAAAGATCCGGAAGAGTTGATAAACAATGACTTACCATCAACGTCATCGAATTTAAATATGGATACATCGAAAAACAAGAAAAAAATTTCATGTGAGCTTTGCGATGTTACTTGTTATTCTAGTTGCCAAATGGAGAtacatatgaggacgcacacgggtgagaaaccttttaagtgtgaattttgtgaaaaggaatttagtcgtaaaagtactttaaacggacacaaacgtgctttgcacatcaacgaaagtccatttaagtgcaATGACTGCGAAAAGTCTTTTCAGGACTTGGCCAGCTTGAAAGTTCATGCACGCGATCATAAGGAGAAGGCGGAACCATTTATTTGCGTCGTATGTAATAAAACATTGGCCAATGCTCAATCTTTAGAAAATCATATAAAAATATTGGGACATAACCAAACAAATATTTTCAAACATACTGGGGAGGCACGTttatgtccaatttgtggcaaatacgtgtccgtaaactcaagctttaccttacacatgaaaagacacgctggtgaaaaacctcacaaatgtgacttttgcgatatggcatttattactaagtaccatttaaactgtcaccgaaaaacgcacactggcgagcgtccctttaaatgtactctttgtgaaaagtcattttctttaaattctaaattaaagattcatttccgcgtgcatactggcgaacgcccttacgaatgcaagtattgcaaaaaacggtttggtagccataataattacagcgtacatgtgcgaatgcataccggcgaaaaaaacttcaagtgtgaaacttgcggtgaagcttttacatgcggggcatatttgaaaaaacatcgtatAACTAAACATAAACTTtaa
- Protein Sequence
- MSSSISQDCFINGVQYKCRTCFDPGATTFLLASECSDTKTWRDLLRDMAQLQTEDNDSLPKTVCCKCLDKLINYYDFILQIHSVNKKYEELLGSCNDPLQVQIKDEIITVEDANTDIQEIPLQQPVSEIKLEQEFIVPYDIVTVKNYERCPESVENEALHPSEDINITNVSNSDGIDDSVSLNGNDDFYEFESSLLSSDEDNIDDQSEDYQYHDIKGQSIYEPQMSIIEKTAQTCNKPNNPDIGNSDPFKKIEEVNGRFDCPLCTSTFLFREKCIEHIITVHALQLSKNKDDSEKMNKVPVAIKSKKVPVTNTIKKINDRFMCRICKETFSLKSSCIQHVSMMHQKHDQEQNPIKCDFCEKEFQCREYLQRHLRHLHLDDIRNVKKIVDCDRTVKSVIQCGLCEKSFQKLNLLHQHITIHSDGNTGINFGNCLYTKIFEGSETIDYSQLQNQIQEAFRTGDISTFYQATDKYGNELHISDSDSDMEDTIIKTYICEICNKVLGRRTLLLQHQEEFHREEFLPYRCGNCNKDFVCKDLLEQHFKRDCRNEQRHKKHQCEFCSAHFIWPNNLLKHRELQHNILTKPSVSDAIFIPDQELPMTEISLQQPSTDVLTYYCLMCPKTFFKAEDLNNHFSRHLLSPSAIKTVESIMNSTWWPNGKKKIICKTCNLKFKSMSELSEHYQNSTCEKLKNSLTNYSITNKNGFELHLELDSETETETDDNKISLYSYKCSMCYKTFKRKYQLAQHQRSRHIYELLELKCELCIFRTVSRKVLDYHKATQCFNEEKQFKCDQCNFRFMWKENMENHIAICHSSNSLAEVTFLNPQNVNLLSPDNIAMKDVVTTSAKCKSTGDENSMNNYESKNLDLPSTSSNTNVNKGTASKIRKRLSCQLCDVTCPSSSQMEMHMWTHTGEKPFKCEFCGLAFRRTDALYSHKRAFHINENPFKCNQCEKSFKDLISLKDHTRNHKEGPYTCVVCSKTFSNALSLGKHVKVMGHDKSNVLIIKDPEELINNDLPSTSSNLNMDTSKNKKKISCELCDVTCYSSCQMEIHMRTHTGEKPFKCEFCEKEFSRKSTLNGHKRALHINESPFKCNDCEKSFQDLASLKVHARDHKEKAEPFICVVCNKTLANAQSLENHIKILGHNQTNIFKHTGEARLCPICGKYVSVNSSFTLHMKRHAGEKPHKCDFCDMAFITKYHLNCHRKTHTGERPFKCTLCEKSFSLNSKLKIHFRVHTGERPYECKYCKKRFGSHNNYSVHVRMHTGEKNFKCETCGEAFTCGAYLKKHRITKHKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -