Sbis087971.1
Basic Information
- Insect
- Stictocephala bisonia
- Gene Symbol
- stc
- Assembly
- GCA_035578905.1
- Location
- JAQJVL010000965.1:79614-147330[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.7 1.2e+05 -3.8 1.1 15 18 173 176 172 177 0.80 2 15 1.7 1.3e+05 -3.9 1.6 15 19 200 204 199 204 0.81 3 15 0.13 9.6e+03 -0.3 0.7 4 10 233 239 232 239 0.94 4 15 1.6e-07 0.012 18.6 14.7 4 19 254 269 252 269 0.93 5 15 5.4e-07 0.041 16.9 15.1 1 19 305 323 305 323 0.98 6 15 2.2e-09 0.00017 24.5 18.3 1 19 363 381 363 381 0.99 7 15 0.2 1.5e+04 -0.9 0.7 5 10 412 417 412 420 0.93 8 15 3.1e-07 0.023 17.7 14.2 4 18 430 444 423 445 0.86 9 15 0.96 7.2e+04 -3.1 2.2 5 10 474 479 474 479 0.93 10 15 0.013 9.4e+02 2.9 11.6 1 11 485 495 485 507 0.88 11 15 9.7e-10 7.3e-05 25.7 15.8 1 18 512 529 512 530 0.97 12 15 0.59 4.4e+04 -2.4 0.2 6 10 559 563 558 564 0.79 13 15 2 1.5e+05 -12.1 15.7 9 18 576 586 563 587 0.72 14 15 6.5e-07 0.049 16.6 11.9 1 18 623 641 623 645 0.92 15 15 4e-06 0.3 14.1 15.7 1 19 652 671 652 671 0.97
Sequence Information
- Coding Sequence
- ATGATGGCCAAAATAGATCGCAACGAAATTGatataaacaatattgtgttttcggACGAGTGCTCATTTATGCTGAATGGAAGCGTAAACAGGCACAATTGCCGTTACTGGAGTAGCAAAAATCCTCTCTGGATGCGGGAGGCACACACACAATATCTACAAAAGGTGAATGTCTGGCTTGGTGTGATAGGAAGCAACAACACAAATGAATTTCCTAAACGGCGACATCGAGGCAATGATGAGAAGTCCTATCAAAACACCAGTCGTAACACtgacaaaaacaattatttacgtTCTATGAAATCACAAGAATATTATCAGCCGAAAAAAAATTCACCCCCTAGGAAGTCTCATTCTGGAGCATCCCCTCACAAAGAAAAGAACCAGCTTAGTAACAAAAAAGGAGtggATGATGCAGCATCTCAGCGAGACCGATTAACCGATCAGCTCAACAGAGGGGCCCTTGAATGTCTGGTGTGTTGTGAGCCAGTGCGACCGATGGACACCACTTGGAGCTGCCCTAAGTGTTATCACGTCCTACATCTCAACTGCATTATCACGTGGGCTAACAAATCCAAATCTGATAATGGATGGCGATGTCCAGCTTGTCAGAACGTGTCTATAGCTTTGCCAAAGGACTATTATTGCTTCTGTGGAAAGACTGTGTCTCCTGAGTGGAACCCCTCTGACACAGCGCACTCATGTGGAGAGACTTGCAATCGCCGCAAGGTGTTAGCAAGTGAATACTACTCTTGTGTTCATAAGTGCACCCTGCTCTGCCATCCAGGCCCTTGCCCTCCTTGCTCAGCACTAGTTACAAGGAAATGTGGGTGCGGACAGAGTAGTCAGACTGTGCAGTGTGGCCAACTCCAACCCCTAATGTGTGGTGCTATCTGTGGGAAACCTCTTGCATGCGGAATACACATGTGTCCTGAGCACTGTCATTTTGGACAGTGCCAACCGTGTCAAGTCACTATTAAACAAGTATGCTACTGTGGTAAAAAGGAACGAGAGGTGAGCTGTGATGGCAAGGTCAGTGAGGGTGAGAAGTTCATCTGCGACTCACCATGTGAGGGGAATCTGCTGTGTGGACAGCACAAGTGTAATCAGACCTGTCATGAGGGGCCGTGTGGTTCATGTCCATGGGACCCAGCCCAGGTTACCCACTGTTACTGTGGCAAGACTCCCCTGACGGAAGATCAACAGAGGGTCAGTTGCCTTGATCCCATCCCAACTTGTGACCAGGTCTGCGCCAAGCAACTTCCCTGCGGTCAACCTTCAAGCCCACATCAGTGTAAGGCCCTCTGCCACGCAGGACCCTGTCCCCCCTGTGAGATGTATACCCTTGTCCGCTGCCGCTGTGGCTTCATGGACCAAGAGATTCCTTGCTTAGAACTCACTTCCAAAGCTGATGATGCGAGGTGTCAGAAGAAATGTACTAAAAAGCGAATGTGTGGAAAGCACAAGTGCAACCAAATGTGCTGCATTGATGTGGATCACTTGTGCCCCCTGCCGTGCAACCACATGCTCAGCTGTGGACGTCACCGGTGTGAACAACTCTGTCACCGCGGCCACTGTCAGCCATGTTTACAATCAAGTTTCGAAGAGCTGTTCTGTGAGTGTGGTAGCAGTGTGATGCTACCCCCAGTGCCTTGTGGCACAAAGCCTCCTCAGTGCAACAAGCCGTGCTCCCGCAGGCATAACTGTGACCATGAGGTTCTTCACACCTGTCACAGCTATGATCAGTGTCCTCCATGTGGCATTCTTACTTCCAAGCACTGTCACGGCAAACATGAGCTACGCAAAGCAGTACCTTGTCATGTAGAAGCATTCTCATGTGGCCGTCCATGTGGGCAGAATCTTGCATGTGGCCGACACAAGTGTAACCAGCTGTGTCACACTAACTCCTGTCCAGTAACGTGCAAGCAGCCTTGTATAAAGCCACGCGATTTATGTGGACACCCATGCAATGCCCCTTGTCATGATGGCGAGTGTCCTGACACACCTTGTAAGGAAAAGGTTTTGGTAACTTGCGAGTGTGGCTATCGTAGCATGTCAAAACCCTGCTTTGAAAATAACAGTGAGTACCAGCGAATTGCTACATCTCTGTTGGCTTCTAAGATGGCAGACGTTCAGCTAGGCCGCTCAGTCAACCTTGAGGACATGCAAGGCTGTCGCAAGATCACCATCAAAACCTTGGAATGCACAGAAGAATGTCGTGTTGTGGAAAGGAATCGTCGCCTTGCAATTGGACTTCAGATTCGTAATCCAGACTTGAGTGCCAAGCTTACTCCCCGATATTCTGACTTCATGCGAGCTTGGGCCAAGAAGGATCAGCGATTTTGTCAAAATGTCCATGATAAACTCACTGAACTTGTCAAACTTGCCAAGGAGTCCAAACAGAAGAGCAGGAGTTATTCATTTGAGACGATGAATCGAGAAAAGCGTCAATTTGTACATGAGTACTGCACTCACTTCGGCTGTGAATCAGTAGCATATGATGCTGAGCCAAAGCGGAATGTTGTTGCCACTGCTCAAAGAGACAAGGCTTGGCTTCCTAGCTACAGTTTGTTAGAAGTTGTTCAGCGAGAGATGGGACTTCGTAAAGTGCCTCTACCTAACCTGAATATGGCCAGCCAGAAACCAGTTTCCAAGAGCAATGTGTTACCAGTGAGGGTGGCCCAGCCCCGCAGTGTACCTGACACAGACACTGAAACTGCTCATATCGACTATTTTGACTACAATGGCTGA
- Protein Sequence
- MMAKIDRNEIDINNIVFSDECSFMLNGSVNRHNCRYWSSKNPLWMREAHTQYLQKVNVWLGVIGSNNTNEFPKRRHRGNDEKSYQNTSRNTDKNNYLRSMKSQEYYQPKKNSPPRKSHSGASPHKEKNQLSNKKGVDDAASQRDRLTDQLNRGALECLVCCEPVRPMDTTWSCPKCYHVLHLNCIITWANKSKSDNGWRCPACQNVSIALPKDYYCFCGKTVSPEWNPSDTAHSCGETCNRRKVLASEYYSCVHKCTLLCHPGPCPPCSALVTRKCGCGQSSQTVQCGQLQPLMCGAICGKPLACGIHMCPEHCHFGQCQPCQVTIKQVCYCGKKEREVSCDGKVSEGEKFICDSPCEGNLLCGQHKCNQTCHEGPCGSCPWDPAQVTHCYCGKTPLTEDQQRVSCLDPIPTCDQVCAKQLPCGQPSSPHQCKALCHAGPCPPCEMYTLVRCRCGFMDQEIPCLELTSKADDARCQKKCTKKRMCGKHKCNQMCCIDVDHLCPLPCNHMLSCGRHRCEQLCHRGHCQPCLQSSFEELFCECGSSVMLPPVPCGTKPPQCNKPCSRRHNCDHEVLHTCHSYDQCPPCGILTSKHCHGKHELRKAVPCHVEAFSCGRPCGQNLACGRHKCNQLCHTNSCPVTCKQPCIKPRDLCGHPCNAPCHDGECPDTPCKEKVLVTCECGYRSMSKPCFENNSEYQRIATSLLASKMADVQLGRSVNLEDMQGCRKITIKTLECTEECRVVERNRRLAIGLQIRNPDLSAKLTPRYSDFMRAWAKKDQRFCQNVHDKLTELVKLAKESKQKSRSYSFETMNREKRQFVHEYCTHFGCESVAYDAEPKRNVVATAQRDKAWLPSYSLLEVVQREMGLRKVPLPNLNMASQKPVSKSNVLPVRVAQPRSVPDTDTETAHIDYFDYNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -