Sbis075126.1
Basic Information
- Insect
- Stictocephala bisonia
- Gene Symbol
- nfxl1
- Assembly
- GCA_035578905.1
- Location
- JAQJVL010000575.1:264557-292657[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.65 4.9e+04 -2.6 1.1 15 19 186 190 185 190 0.81 2 13 0.089 6.7e+03 0.2 0.8 4 10 221 227 220 227 0.95 3 13 1.6e-08 0.0012 21.7 16.6 1 19 235 252 235 252 0.99 4 13 0.34 2.5e+04 -1.6 1.3 8 13 257 262 256 263 0.77 5 13 1.2e-08 0.00092 22.1 14.6 1 19 288 306 288 306 0.99 6 13 0.25 1.8e+04 -1.2 0.9 6 10 331 335 330 337 0.89 7 13 1.4e-08 0.001 22.0 14.9 1 19 341 359 341 359 0.99 8 13 1.5 1.1e+05 -3.7 0.6 5 10 383 388 383 388 0.74 9 13 2.4e-06 0.18 14.8 12.1 1 18 394 411 394 412 0.97 10 13 0.094 7.1e+03 0.1 0.6 1 10 421 430 421 430 0.79 11 13 7.3e-05 5.5 10.1 16.7 1 18 446 463 446 464 0.94 12 13 8.5e-10 6.4e-05 25.8 16.2 1 19 473 491 473 491 0.99 13 13 0.64 4.8e+04 -2.5 1.2 5 10 519 524 519 524 0.93
Sequence Information
- Coding Sequence
- aTGAGCCATTTCCGAGATGGAAACAAACGTGAAAACCCTTGGGGGAGAGGTAGAGGAGGGAATCGTTCACAAGGAGGATCAAATCAAAGCTTAAAAACAAATAAGCAAAATCCTAAACCTGGTGAAAAAGCCAATGATTCAAATATAAATGTATCCACATCTCAAGATAAATTCTTGAAAGCTAAGCAATATATGCAAGAAGCAGTGGAAAAACATAAACTATCTGGATACGAGTCATCAAGTGAGGAAGAGGAACTTGAAAGCGAAAATATTTTggGGTCAGTGTTAAAATCCTATGCGTCTCTTGGAGGAACTAATGAAGATCTGGGCCGTACGCAGAATTTTTTGGAAGATGCATTTCAATCTGGAGCTGCTATATGTTTAATATGTATAGCTACAGTGAAGAGGAATGATGCTatttgGAGCTGTGAAAATTGTTGGGGATTTTTCCATCTTCTGTGTGTGCAGCGATGGGCCAAAGACAGTATAGCTCACCAGAAGGCAGCTCTTGATGATCGCCCCGCAGGTCAACCACTTACAAAAATATCATGGGCATGTCCCAAATGTCGCCAAAGCTACGCACCAAATGAGATTCCTCAACGCTATTACTGTTTCTGTGGTAATACCGAAGACCCTGTATTCCATCCATGGTTGGTACCTCATTCTTGTGGGGAAACTTGCAACCGACCTTTGAAGCCAGAATGTGGACATCGTTGCCTCCTTCTCTGCCACCCAGGACCATGCCCCCCTTGCCCCAAAACAATCAAGGCACCCTGCCACTGTGGGAAGAGTAATCCACGACCACAGCGATGCAGCAACAAGGTTTGGTCTTGTGGTCAGGAGTGTGCTCGGCCTCTCAGCTGTGGCAAGCACTTGTGTAATCAAACATGTCACTCCGGGGAGTGTCCTGCCTGCCCACGCCGCTCCACCCAGACCTGCGACTGTGGCCGAGAACAGATGACACGGGAGTGTGCTAGTCCCAATTGGCAATGCAAACAGGTTTGTGGTAAGCATCTGTCTTGTGGAGATCATGTATGTGAACAGGTATGCCACAAGGGACCATGTGGGGACTGTCCTAGGAGTCTGCCCCGACTATGCCCCTGCGGCAAGTCGACTTTGATGCTTCCATGTACACAGGATGTCCCTACCTGCGGAGACACTTGTGGACGCACACTTGACTGTGGAAGACATCAGTGCTCTCAGCGCTGCCACAAAGATAAATGTGGTGTTTGCCTGGAGCGAACAGAGAAGAGGTGCCGTTGTGGTCTACATACTAAAGAAGTGCCCTGCCAGAAAGATTACCTGTGCGAGACCAAGTGCAAGCAGATAAAAGACTGCAATAGGCATCCTTGCAACAGAAAATGTTGTGATGGCAACTGTGGACCTTGTGAAAAGCCGTGTGGAAGAACGTTGGTCTGTGGTCACCACAAGTGTGCCTCGGTGTGCCACCGCGGACCCTGCTACCCTTGTCCCCTGACAGTTCAGGTCAAGTGTCGATGTGGGGCCACAGCAATCACAGTACCTTGTGGACGTAACAAGAAAACACGCCCTCCTCGATGCACGAAACTCTGCAAGTAA
- Protein Sequence
- MSHFRDGNKRENPWGRGRGGNRSQGGSNQSLKTNKQNPKPGEKANDSNINVSTSQDKFLKAKQYMQEAVEKHKLSGYESSSEEEELESENILGSVLKSYASLGGTNEDLGRTQNFLEDAFQSGAAICLICIATVKRNDAIWSCENCWGFFHLLCVQRWAKDSIAHQKAALDDRPAGQPLTKISWACPKCRQSYAPNEIPQRYYCFCGNTEDPVFHPWLVPHSCGETCNRPLKPECGHRCLLLCHPGPCPPCPKTIKAPCHCGKSNPRPQRCSNKVWSCGQECARPLSCGKHLCNQTCHSGECPACPRRSTQTCDCGREQMTRECASPNWQCKQVCGKHLSCGDHVCEQVCHKGPCGDCPRSLPRLCPCGKSTLMLPCTQDVPTCGDTCGRTLDCGRHQCSQRCHKDKCGVCLERTEKRCRCGLHTKEVPCQKDYLCETKCKQIKDCNRHPCNRKCCDGNCGPCEKPCGRTLVCGHHKCASVCHRGPCYPCPLTVQVKCRCGATAITVPCGRNKKTRPPRCTKLCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -