Basic Information

Insect: Stomorhina lunata
Gene Symbol: -
Assembly: GCA_933228635.1
Location: CAKOFY010000014.1:1756488-1762317[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.56 38 5.5 1.5 3 23 251 272 249 272 0.93

2 24 5.1e-06 0.00035 21.4 1.7 1 23 278 301 278 301 0.98

3 24 0.0041 0.28 12.2 0.2 2 20 331 349 330 352 0.92

4 24 0.0027 0.18 12.8 1.3 1 23 430 453 430 453 0.96

5 24 0.0056 0.38 11.8 0.9 2 23 529 550 528 550 0.97

6 24 0.022 1.5 10.0 2.7 2 20 563 581 562 584 0.94

7 24 0.00042 0.028 15.4 2.0 1 23 664 687 664 687 0.96

8 24 0.015 1 10.5 0.3 1 21 694 714 694 715 0.95

9 24 0.12 8.4 7.6 0.2 2 23 727 749 726 749 0.93

10 24 0.00039 0.026 15.5 0.4 2 23 764 785 763 785 0.97

11 24 2.8e-07 1.9e-05 25.4 1.9 1 23 791 813 791 813 0.98

12 24 0.16 11 7.2 0.3 2 23 845 866 844 866 0.96

13 24 3.1 2.1e+02 3.2 1.3 1 21 995 1015 995 1016 0.93

14 24 6 4.1e+02 2.3 1.7 1 23 1025 1048 1025 1048 0.91

15 24 0.0008 0.054 14.5 2.9 2 23 1059 1081 1058 1081 0.97

16 24 0.068 4.6 8.4 6.0 1 23 1088 1110 1088 1110 0.97

17 24 0.011 0.71 10.9 0.0 2 20 1137 1155 1136 1157 0.92

18 24 0.0013 0.085 13.9 2.9 1 23 1211 1234 1211 1234 0.96

19 24 0.21 14 6.9 5.8 1 23 1325 1348 1325 1348 0.95

20 24 7.7e-07 5.2e-05 24.0 0.8 2 23 1376 1397 1375 1397 0.95

21 24 1.2e-06 8.1e-05 23.4 2.0 1 23 1403 1425 1403 1425 0.99

22 24 1.5e-06 0.0001 23.0 2.4 1 23 1431 1453 1431 1453 0.98

23 24 1.6e-06 0.00011 23.0 1.8 1 23 1459 1481 1459 1481 0.99

24 24 0.079 5.3 8.2 0.7 1 22 1487 1508 1487 1511 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.56	38	5.5	1.5	3	23	251	272	249	272	0.93
2	24	5.1e-06	0.00035	21.4	1.7	1	23	278	301	278	301	0.98
3	24	0.0041	0.28	12.2	0.2	2	20	331	349	330	352	0.92
4	24	0.0027	0.18	12.8	1.3	1	23	430	453	430	453	0.96
5	24	0.0056	0.38	11.8	0.9	2	23	529	550	528	550	0.97
6	24	0.022	1.5	10.0	2.7	2	20	563	581	562	584	0.94
7	24	0.00042	0.028	15.4	2.0	1	23	664	687	664	687	0.96
8	24	0.015	1	10.5	0.3	1	21	694	714	694	715	0.95
9	24	0.12	8.4	7.6	0.2	2	23	727	749	726	749	0.93
10	24	0.00039	0.026	15.5	0.4	2	23	764	785	763	785	0.97
11	24	2.8e-07	1.9e-05	25.4	1.9	1	23	791	813	791	813	0.98
12	24	0.16	11	7.2	0.3	2	23	845	866	844	866	0.96
13	24	3.1	2.1e+02	3.2	1.3	1	21	995	1015	995	1016	0.93
14	24	6	4.1e+02	2.3	1.7	1	23	1025	1048	1025	1048	0.91
15	24	0.0008	0.054	14.5	2.9	2	23	1059	1081	1058	1081	0.97
16	24	0.068	4.6	8.4	6.0	1	23	1088	1110	1088	1110	0.97
17	24	0.011	0.71	10.9	0.0	2	20	1137	1155	1136	1157	0.92
18	24	0.0013	0.085	13.9	2.9	1	23	1211	1234	1211	1234	0.96
19	24	0.21	14	6.9	5.8	1	23	1325	1348	1325	1348	0.95
20	24	7.7e-07	5.2e-05	24.0	0.8	2	23	1376	1397	1375	1397	0.95
21	24	1.2e-06	8.1e-05	23.4	2.0	1	23	1403	1425	1403	1425	0.99
22	24	1.5e-06	0.0001	23.0	2.4	1	23	1431	1453	1431	1453	0.98
23	24	1.6e-06	0.00011	23.0	1.8	1	23	1459	1481	1459	1481	0.99
24	24	0.079	5.3	8.2	0.7	1	22	1487	1508	1487	1511	0.90

Sequence Information

Coding Sequence: ATGACTAGCAACAACAAAATTGAATGTTTTATTAATGGGATTCGGTATAAATGTCGCACTTGCTTTGATCCGGGACGTACAGTTTATTCCCTTACAGATGAGGCTAGTGAGACAAAGACTTGGGGTGATTTATTAAAGGATACCACTCAGTTACAGACAAATGACGAGGAACTTCTTCCAAAGACTATGTGTTGCAAGTGTTCGGCAAAGCTTAAAATTTGCTATGATTTCATAGTTCAAATTCGAAATACAAATAAAAAATATTCTCAACTATTGGGCAATTGCAATGATCCACTGCAGGCCATTGACGTTAATTTTGCCGATTGTTTAGCCGAATCAACTATTGATTTGCCATTGGAACAATATATACCGGAAATCAAGATGGAGGATGACATAGTAACGGATGCAGATCCATATAGCATTAATTTAAGTAGTAATAAGATAACGCATACTGAAGCCAAATTGAAAAATGAAGATGCCCGTGACTCTTTAATCGAAACTGAAGCTCAAGAACGGGATAACTCAAAAGAAAGGTATAATCAAAGTTTAGACGAGGATGACAACGACAACAATGATTACAGAAATGAGTCCAGTTCCTTATCGTCCGATGAGAGTGATTATGTACCCTTGAAAAAGCTAAAAATAGAGAAGGCGTCTTCCGCTAAGAGCAGCAAACCGGTCAGAAAGAGAAGAGGCCGAAAGGTTCCAGATTATTATGATAAAATTGAAGAAATAAACGATCGGTACGGATGTCTCATTTGCAAAAAAACCTTTTCATTGCGAAAAGATTGTGGTCGACATATAGCTACGATACATTTGCAACAAAATTTATTTTCATGCGAATATTGCGGACAGAGTTTTAATCGTAAGGATAAAATGCAACTGCACATAAGACGCATGCACTCGGATGAACCCGTATATCCGGTTAATCATAAAGAATGGTTATTCGGGGATCGTTTGTACAGTAAGCCAACAATTTGGCAACGTGTAGAATGTAAACTATGTGATACTACATTCATAAGTACTAAAGATCTTCGTCAGCACTTACCAATACATACTGATATTGACACACTTCATAACATAGAATTGAGCGACAAAATTATTCAACACTTGTTTCCAAATACAATCGATTTAAATTTCGTCAAGGAAAGCATTTGTAAAGACATTCGTGAGAAGCATTGGTTTAAGTACTACACAGTGTTAAATGAAAGTTTTTACGAAATGTCTATCAGTGATACAGAAGCAGAAGATATAGATGAAGAAGAAAATGATGAGCGCACTGAAAAATACAAATGCGATTTGTGCGCAAAAATATTCTCATATAAATACCAAGTTTTTTCTCATTTAAAAGGGTCCCATGGCAACGATGAGATCCCTTTAAGATGTGGACTGTGCAAATTGGAATTTGTTTCAATTAAAATGCACGAACAACATTCTCAAACGCATTGTCGAAATAGACATAAACTCTTAGTTTGCGCGCACTGCCCGGCTAAGTTTGTTTGGCCTGAAAATATTGAAAATCACAAATGTGCATCTAGACAGCTAGCTGCAACTCTGCCGCCAGTTTCAACTAAAGACAAATTAAAGTGTAATGTATGCGATCGAGAATTCGAGATAAAAACAAAATATCTTAAACATTTGGAAACACATGTCGACGGCAGAACAGTATCATCAAAAAACATAATACGTTGTGGTCTTTGTTCGCATACATTTTCAAAATTACGACATTTACGCCAACACATGCCTTTACATGCCGATGGAAAAACTGGCATTGATTTTGAGTCCAGTCTTTATGTTAGGCGTTTTGAACGTACAAAATCGATTAACTATACACTACTGCAACACGAAATACAAAATGCGTATAGAAAATCCCAAATAAGTCGATTTTACCGCGCCATTGATAAGGAAGGCAATGAATTGGACATATTAGATTCCGATAGCGATGAAGAGGATGAAGATGAAATCAATGCTGATTGCATAAAAAAAGAATATACATGTGAACTGTGTAAGGAAACATTTAAAAAAAGAAAACTTTTATTAAACCATCAAAATGAAACTCACAATGATGTGCCCCTTCCTTTTACATGTAAGGATTGTACGCAACAATATGTTAGCGATGATCTGTTGCAACAGCATTTAATGAGAGATTGCTGGAATGAACACAGACGCATAGCCCAACAATGTGATTACTGTAATGCTCGTTTTATATGGCCCAACAATCTTTTGAAGCACAAAGATATTCAGCATAAGAGACATAAACATCCAAAGCCTCAAAGAGCCAGCACTCTTAAATGTGAGTACTGTGAAAAAGTATTTATATGGCCCAAGGACTTAGTGCGTCATAGAAAAACACACACTGAAGGCAAAAAGTTCACTTGTCCACATTGTGATCGCAAATTTCAACGCAAAGATAATTTACTGGCTCACATAAGAATACATTGCCCTGATGGCATTCCAATGATTACAAATCCTGATAAAGCGATAAACTACATACTGCCACATTTGATTAAACCCCATGGGTGTAAACGTATACAATGCATGATCTGTTATTCCGAGTATAATCGGGTGCGTGACCTTAAGTCTCACCTGCGTGCACATCGGTACGAAATTAATTTTGAAAAAAGAAAAGAAAACGAAACAATAGATACGATATCCTCTCAACTATATCCCGATATACCAATGGCCTTAACAGAAGAACAACTAGTTAAGCGTATTGGTTCTGATATTGCTGCGGAAAATAATTTGGAACGGTTTTATTCAATAACTAGTGAAAATGGCAATGAAGTTAGTTTAGACAGTTCGGAAACGGAAAGCGAATCCGATGAAGAACACAATGTCAACGATGATGATGATGATGAAGAGAAAAAGATTGATAAATCAAAACGAGTTTACAAATGCGATTTGTGCCCTAATTTAACTTTTAATAGGAAATATAAAATTTTTGATCACCACGACAAACATCATAAATGGGAGGAAGCACGCCACATCTGCGTACACTGTAATGGGAGATTCCTTTCCTCGTATATGCTGCAATGGCATTATAAAAATCAATGTAAAAATGCAAAAAAACGACACTTTTGTCGTCGATGTCCCTTGCGTTTTATGTGGAAAAGTAATATGAAGGCTCATACCGTTATGGAACATGGACTAGAGGCGGATTTAAATTGGCGCCAAAAATGTTTTTTATGCAATGAAAAATTCCCTACTCAAAAGGATCTTAGACATCATTTGAGCACAGATCATTCTGCTGATGCAGCAATTCATTACTGTCTCCTTTGCACAAAAACATTTTTCAACGTTAAACACCTCAACGACCACTTAAGTCGGCATCGTTTGACTTCAGCCGATGCAAACACCATTGAAAGTATAATACATTCAACATGCTGGCCAAATGGTGAAAAAAGAATAAGTTGTAAAATATGTGGCATAATGTTCGAAAGTATAGCGAACCTAAGGGAACATTTTTCATCCGAAAATTCCCAAAGTTTGTGTGCAAACCAAAATTCTACGACTAATTACACGATTACAAATCAAAAAGGATTCGAATTGGATTTAGAATTAGATTCTGAATCAGACATTGACGATGAGATGCCTGTAGGAAGTTCGAGGGGCAATAAAACTTTTTATCCCTACAACTGTTGCATCTGCAGTATGTCATTTAAGCGAAAATATCAAGTAGCTCAGCATCAGCGCGCTTTGCACAATTATGAAGCCCTAGAATTAAAGTGCGAACGTTGTATTTTTAGGACTGTTTCACAGaaaatattagattatcataaatccacacaatgttttaataccgaaaaacagtacgtgtgcatccaatgtaattttaaatttatgtggcaagaaaatcttgatggccacattgccatgtttcatacaccaaacattttagagaatccaacggacgtCGTTAAGGCGACAACTTCTAAAGAACCAATACCGACGACTAACAGTAATACTAGTATTTTCGAATGTATGGACTGCCATCGGCGTTACAACCGTAAAGATCGTTACAAATCTCATTTTATAAAATTTCACAGCAATGATTTGGAGTTATACGCAGAAAAACTACCAAAACCAAAAGGAAGAAaaccaaaaccaaagacagaaaataaatttttatgcgccttttgtggcctttcgttttctaataattcaaatcttaccatacatatgagaagacacaatggtgataaaccatttaagtgtgaccattgtgacatggcatttccgcgtacatctgatttacagactcaccttcgcacgcatactggtgaacgtcccttcaaatgcacgtactgcgataaatcgtttgcccgacaatacaagttaaatgttcataatcgcatacataccggcgagcgtccatatcaatgtacgttttgtgacaaatcatttattcaatccaatgatttgactctacatttacggcgtcatacgggtgaaagaccttatatatgcaatgtttgtggtgaaggctttatatgtgccacttctctaaaacaacatcgtagctcaaaaggtcatcaagaagaaaaaactgacttgaaaatgtgcgttcaagagatgcaacaattcgatatgaagttctaa
Protein Sequence: MTSNNKIECFINGIRYKCRTCFDPGRTVYSLTDEASETKTWGDLLKDTTQLQTNDEELLPKTMCCKCSAKLKICYDFIVQIRNTNKKYSQLLGNCNDPLQAIDVNFADCLAESTIDLPLEQYIPEIKMEDDIVTDADPYSINLSSNKITHTEAKLKNEDARDSLIETEAQERDNSKERYNQSLDEDDNDNNDYRNESSSLSSDESDYVPLKKLKIEKASSAKSSKPVRKRRGRKVPDYYDKIEEINDRYGCLICKKTFSLRKDCGRHIATIHLQQNLFSCEYCGQSFNRKDKMQLHIRRMHSDEPVYPVNHKEWLFGDRLYSKPTIWQRVECKLCDTTFISTKDLRQHLPIHTDIDTLHNIELSDKIIQHLFPNTIDLNFVKESICKDIREKHWFKYYTVLNESFYEMSISDTEAEDIDEEENDERTEKYKCDLCAKIFSYKYQVFSHLKGSHGNDEIPLRCGLCKLEFVSIKMHEQHSQTHCRNRHKLLVCAHCPAKFVWPENIENHKCASRQLAATLPPVSTKDKLKCNVCDREFEIKTKYLKHLETHVDGRTVSSKNIIRCGLCSHTFSKLRHLRQHMPLHADGKTGIDFESSLYVRRFERTKSINYTLLQHEIQNAYRKSQISRFYRAIDKEGNELDILDSDSDEEDEDEINADCIKKEYTCELCKETFKKRKLLLNHQNETHNDVPLPFTCKDCTQQYVSDDLLQQHLMRDCWNEHRRIAQQCDYCNARFIWPNNLLKHKDIQHKRHKHPKPQRASTLKCEYCEKVFIWPKDLVRHRKTHTEGKKFTCPHCDRKFQRKDNLLAHIRIHCPDGIPMITNPDKAINYILPHLIKPHGCKRIQCMICYSEYNRVRDLKSHLRAHRYEINFEKRKENETIDTISSQLYPDIPMALTEEQLVKRIGSDIAAENNLERFYSITSENGNEVSLDSSETESESDEEHNVNDDDDDEEKKIDKSKRVYKCDLCPNLTFNRKYKIFDHHDKHHKWEEARHICVHCNGRFLSSYMLQWHYKNQCKNAKKRHFCRRCPLRFMWKSNMKAHTVMEHGLEADLNWRQKCFLCNEKFPTQKDLRHHLSTDHSADAAIHYCLLCTKTFFNVKHLNDHLSRHRLTSADANTIESIIHSTCWPNGEKRISCKICGIMFESIANLREHFSSENSQSLCANQNSTTNYTITNQKGFELDLELDSESDIDDEMPVGSSRGNKTFYPYNCCICSMSFKRKYQVAQHQRALHNYEALELKCERCIFRTVSQKILDYHKSTQCFNTEKQYVCIQCNFKFMWQENLDGHIAMFHTPNILENPTDVVKATTSKEPIPTTNSNTSIFECMDCHRRYNRKDRYKSHFIKFHSNDLELYAEKLPKPKGRKPKPKTENKFLCAFCGLSFSNNSNLTIHMRRHNGDKPFKCDHCDMAFPRTSDLQTHLRTHTGERPFKCTYCDKSFARQYKLNVHNRIHTGERPYQCTFCDKSFIQSNDLTLHLRRHTGERPYICNVCGEGFICATSLKQHRSSKGHQEEKTDLKMCVQEMQQFDMKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -