Basic Information

Insect: Stictocephala bisonia
Gene Symbol: -
Assembly: GCA_035578905.1
Location: JAQJVL010000251.1:1118887-1147496[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0017 0.69 13.4 4.9 1 23 577 599 577 599 0.97

2 20 0.011 4.4 10.9 0.1 2 21 653 672 652 673 0.93

3 20 0.0075 3 11.4 1.2 2 21 681 700 681 701 0.94

4 20 0.00025 0.1 16.0 0.1 3 23 738 759 736 759 0.96

5 20 0.02 7.8 10.1 5.5 1 23 790 812 790 812 0.93

6 20 0.19 76 7.0 9.9 1 23 818 840 818 840 0.98

7 20 0.0088 3.5 11.2 0.5 2 23 850 871 850 871 0.96

8 20 0.00094 0.37 14.2 0.8 1 23 879 902 879 902 0.98

9 20 1.4e-05 0.0055 20.0 2.4 1 23 936 958 936 958 0.97

10 20 0.013 5.1 10.7 0.7 2 19 979 996 979 997 0.95

11 20 0.12 46 7.7 0.9 2 19 1025 1042 1024 1044 0.94

12 20 0.34 1.3e+02 6.2 0.3 3 21 1064 1082 1063 1083 0.93

13 20 0.0093 3.7 11.1 1.5 2 20 1117 1135 1116 1137 0.92

14 20 0.02 7.8 10.1 4.1 2 20 1162 1180 1161 1182 0.93

15 20 0.001 0.4 14.2 1.0 1 19 1233 1251 1233 1254 0.95

16 20 0.1 40 7.9 0.3 2 23 1274 1296 1273 1296 0.92

17 20 1.7 6.8e+02 4.0 1.2 1 23 1328 1351 1328 1351 0.95

18 20 0.00022 0.088 16.2 0.2 1 23 1415 1437 1415 1437 0.97

19 20 0.00041 0.16 15.4 0.3 1 23 1534 1556 1534 1556 0.97

20 20 0.56 2.2e+02 5.5 1.1 1 22 1578 1599 1578 1602 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0017	0.69	13.4	4.9	1	23	577	599	577	599	0.97
2	20	0.011	4.4	10.9	0.1	2	21	653	672	652	673	0.93
3	20	0.0075	3	11.4	1.2	2	21	681	700	681	701	0.94
4	20	0.00025	0.1	16.0	0.1	3	23	738	759	736	759	0.96
5	20	0.02	7.8	10.1	5.5	1	23	790	812	790	812	0.93
6	20	0.19	76	7.0	9.9	1	23	818	840	818	840	0.98
7	20	0.0088	3.5	11.2	0.5	2	23	850	871	850	871	0.96
8	20	0.00094	0.37	14.2	0.8	1	23	879	902	879	902	0.98
9	20	1.4e-05	0.0055	20.0	2.4	1	23	936	958	936	958	0.97
10	20	0.013	5.1	10.7	0.7	2	19	979	996	979	997	0.95
11	20	0.12	46	7.7	0.9	2	19	1025	1042	1024	1044	0.94
12	20	0.34	1.3e+02	6.2	0.3	3	21	1064	1082	1063	1083	0.93
13	20	0.0093	3.7	11.1	1.5	2	20	1117	1135	1116	1137	0.92
14	20	0.02	7.8	10.1	4.1	2	20	1162	1180	1161	1182	0.93
15	20	0.001	0.4	14.2	1.0	1	19	1233	1251	1233	1254	0.95
16	20	0.1	40	7.9	0.3	2	23	1274	1296	1273	1296	0.92
17	20	1.7	6.8e+02	4.0	1.2	1	23	1328	1351	1328	1351	0.95
18	20	0.00022	0.088	16.2	0.2	1	23	1415	1437	1415	1437	0.97
19	20	0.00041	0.16	15.4	0.3	1	23	1534	1556	1534	1556	0.97
20	20	0.56	2.2e+02	5.5	1.1	1	22	1578	1599	1578	1602	0.90

Sequence Information

Coding Sequence: ATGAGTGAAGCGTTAATTATATCAGACATAAACGGCATTTGTCGTTTGTGTTTGAAGGATAACGGTACTATTATTCCGATATTTGGAAGAGAAAACACATCTAGAGATTGCATTCCTCTCTCGAAGAAAATTCTTGATTGTGTATCAGTAAATGTAGTGCATGGAGATGGACTGCCAAACACAATTTGTGTTAGCTGTGTCCATCAGGTGGACTCCTGGCATGGGTTCAAGAATACCTGCGATTCTTCCCAGAAGAAGCTATCCTCTTGGCTTAAAAAAACAAATCCAGACTTGTTTAAAAAGAATGAAGCAGAAAAAAGATGGCGAAACAGAAGAAACTCAAGTGGACCCAATGCCCAGTCTTCATCTGTCATTGATGTATCAAGTGATGATGACAATGATGATGAAGTTGTCATTACTCAGCCTGTTATGAGACATGTCTTTAGTGGGCGAAGACAACAGCCACGGAGCAGGCTTACTGGTCATCATCAAAACTTTCAACTTATGTCTATCAATACAAATGAAATTGAAATCCTACCTATAGACAACGTTTCATGTATTAGTGGGAAAGGAGGAGATTTGGACGGAGGTGTTCATAATCCAATATCAGACTTACCTGATGTTGTAACTGGACTGAACACTTCAGTTACGCTGGTTCAATCTAGAAGTACTGGACAGTTATTACCTGATTCAGACTTGTCTGAACACCCTCACGTTGAAAGCCTTACCAAAGATGTGATTCCAAAAGGAGTTGTAATTAACGAACAAGTTGCTGTTGAAGAAGCGCCTGAAGAAAATTTAGAGGAAGATGAAAGTAATAGAAATATTGAACAAGTACAAATAATTGAGACAGAATTCCATTCAGTTGCAGACAATGATGGTTCAGAATCAAACGATCATGTTGCTTTGACTGAAAATGCAGTTGATTCACCTGTAAATAGCCACCCACTTGTGGAACAAGAGAATTCAGAGTGGTCCAATGTAAACTGTGCTGAAGAGATTTCAGGTAAAGAAAACGAGACTGAAAATAGAATTGATGATGAAAGTACAAATTGTGCACCTTCTGGTAATTCTGTTGATAATAATATCAATGGAGAAAAAACACTTGATTTTGATAAACCCATTGAAGAATCTTCAATGAATTCAACAGAAAACAGTTCTTCATTTGTAATAGAAAAAATAACTTCTTTGACCAATCATGAAAGAATGGATGAAGATCTGAACAGTCAGCAACAAGATGATGAGAATGCTGATGTGCTGACTACCAGTAGCAGATTGACGCAAGATGAAGATTCACAAGACGCTCAGCCAGATATAGTCCTGTGTGACCCATCGATGgtGATGAATATAAAAGAAGAACCATTGAGTGCAAGTGAAGCTACAGGCGATGAAGAAGACCCACTCAACTTCCACAATATTACTTTAAAAGGGGAATCTATGGAGTGGCCAAGTGAAACTGAAGATGTCAAACCAAATATTAGATTGTTAAATGAAGCAATGGAGACTAACTACACACCTAAAAGACTGAAATGCGGAAAACTCCACTGTGAACCGTGCCGTGTTTCCTTTATCAACGATGTCTATTACGAAAGACACGCTACTTCGTTGAgacataagttaaattttaagttatttcgTTCAGGCAGAGCTCCAACCAGGAAACGTGGAAAGTCTCTTATCCAGGCTATTATGGGCAATAATTTTGAAACTGTACCAAAGACTGGACCATTTTTCTGTAACCAATGTCCGAGTGcatttaaacatttaagaaaTTTGAAGACTCATCAAAAGAAACACCTTGTTCAAGCTCAGTATACCGATCAGTATCAACCTAGTCCTTCAGGATCACAAGAAATTTTTGACATGGAACCTTCGATGCAGGAGACTGAACAACCATCAAAACCTCCAATGAGATTAAGTGCCCAGAATGCCAGATTTGTAAACCAGGCAGAAACTATGTGTGATCTCTGTGATCAGAGCTTTACTACTCTACCAGCATTGTTGTCTCATAAACGTTACTGTGGATTTTCAGAAAATCGTGTATGTAAATGGTGCCGTCAAACCTTCACCACTCTCtccttattttttaaacatagaaAAGAGTGTACTAAATTGCATAGGGCAATGTCATTTGACACGAGCCAGCAGCAAGTGAACAACTATCCTCCGGCTGTTCCATCCCCTGTCCCTAAAGATGGTTCAGTATTAGCGTGCACTTTGTGTAATCTTTCTTTCGAGACTTCTGCAGATTTAATTGACCATATGCAAAAGAATCATAtggatttcggtaaaccacaacCTCATATGACTGAGCTGCCAAACTTTGCTAAACCCAATCATTTCAGCCGAACAAATGACAGCAGACTCcactattgtaaatattgtttaaggTCATTCACGACTCACAGCGCTCTCTCCAGCCACACAGGATACCATGCAAGGAAGAGTGTGTATTGTTGTAAGTTTTGCAGGCATAGCTACAGAGATAAATTGACTTTTAGGCAACATATGAAAACTCACATAAGCAATCCAAATTTAAATAGGAATGTGTGTTGGATTTGTTATACTCCATTTTCTTCACACAAAGATTTGATTGATCACAAAAATGTCCatgctaaaattaaaatgaaaatattttcttgtgATTCTTGTGACAACTCTTATAACACTCGGGAACTGTTGGCCAAACATAAAAGAACTGCTCATGATGCTGTAAGTCAGATGACAATGTTTGGAGATCATATCTTGGAGGATGATGGAGCAGCAGAGCCAAAAGTTCAAATGATGGATGAagacaataaattgtttaaatgtcGAATATGTAAGAAAAGATTTACCACTCTTGGAAATTTGAAAAGGCACAATTTGATCCATAAAAGACCTCAAAATGTTGGTAACTTGGGTGTTGTAAATAGTGAACATACTTATCAAAACCGTTGTAATTGGTGTTTGAGAACTTTTAAAACCCAAAGTGGTTTGTTAAATCATAAACCACTTTGTAACCGCGTCAAAACAACTGCAGTGCCAAATGCAAACGCTTTAACAATTGGAAACCCATTTAATAAAGCTTTAAAATGTAAAGGCTGCAAGAAATGGTTTGCATCCAAAAATTCTTTATACAAGCATAAAGTGTTAAAACGTTGTAGAGTCATGCCAGTAAATCCAATAGTTCAACTCAGACCAAAAAATTGTCCTAATTGTGACCAGCAGTTTTTAAGTGAAGAGAGCTTGAACCGTCACAAACAGCTTTGTAAACCGACAATTGAGAGACTCACATGTGACTGTGGTGAGGTATTTGCTTCTGTAGAACAGAAGTTAATTCATGCGGATTCCTGCCAATCAAACTGTACTTGCAAATTTTGCAATATGAAATTTAATAGTCCAGATGAACTGGAATCTCACAAATCCATATGTCAGATCCAGTCTCAACGTGCTCCCAGCCCACAACCTTCTTATACAAATGAGACCAGAGCAACTCCACTAGAATGTcataaatgcaataaaaaatttatctaTAATAAGTGTTTACGTATGCACTTAGACAAGTGTTTGTATGATAGATGGCCATGCACAAACTGCATGGAGATATTTGCATCTGAAACCGCTTTGGCAACTCATAAAAGCCACAAAACTTGCCAGTCATCTAGACTTAATAACAAGTCTTCTTTACTTGTCCCACCAAATGAAAGTCCCACATTCAAATGTGAATACTGTCCTACACGGTTTACTTCAGGCAGTGAATTGAAGCAACACTCGTTTACATGTGAGAATAGGCCATCTGTAAGACAAAAGGATGTTGACTTAGTTTACCGACCTTGGAGCTGTGACTTGTGTGACAAGTCATTTTTGTGGAAAGCTAATTTGTGGCGTCACAAAAAGTTAATCCATAAAATAGTTGTCCAAAGCAAAAGAAGTGTAACGGGAAGTAGTAGTACAAGTGGATCTCCATCCCGGACAGGTCAAGATGGTGAAAAAGAATTGTATAAATGCACTTACTGCCCTGATATCATCTTTCACAAAAAGCAAGGTTTCATTGAACACCAGATGGCCCATGAACGAGAAAAAGGTAAACATAATTTGGAACCAGAAGTTGATGATGGAGAAAATGTTTTGCTAACTTGTGAACTGTGTGACAAAAAAATTCCAGAATCATTTTATCCTTTGCATATGGATGAGCACATGAATGACGATTTTGAAGGCTCTCCTGAACAAGAAAAGGATGACTCTACAACTGGTGAAAAATATGCATGTGATATTTGTGGTAAAGAGTTTGCGACATCTGTAAGTAGGAAGAGTCACAGAGCTACCCACTACAGGAGTGGAGATATAATGGCGCATGAGATGTCACCAAAGAAAAAggataaaagaaaaattaaagttaaacacGTTAGGTGCCATACGTGTCATAAACTTTTGTCTATCAATTCAATGCATAAACACCGGATGATGCATGCCAGGGAAGAAGCTGAGTTTTTTGGTGAAAACCAAAATTCAACCCCAATTAAGTCTTCTTCAGTAGCAAATACTCCCAGAAGTGCCACACCTAGTGTGATGTCGGACGTTCAGTCAGAGATTAATGAAGATGATGATACAACAGTATTCCCTTGCCCAAAGTGTGATGGATCATTCAAACTCCGCAAATCTCTGCTGGAACATATGAAGGGCCATGCAGATGACAGTATGGAGACTGAGAGTACATCGTCAGCCACAGGCCCGGCCGATCAGTATCAGTACAAATGTGTTTATTGTGATTTGTCATGGAAATACAAAAGTGTTTATGAGAGACATTTGGCTTCCAAAAAGCACTTGGAAATTCAGAAACAGTTGGCtggtattatttaa
Protein Sequence: MSEALIISDINGICRLCLKDNGTIIPIFGRENTSRDCIPLSKKILDCVSVNVVHGDGLPNTICVSCVHQVDSWHGFKNTCDSSQKKLSSWLKKTNPDLFKKNEAEKRWRNRRNSSGPNAQSSSVIDVSSDDDNDDEVVITQPVMRHVFSGRRQQPRSRLTGHHQNFQLMSINTNEIEILPIDNVSCISGKGGDLDGGVHNPISDLPDVVTGLNTSVTLVQSRSTGQLLPDSDLSEHPHVESLTKDVIPKGVVINEQVAVEEAPEENLEEDESNRNIEQVQIIETEFHSVADNDGSESNDHVALTENAVDSPVNSHPLVEQENSEWSNVNCAEEISGKENETENRIDDESTNCAPSGNSVDNNINGEKTLDFDKPIEESSMNSTENSSSFVIEKITSLTNHERMDEDLNSQQQDDENADVLTTSSRLTQDEDSQDAQPDIVLCDPSMVMNIKEEPLSASEATGDEEDPLNFHNITLKGESMEWPSETEDVKPNIRLLNEAMETNYTPKRLKCGKLHCEPCRVSFINDVYYERHATSLRHKLNFKLFRSGRAPTRKRGKSLIQAIMGNNFETVPKTGPFFCNQCPSAFKHLRNLKTHQKKHLVQAQYTDQYQPSPSGSQEIFDMEPSMQETEQPSKPPMRLSAQNARFVNQAETMCDLCDQSFTTLPALLSHKRYCGFSENRVCKWCRQTFTTLSLFFKHRKECTKLHRAMSFDTSQQQVNNYPPAVPSPVPKDGSVLACTLCNLSFETSADLIDHMQKNHMDFGKPQPHMTELPNFAKPNHFSRTNDSRLHYCKYCLRSFTTHSALSSHTGYHARKSVYCCKFCRHSYRDKLTFRQHMKTHISNPNLNRNVCWICYTPFSSHKDLIDHKNVHAKIKMKIFSCDSCDNSYNTRELLAKHKRTAHDAVSQMTMFGDHILEDDGAAEPKVQMMDEDNKLFKCRICKKRFTTLGNLKRHNLIHKRPQNVGNLGVVNSEHTYQNRCNWCLRTFKTQSGLLNHKPLCNRVKTTAVPNANALTIGNPFNKALKCKGCKKWFASKNSLYKHKVLKRCRVMPVNPIVQLRPKNCPNCDQQFLSEESLNRHKQLCKPTIERLTCDCGEVFASVEQKLIHADSCQSNCTCKFCNMKFNSPDELESHKSICQIQSQRAPSPQPSYTNETRATPLECHKCNKKFIYNKCLRMHLDKCLYDRWPCTNCMEIFASETALATHKSHKTCQSSRLNNKSSLLVPPNESPTFKCEYCPTRFTSGSELKQHSFTCENRPSVRQKDVDLVYRPWSCDLCDKSFLWKANLWRHKKLIHKIVVQSKRSVTGSSSTSGSPSRTGQDGEKELYKCTYCPDIIFHKKQGFIEHQMAHEREKGKHNLEPEVDDGENVLLTCELCDKKIPESFYPLHMDEHMNDDFEGSPEQEKDDSTTGEKYACDICGKEFATSVSRKSHRATHYRSGDIMAHEMSPKKKDKRKIKVKHVRCHTCHKLLSINSMHKHRMMHAREEAEFFGENQNSTPIKSSSVANTPRSATPSVMSDVQSEINEDDDTTVFPCPKCDGSFKLRKSLLEHMKGHADDSMETESTSSATGPADQYQYKCVYCDLSWKYKSVYERHLASKKHLEIQKQLAGII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -