Basic Information

Transcription Factor Domain

TF Family: NDT80_PhoG
Domain: NDT80_PhoG domain
PFAM: PF05224
TF Group: Unclassified Structure
Description: This family includes the DNA-binding region of NDT80 [2] as well as PhoG and its homologues. The family contains Swiss:Q05534 or VIB-1. VIB-1 is thought to be a regulator of conidiation in Neurospora crassa and shares a region of similarity to PHOG, a possible phosphate nonrepressible acid phosphatase in Aspergillus nidulans. It has been found that vib-1 is not the structural gene for nonrepressible acid phosphatase, but rather may regulate nonrepressible acid phosphatase activity [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0029 1.5e+02 5.5 0.0 2 28 18 44 17 52 0.88

2 9 0.0029 1.5e+02 5.5 0.0 2 28 54 80 53 88 0.88

3 9 0.0098 4.9e+02 3.8 0.0 2 28 90 116 89 124 0.88

4 9 0.014 6.9e+02 3.4 0.0 2 28 126 152 125 159 0.88

5 9 0.0029 1.5e+02 5.5 0.0 2 28 162 188 161 196 0.88

6 9 0.012 5.9e+02 3.6 0.0 2 28 198 224 197 232 0.88

7 9 0.013 6.5e+02 3.4 0.0 2 28 234 260 233 268 0.88

8 9 0.021 1.1e+03 2.8 0.0 2 28 270 296 269 304 0.87

9 9 0.0064 3.2e+02 4.4 0.0 2 26 306 330 305 339 0.88

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0029	1.5e+02	5.5	2	28	18	44	17	52	0.88
2	9	0.0029	1.5e+02	5.5	2	28	54	80	53	88	0.88
3	9	0.0098	4.9e+02	3.8	2	28	90	116	89	124	0.88
4	9	0.014	6.9e+02	3.4	2	28	126	152	125	159	0.88
5	9	0.0029	1.5e+02	5.5	2	28	162	188	161	196	0.88
6	9	0.012	5.9e+02	3.6	2	28	198	224	197	232	0.88
7	9	0.013	6.5e+02	3.4	2	28	234	260	233	268	0.88
8	9	0.021	1.1e+03	2.8	2	28	270	296	269	304	0.87
9	9	0.0064	3.2e+02	4.4	2	26	306	330	305	339	0.88

Coding Sequence: ATGACGTTTCCGCAGTTCCCTCGTCTCGTGCTGAATGTTAAGAGAGAtggaattattatttacaaaagaaatgaaaCGACCTTGGAGTTAACGTTCAGTCTGAAGAGAATGAAGTTTCCGCAGTTCCCTCGTCTCGTGCTGAATGTTAAGAGAGAtggaattattatttacaaaagaaatgaaaCGACCTTGGAGTTAACGTTCAGTCTGAAGAGAATGAAGTTTCCGCAGTTCCCTCGTCTCGTGCTGAATGTTAAGAGAGatagaattattatttacaagAGAAATGAAACGGCCTTGGAGTTAACGTTCAGTCTGAAGAGAATGAAGTTTCCGCAGTTCCCTCGTCTCGTGCTGAATGTTAAGAGAGAtggaattattatttacaaaagaaatgaaaCGACCTTTGAGTTAACGTTCAGTCTGAAGAGAATGAAGTTTCCGCAGTTCCCTCGTCTCGTGCTGAATGTTAAGAGAGAtggaattattatttacaaaagaaatgaaaCGACCTTGGAGTTAACGTTCAGTCTGAAGAGAATGAAGTTTCCGCAGTTCCCTCGTCTCGTGCTGAATGTTAAGAGAGAtggaattattatttacaaaagaaatgaaaCGGCCTTGGAGTTAACGTTCAGTCTGAAGAGAATGAAGTTTCCGCAGTTCCCTCGTCTCGTGCTGAATGTTAAGAGAGAtggaattattatttacaaaagaaatgaaaCGACCTTTGAGTTAACGTTCAGTCTGAAGAGAATGAAGTTTCCGCAGTTCCCTCGTCTCGTGCTGAATGTTAAGAGAGAtggaattattatttacaaaagaaatgaaaCGACCTTTGAGTTAACGTTCAGTCTGAAGAGAATGAAGATTCCGCAGTTCCCTCGTCTCGTGCTGAATGTTAAGAGAGAtggaattattatttacaaaagaaatgaaaCGACCTTGGAGTTAACGTTCAGTCTGAAGAGAATGAAGTTTCCGCAGTTCTCTCCTCTCGTGCTGAATGAGGGATGCAATTATTTACATAAGATATAA
Protein Sequence: MTFPQFPRLVLNVKRDGIIIYKRNETTLELTFSLKRMKFPQFPRLVLNVKRDGIIIYKRNETTLELTFSLKRMKFPQFPRLVLNVKRDRIIIYKRNETALELTFSLKRMKFPQFPRLVLNVKRDGIIIYKRNETTFELTFSLKRMKFPQFPRLVLNVKRDGIIIYKRNETTLELTFSLKRMKFPQFPRLVLNVKRDGIIIYKRNETALELTFSLKRMKFPQFPRLVLNVKRDGIIIYKRNETTFELTFSLKRMKFPQFPRLVLNVKRDGIIIYKRNETTFELTFSLKRMKIPQFPRLVLNVKRDGIIIYKRNETTLELTFSLKRMKFPQFSPLVLNEGCNYLHKI

Sequence clustering based on sequence similarity using MMseqs2