Basic Information

Insect: Stictocephala bisonia
Gene Symbol: Rreb1
Assembly: GCA_035578905.1
Location: JAQJVL010000855.1:119916-146032[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00099 0.39 14.2 0.5 1 23 139 161 139 161 0.98

2 15 0.0013 0.52 13.8 0.2 1 23 179 201 179 201 0.97

3 15 2.1e-07 8.2e-05 25.8 0.7 1 23 207 229 207 229 0.98

4 15 0.67 2.6e+02 5.3 3.6 2 23 347 369 347 370 0.94

5 15 0.018 7.2 10.2 0.6 1 21 421 441 421 441 0.95

6 15 0.042 17 9.0 0.1 1 23 608 630 608 630 0.97

7 15 6.9e-06 0.0027 21.0 2.6 1 23 642 664 642 664 0.99

8 15 0.0079 3.1 11.3 4.3 1 23 670 693 670 693 0.97

9 15 0.0011 0.43 14.0 2.8 1 23 1121 1144 1121 1144 0.96

10 15 0.0013 0.51 13.8 0.5 2 23 1385 1406 1384 1406 0.97

11 15 0.21 82 6.9 4.5 1 23 1412 1435 1412 1435 0.97

12 15 0.0064 2.5 11.6 2.5 1 23 1472 1496 1472 1496 0.96

13 15 0.13 53 7.5 0.7 1 23 1578 1601 1578 1601 0.95

14 15 0.005 2 12.0 0.5 3 23 1651 1671 1649 1671 0.96

15 15 0.011 4.6 10.8 5.9 1 23 1677 1699 1677 1699 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00099	0.39	14.2	0.5	1	23	139	161	139	161	0.98
2	15	0.0013	0.52	13.8	0.2	1	23	179	201	179	201	0.97
3	15	2.1e-07	8.2e-05	25.8	0.7	1	23	207	229	207	229	0.98
4	15	0.67	2.6e+02	5.3	3.6	2	23	347	369	347	370	0.94
5	15	0.018	7.2	10.2	0.6	1	21	421	441	421	441	0.95
6	15	0.042	17	9.0	0.1	1	23	608	630	608	630	0.97
7	15	6.9e-06	0.0027	21.0	2.6	1	23	642	664	642	664	0.99
8	15	0.0079	3.1	11.3	4.3	1	23	670	693	670	693	0.97
9	15	0.0011	0.43	14.0	2.8	1	23	1121	1144	1121	1144	0.96
10	15	0.0013	0.51	13.8	0.5	2	23	1385	1406	1384	1406	0.97
11	15	0.21	82	6.9	4.5	1	23	1412	1435	1412	1435	0.97
12	15	0.0064	2.5	11.6	2.5	1	23	1472	1496	1472	1496	0.96
13	15	0.13	53	7.5	0.7	1	23	1578	1601	1578	1601	0.95
14	15	0.005	2	12.0	0.5	3	23	1651	1671	1649	1671	0.96
15	15	0.011	4.6	10.8	5.9	1	23	1677	1699	1677	1699	0.98

Sequence Information

Coding Sequence: ATGACAAAGTTCCCTAAGATACCTCCGTGTCATCGGTATTTTCACCCTGATAAAAGTCGTTTTCTGATGTTCAAATCTAATGAAAAGCCGGGAACAACACCGAGAGTCAAGGTAGAGCTACGGCGTTGCATCCATATAATAAATAGTGTAATTACAGATACCCCCAGTGACAGGTGTGTAGAGGCAGCAGaTATGGCCACCAAAACTTTGCAAGTTTCATCTCCTCAGATAATGAAGCCAAATGAAGATAGATCTGTTAATATATCCAACAATACCAAAGAAGACAATCAAACCAAAGACAGCAACAGTATTAGTCAAGACAAATATAGTCAAGAAAGGAATCTTTCTCTAGTCCAAAAGAGTGTTGACTCAGAGGAAGAACATAAAGAAAGTCTTCACAAGGAGGATACCAAGTATGCCTGTCCAATTTGTGACACAATCTTGTTTTCCTCTCATGACTTTACAATTCATATTAGGTCACACAATGATATTTTGTCCAAAGAGCTCAACCTATTTTCTGCAGCTGGCAAAGGATTTGTGTGTAGGCTTTGCGAAAAAGTTCTCAGTTCTGCCAATTCGCTGGAGAGACACACTCTTATACACTCAGCAGAGCAACCATttgtgtgtaaagtgtgtggtgtGTCTTTTTCAACTAATGGGAATTTGTATCGGCACATGAAGAGCCATAGAGCAAAAAATTGTGATAGTATCAATTATGACAGTGATGCCAGTTCTGAAAGCCTTGGATCTGTCAATACAGAGTCATCATCTCCTATGCTCTTAAACTTGAAGAAGAGAATAGAAACAAGGACATCATCAGAATTCAACAACAATGTTATTGAGTTTACACCATCTAACAATGGAAACACAAAGAGAAAATCTGATATGGATGATGTAAATACAGTGAGGAAAAGAAAATGTGATAGCAAAAAGTACTACTCAGACAAGTTTGATTGTTCTTTATGTGATAAAACTGGGTtcttaactttaaatttgttagAAACTCATATCGAAGAGTACCATCCTGAGCACAAAGCCAAATGTGATTCTTGCAATTTGGTATTTAAGAACCACCGTGTGTTAAATCTTCATAGATATATGGCTCATCACACTAATCAACACTCATTGTTAAATGGAAAACAAGCTACTATTGGATTTAAAGATTTGACTTTTGTAGATTTTTCTAGTGAAAAGTTTCCTCACATAGCCAGAGTAGTTTGTGAACAGAGTTTGCACCATGCAAGCAGTCTGTATCACAGGTTTCAGTGTGAAAAATGCGACCGAGCATTTCCCTGTGAGTCCGCCCTCAAAATTCACCAACAATGCTGCGGACAGGAAAACTATGCTTCTTCTGGGGAAAGTTGGCATCAAGATAATGACTTATCCTCTAGTGACAATGAAGCACCGACAGACCTTAGTAGAGGAAAACGATCTAAATGGAGTGAATCAAAAATGTCAGAGAGTTCTGATGAAGTTGAAGATGAAAGAAGAAGGGACACATTTTTTGCTGGTcttgatttacaaaataaatcagtGCTGAGTATTTCTGATCCAGATATATCATCTGTGAAAGACAGGTTTAGAAGAAATTCATATTTCAAGCCTAATAATGAATGTAAGGATTTAGCAGATATTCAAAGTATTATATCTGTTGCATCAGTAGGAGGACTTCTCCATGATCTTTCCAAATCACCTCAACCAACAGTATTAGAAGTAACGCCACCAGATTCAGGGTCGAGGGCTGCTATTTATGATTCTGCTGTAACAGATGAAGAAGACTGTTTTGCTGCAGAATTCAGAAAAATGAAATTACGAGGAGAATTTCCTTGCAGACTTTGTACTGCTGTTTTTCCAAACTTAAGAGCTTTAAAGGGCCATAACAGAGTTCATTTAACAAGCAATGGTGGGCCAAATGGCGAACCTTATCGTTGTAACATGTGTTCACATTCCAGCTCTGATAAGTCAGCTTTGATAAGACATATGCGGACACATAATGGTGATAGGCCTTATGAATGTGCACTGTGTCATTATGCTTTCACCACCAAAGCCAACTGTGAACGTCATTTAAGGAATAGACATGCAAAAATGACTCGTGAAGATgtgaaaaaatcaataatttatcatCCCTCCGAAGATCATTTGAATGAGATTGAACAGAAGCCAAGCCGTGATGATGTGAAGCGCTCTTTGTTTTGTGAAAAAGACTCAACAAAATCACTAGAAAATAAGGatataataaaaactgaaaaagcACCAAATCTTTTGAAAGCTATTGAACGAGCTCCTCCTGTTTTTGAATCTCTTCATACACATGTACCTTCTGCATTTAAACACGGACAAAAATTAACTTATGCCCATGATGGACTTGCTAATGAAATTGGAGAGAGAAAAAGTTTAGATGTGGGGACAATGACTTATGAAGAGAATGAATCATTATGTTCATTTGCTTCTGATACAAATGGTAAAAGTGGAATTGAAGGAGACGCTCCTTTAGATCTTTCAATGGACGTATTAGATttgagtaaaaagaaaaacaacataGTTGAGCATTTATCTAATAGTAAAGAGTCCAGTGAAAGTGACGAGGAAACAGAACCTCAAGATTTATCAAAAAAGACAATTTTGCCAAATAAAAAGAGTTGCTATCCACTGAACGACACAACCTTGGAAAGAGCAACCAAACTACCTCAAAATATTCCATCGAGCTTTTCTCAGGATTTGAAAGAAACAAATTCTCCTCACTACTTATATGACAGAGAGAGTTCTGCACCTACAAGTCAAGCTGCTTTGCCACAATTGGACATGTCAAAGTTTTACACTGCGAATGCCCATCCATTTTATTTAAGGAATAATGCATACACCCCATTTCCATCAACAACTCCCCTACAGCCTGGACCATATTCACCTTATTTTGTAGCCCCACCTCCACCTGTTATATTTCCAACAAACACTAACAATGAATTTGTTGAAATGAAAGAAAGACTACAGAAAGAATTAATCCGGGGCTTACAGTTGACATCTGGAGGCTCTCTAGTTCTTGATCAGATTGCAATGGCAAATGCAGCAGAAAGAATCCAAAGTCTCCATCAACAAGCAATGGCTGAGTTTAATTGGCGAATGGAAAactcaaaagaagaaaaaaagatttATTCACCTTCTCTGAATAAGGAGGTGAAATCAATATCTCATGCTGACaatgaaaaagaaatcaaaaGTCATGAACTAAACCAGCCAAAAGTGTCTGAAAAGTTAGCACTTTTAAAGCCAAAACAAGATACATCATCTTCAGTAAAAATGGTAATTAAAAATGGTGTTTTGATTCCTAAGCAGAAACAGAGACGATATCGCACTGAAAGACCTTTCTCTTGTGAGCATTGTTCGGCTAGATTCACTTTAAGGTCAAACATGGAACGGCATATAAAACAACAACACCCTCAGTTTTGGTCACAAAGGCAGAGAAATGCTGCAAGTATGCCAGCCAGACGAAATAACCCATTATCATCAAAACCACCACAAACTATTCTTAACCATAGCCAATTTTCCTCTCATTCTggaacatataatttaaaatctgaAGATGAGTTGTCTAGATCATCAGTTACTAATGATCATTCTAATTGTGATTCCAAGCCAAATTTAATTGAAGGGAAACCCTGCATATCAGAAGAGGTGAAAAATGCCATAGCacaacagttaaaattaaaactatcacCATCAGATACAAATATTGATGGAGATAATGAAGATGGTCTTATGGacgaagaagaagatgaagattTAGTTATTGATGAAGAAGTTAAAGATGAAGAATCTTGTCAGAATGGAAATACTAAAGAGGAAGAAAcagaaaatataagaaaaaagataTCACACAACGAGGAAAATCAGGACTTAGCCAGTGTTCCTAGACTAATTGACAATTTAGACAATGTATCTAATCAAACATTCCGCCAATACTTTCATTCTGATGAAGATCATCCTGGTGGTGAAGGAAGTGAGGAAGATGAAGAAGGCCTTGTTGCTGCTGGAAGCACAAGTGAAGGCTGCAACTCTGGAAGTGATGAAAATCGATCTGAACCTGAGAACAACAGTGGAACCAATCCTACTGCAGTCAAGAAAAAGAGTGCATATTCTCTAGCACCCAATCGTGTGTCTTGCCCATACTGTTTTCGGAAGTTTCCATGGTCTTCGTCTCTTCGTAGGCACGTACTCACTCACACTGGCCAGAAACCATACAAATGTTCATTCTGCCCTCTTCTTTTCACTACTAAGTCGAACTGTGATCGGCACTTACTTAGGAAACATGGAGGAGGAATTCCTACTACAACTACAGAAAGTCAACCAGCAAGTGATGCTCTGTTGAGTAGCACCAATGCACCCAACTATACTATGAGAAATGTCCCCGAAAGACCTTACAAGTGCAAAAGCTGTCCAAGCTCAACATTTTCAACCTTGAGCAACTTGAAAAAACATCTCTCTACCAAACACAATACGTCTTTTTCAACTAAAGGTGAAGGAGCCCAAAGTGGATATGAAAGCCAAGGAAGTATAAGTGAAGAGATTGATGTTGGAGAAAACGAACAATGCAAACTAGAAATAGAGAAGGAGAAAAAGGTTGTTTCAGATCCGAGAGAAATTCATCCAGGACATTCGGAGATAACAAACTTTATGAAGTCTAATCCTCTTCCGGTAGAGCATAACTTTGTTGTGACTCCTCCATCAGACTTACCCTTTAAGTGCCATCTATGTGAAGGAAGTTTCTCTGAGAGGCAAGAAGCATTGGACCACATCCGAGACAACCACAGTGCTGAGTTCCAGTTGCTAGTTTCTAAGGGTGCTCTTGAGACTGGTGCTATGACAGAAGATACTCAAGGACCCGAAGAGGCTGGAGAAGAAAGTGTAGACAATCTAAGGGGAAAGTTTCCAGATTATGCTAACAGAAAGgtGATGTGTGCATTTTGTTTGCGGCGATTTTGGTCTGCAGAAGACTTACGAAGGCACATGCGTACACATACAGGTGAGCGCCCATTCTCCTGTGACATTTGTCGACGTCGCTTCACACTAAAGCACAGCATGCTGAGGCATCGCAAGAAACATTCATTCCCTCATAACTCAGCCACGGAGGAGACCTCACCTGTGAGTGATGAGGATGTGAATGCAACAACAACCTCGTCAACAAaccacaacaacaacaacaacacaaTCTTGCCCAACAAACCTTGGATAAAGTCTCGACTGGAAGAGGAATCTGATCTGATAAGCAACTTATTGGGGATCCAAGATAAAACAATCGTTGATAAAATGCTGATTTCCAAATCAGCAGATGATGCAGCTAAACTCCTAGGTGTTCAGAAGTAA
Protein Sequence: MTKFPKIPPCHRYFHPDKSRFLMFKSNEKPGTTPRVKVELRRCIHIINSVITDTPSDRCVEAADMATKTLQVSSPQIMKPNEDRSVNISNNTKEDNQTKDSNSISQDKYSQERNLSLVQKSVDSEEEHKESLHKEDTKYACPICDTILFSSHDFTIHIRSHNDILSKELNLFSAAGKGFVCRLCEKVLSSANSLERHTLIHSAEQPFVCKVCGVSFSTNGNLYRHMKSHRAKNCDSINYDSDASSESLGSVNTESSSPMLLNLKKRIETRTSSEFNNNVIEFTPSNNGNTKRKSDMDDVNTVRKRKCDSKKYYSDKFDCSLCDKTGFLTLNLLETHIEEYHPEHKAKCDSCNLVFKNHRVLNLHRYMAHHTNQHSLLNGKQATIGFKDLTFVDFSSEKFPHIARVVCEQSLHHASSLYHRFQCEKCDRAFPCESALKIHQQCCGQENYASSGESWHQDNDLSSSDNEAPTDLSRGKRSKWSESKMSESSDEVEDERRRDTFFAGLDLQNKSVLSISDPDISSVKDRFRRNSYFKPNNECKDLADIQSIISVASVGGLLHDLSKSPQPTVLEVTPPDSGSRAAIYDSAVTDEEDCFAAEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRVHLTSNGGPNGEPYRCNMCSHSSSDKSALIRHMRTHNGDRPYECALCHYAFTTKANCERHLRNRHAKMTREDVKKSIIYHPSEDHLNEIEQKPSRDDVKRSLFCEKDSTKSLENKDIIKTEKAPNLLKAIERAPPVFESLHTHVPSAFKHGQKLTYAHDGLANEIGERKSLDVGTMTYEENESLCSFASDTNGKSGIEGDAPLDLSMDVLDLSKKKNNIVEHLSNSKESSESDEETEPQDLSKKTILPNKKSCYPLNDTTLERATKLPQNIPSSFSQDLKETNSPHYLYDRESSAPTSQAALPQLDMSKFYTANAHPFYLRNNAYTPFPSTTPLQPGPYSPYFVAPPPPVIFPTNTNNEFVEMKERLQKELIRGLQLTSGGSLVLDQIAMANAAERIQSLHQQAMAEFNWRMENSKEEKKIYSPSLNKEVKSISHADNEKEIKSHELNQPKVSEKLALLKPKQDTSSSVKMVIKNGVLIPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRNAASMPARRNNPLSSKPPQTILNHSQFSSHSGTYNLKSEDELSRSSVTNDHSNCDSKPNLIEGKPCISEEVKNAIAQQLKLKLSPSDTNIDGDNEDGLMDEEEDEDLVIDEEVKDEESCQNGNTKEEETENIRKKISHNEENQDLASVPRLIDNLDNVSNQTFRQYFHSDEDHPGGEGSEEDEEGLVAAGSTSEGCNSGSDENRSEPENNSGTNPTAVKKKSAYSLAPNRVSCPYCFRKFPWSSSLRRHVLTHTGQKPYKCSFCPLLFTTKSNCDRHLLRKHGGGIPTTTTESQPASDALLSSTNAPNYTMRNVPERPYKCKSCPSSTFSTLSNLKKHLSTKHNTSFSTKGEGAQSGYESQGSISEEIDVGENEQCKLEIEKEKKVVSDPREIHPGHSEITNFMKSNPLPVEHNFVVTPPSDLPFKCHLCEGSFSERQEALDHIRDNHSAEFQLLVSKGALETGAMTEDTQGPEEAGEESVDNLRGKFPDYANRKVMCAFCLRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHSFPHNSATEETSPVSDEDVNATTTSSTNHNNNNNTILPNKPWIKSRLEEESDLISNLLGIQDKTIVDKMLISKSADDAAKLLGVQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -