Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0009 15 8.2 0.2 20 34 30 44 27 45 0.85

2 10 0.00092 15 8.2 0.2 20 34 65 79 62 80 0.85

3 10 0.00092 15 8.2 0.2 20 34 100 114 97 115 0.85

4 10 0.0009 15 8.2 0.2 20 34 135 149 132 150 0.85

5 10 0.00092 15 8.2 0.2 20 34 170 184 167 185 0.85

6 10 0.0009 15 8.2 0.2 20 34 205 219 202 220 0.85

7 10 0.00092 15 8.2 0.2 20 34 240 254 237 255 0.85

8 10 0.0009 15 8.2 0.2 20 34 275 289 272 290 0.85

9 10 0.0034 57 6.4 0.2 20 31 310 321 307 325 0.81

10 10 1.7 2.9e+04 -2.3 0.3 1 9 347 355 347 356 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0009	15	8.2	0.2	20	34	30	44	27	45	0.85
2	10	0.00092	15	8.2	0.2	20	34	65	79	62	80	0.85
3	10	0.00092	15	8.2	0.2	20	34	100	114	97	115	0.85
4	10	0.0009	15	8.2	0.2	20	34	135	149	132	150	0.85
5	10	0.00092	15	8.2	0.2	20	34	170	184	167	185	0.85
6	10	0.0009	15	8.2	0.2	20	34	205	219	202	220	0.85
7	10	0.00092	15	8.2	0.2	20	34	240	254	237	255	0.85
8	10	0.0009	15	8.2	0.2	20	34	275	289	272	290	0.85
9	10	0.0034	57	6.4	0.2	20	31	310	321	307	325	0.81
10	10	1.7	2.9e+04	-2.3	0.3	1	9	347	355	347	356	0.87

Coding Sequence: ATGTCTTCATCACCAAACAAGTACACTGTAATTGATGACTATATTGTCTCCAGCTTCATTCTTAGCGTTATGTACTGTCACCTGGAGACAATGTTGTGTAACTCATGTCGTCGTTACCACACAAGTCACACTGTTATTGATGACTATATTGTCTCCAGCTTCATTCTTAGCGTTATGTACTGTCGCCTGGAGACAATGTTGTGCAACTCATGTCGTCGTTACCACACAAGTCACACTGTTATTAATGACTATATTGTCAGCAGCTTCATTCTTAGCGTTATGTACTGTCGCCTGGAGACAATGTTGTGTAACTCATGTCGTCGTTACCACACAAGTCACACTGTTATTGATGACTATATTGTCAGCAGCTTCATTCTTAGCGTTGTGTACTGTCACCTGGAAACAATGTTGTGTAACTCATGTCGTCGTTACCACACAAGTCACACTGTTATTGATGACTATATTGTATCCAGTTTTATTCTTAGCGTTATGTACTGTCGCCTGGAGACAATGTTGTGTAACTCATGTCGTCGTTACCACACAAGTCACACTGTTATTGATGACTATATTGTCAGCAGCTTCATTCTTAGCGTTGTGTACTGTCACCTGGAGACAATGTTGTGTAACTCATGTCGTCGTTACCACACAAGTCACACTGTTATTGATGACTATATTGTCAGCAGCTTCATTCTTAGCGTTATGTACTGTCGCCTGGAGACAATGTTGTGTAACTCATGTCGTCGTTACCACACAAGTCACACTGTTATTGATGACTATATTGTCAGCAGCTTCATTCTTAGCGTTGTGTACTGTCACCTGGAAACAATGTTGTGTAACTCATGTCGTCGTTACCACACAAGTCACACTGTTATTGATGACTATATTGTCAGCAGCTTCATTCTTAGCGTTGTGTACTGTCACCTGGAAACAATGTTGTGTAACTCATGTCGTCGTTACCACACAAGTACACTGTTATTGATGACTATAGTGTCACCAGCTTCATTCTTAGCGTTATGTATTGTCGCCTGGAGACAATGTTGTGTATCTTGTGTCGTCATTACCACACAAGTTCACTGTAATTGA
Protein Sequence: MSSSPNKYTVIDDYIVSSFILSVMYCHLETMLCNSCRRYHTSHTVIDDYIVSSFILSVMYCRLETMLCNSCRRYHTSHTVINDYIVSSFILSVMYCRLETMLCNSCRRYHTSHTVIDDYIVSSFILSVVYCHLETMLCNSCRRYHTSHTVIDDYIVSSFILSVMYCRLETMLCNSCRRYHTSHTVIDDYIVSSFILSVVYCHLETMLCNSCRRYHTSHTVIDDYIVSSFILSVMYCRLETMLCNSCRRYHTSHTVIDDYIVSSFILSVVYCHLETMLCNSCRRYHTSHTVIDDYIVSSFILSVVYCHLETMLCNSCRRYHTSTLLLMTIVSPASFLALCIVAWRQCCVSCVVITTQVHCN

Sequence clustering based on sequence similarity using MMseqs2