Basic Information

Insect: Stictocephala bisonia
Gene Symbol: -
Assembly: GCA_035578905.1
Location: JAQJVL010000072.1:507936-512439[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.24 1.8e+02 5.2 0.1 2 23 48 69 47 74 0.89

2 9 0.24 1.8e+02 5.2 0.1 2 23 83 104 82 109 0.89

3 9 0.24 1.8e+02 5.2 0.1 2 23 118 139 117 144 0.89

4 9 0.24 1.8e+02 5.2 0.1 2 23 153 174 152 179 0.89

5 9 0.24 1.8e+02 5.2 0.1 2 23 217 238 216 243 0.89

6 9 0.24 1.8e+02 5.2 0.1 2 23 252 273 251 278 0.89

7 9 0.24 1.8e+02 5.2 0.1 2 23 287 308 286 313 0.89

8 9 0.24 1.8e+02 5.2 0.1 2 23 322 343 321 348 0.89

9 9 0.21 1.6e+02 5.4 0.1 2 23 357 378 356 393 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.24	1.8e+02	5.2	0.1	2	23	48	69	47	74	0.89
2	9	0.24	1.8e+02	5.2	0.1	2	23	83	104	82	109	0.89
3	9	0.24	1.8e+02	5.2	0.1	2	23	118	139	117	144	0.89
4	9	0.24	1.8e+02	5.2	0.1	2	23	153	174	152	179	0.89
5	9	0.24	1.8e+02	5.2	0.1	2	23	217	238	216	243	0.89
6	9	0.24	1.8e+02	5.2	0.1	2	23	252	273	251	278	0.89
7	9	0.24	1.8e+02	5.2	0.1	2	23	287	308	286	313	0.89
8	9	0.24	1.8e+02	5.2	0.1	2	23	322	343	321	348	0.89
9	9	0.21	1.6e+02	5.4	0.1	2	23	357	378	356	393	0.90

Sequence Information

Coding Sequence: ATGAAACAACATCGGTTCCAATTCGTAGCCCTGAGTTGCCCCAGTGTTGACCCTGGAATTGATCCAGACAGACAGCCAAAGATCAAGTGTTTACCGTGCGGCTTCTTGCTGGGTCGGCTTGGGGAGCTGAAGTATAAGTCCACAGTGTTGTGCTTGGTTTACAAGAATGAGTACACAAAACAGAAGATCAAGTGTCTACCGTGCGGCTTCTTGCTGGGTCGGCTTGGGGAGCTAAAGTATAAGTCCACAGTGTTGTGCTTGGTTTACAAGAATGAGTACACAAAACAGAAGATCAAGTGTCTACCGTGCGGCTTCTTGCTGGGTCGGCTTGGGGACCTAAAGTATAAGTCCACAGTGTTGTGCTTGGTTTACAAGAATGAGTACACAAAACAGAAGATCAAGTGTCTACCGTGCGGCTTCTTGCTGGGTCGGCTTGGGGAGCTAAAGTATAAGTCCACAGTGTTGTGCTTGGTTTACAAGAATGAGTACACAAAACAGAAGATCAAGTGTCTACCGTGCGGCTTCTTGCTGGGTCGGCTTGGGGAGCTGAAGTATAAGTACACAAAACAGAAGATCAGTGTCTACCAAGATCAGTGTCTACCGTGCGGCTTCTTGCTGGGTCGGCTTGGGGAGCTACAGTATAAGTCCACAGTGTTGTGCTTGGTTTACAAGAATGAGTACACAAAACAGAAGATCAAGTGTCTACCGTGCGGCTTCTTGCTGGGTCGGCTTGGGGAGCTAAAGTATAAGTCCACAGTGTTGTGCTTGGTTTACAAGAATGAGTACACAAAACAGAAGATCAAGTGTCTACCGTGCGGCTTCTTGCTGGGTCGGCTTGGGGAGCTAAAGTATAAGTCCACAGTGTTGTGCTTGGTTTACAAGAATGAGTACACAAAACAGAAGATCAAGTGTCTACCGTGCGGCTTCTTGCTGGGTCGGCTTGGGGAGCTAAAGTATAAGTCCACAGTGTTGTGCTTGGTTTACAAGAATGAGTACACAAAACAGAAGATCAAGTGTCTACCGTGCGGCTTCTTGCTGGGTCGGCTTGGGGAGCTAAAGTATAAGTCCACAGTGTTGTGCTTGGTTTACAAGAATGAGTACACAAAACAGAAGATCAAGTGTCTACCGTGCGGCTTCTTGCTGGGTCGGCTTGGGGAGTTAAAGTATAAGTCCACAGTGTTGTGCTTGGTTTACCTCACTGCAGAATATTGTGCTACGGTGTTGCTGAAGATGAATAACATGAAATCCATGTTTAATAAAATTGGTTCATGA
Protein Sequence: MKQHRFQFVALSCPSVDPGIDPDRQPKIKCLPCGFLLGRLGELKYKSTVLCLVYKNEYTKQKIKCLPCGFLLGRLGELKYKSTVLCLVYKNEYTKQKIKCLPCGFLLGRLGDLKYKSTVLCLVYKNEYTKQKIKCLPCGFLLGRLGELKYKSTVLCLVYKNEYTKQKIKCLPCGFLLGRLGELKYKYTKQKISVYQDQCLPCGFLLGRLGELQYKSTVLCLVYKNEYTKQKIKCLPCGFLLGRLGELKYKSTVLCLVYKNEYTKQKIKCLPCGFLLGRLGELKYKSTVLCLVYKNEYTKQKIKCLPCGFLLGRLGELKYKSTVLCLVYKNEYTKQKIKCLPCGFLLGRLGELKYKSTVLCLVYKNEYTKQKIKCLPCGFLLGRLGELKYKSTVLCLVYLTAEYCATVLLKMNNMKSMFNKIGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -