Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.4 6.6e+03 -0.2 0.1 7 14 78 85 76 90 0.77

2 3 2.4e-18 4.1e-14 54.8 3.2 1 34 111 143 111 145 0.97

3 3 4.2e-19 7e-15 57.3 6.7 1 35 169 202 169 203 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.4	6.6e+03	-0.2	0.1	7	14	78	85	76	90	0.77
2	3	2.4e-18	4.1e-14	54.8	3.2	1	34	111	143	111	145	0.97
3	3	4.2e-19	7e-15	57.3	6.7	1	35	169	202	169	203	0.98

Coding Sequence: ATGTTCCACGGCTCTGCGGGCTCAGCTCCCTCGGCCAACTACCCCGACACCAACGCTTCAGGGTACTCCCAACAGCCTGTGTACGTCCCGTCCAACCGCGTCTTCCAGTGGAGCCCGGCCTACAACTCCTCATCAACCCAGAACTCCTCATGGCACCCTCAGAGCTCGGGTGCGCCTCACGATCACTACTCAGCCCAGACTCCTGCCCACTTCAACAGCTTCTATGCGGCGCAGACCACCATGATGTGGCGCACTTACGATCCGTCTGGCTTCCAGAGGTCATTGCCCTACGAAGACGCAATGCAGTTCCAGATGGGCGAAGGCCGGGAGTGTGTGAACTGTGGGGCCATCTCTACCCCTCTCTGGCGACGAGACGGCACCGGCCACTACCTCTGCAACGCTTGTGGTCTCTACCACAAGATGAATGGTATGAACCGACCCCTCGTCAAGCCAGCCAAGCGTCTTGTCAGCCTTGGGAGTGCTAGCCGGCGGATCGGCGTCTGCTGCACCAACTGTGGGACTCAGACGACCACCCTCTGGCGACGGAACAACGAGGGTGAGCCTGTCTGTAACGCCTGCGGCCTCTACTACAAGCTGCACGGCGTCAACCGACCACTGGCCATGCGCAAGGATGGTATCCAGACCCGCAAGCGCAAGCCGAAGAAGGCTTCCGGTTCTGGCGGAGAGTCGATACCGTCCACTGCCACTTCATCGACTCCTTCTTCTGGTCCCTCCAACGGTAAAACATCAGTTGTTGATTTGATTAGATATAAGTAA
Protein Sequence: MFHGSAGSAPSANYPDTNASGYSQQPVYVPSNRVFQWSPAYNSSSTQNSSWHPQSSGAPHDHYSAQTPAHFNSFYAAQTTMMWRTYDPSGFQRSLPYEDAMQFQMGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPAKRLVSLGSASRRIGVCCTNCGTQTTTLWRRNNEGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKASGSGGESIPSTATSSTPSSGPSNGKTSVVDLIRYK

Sequence clustering based on sequence similarity using MMseqs2