Sbis046836.1
Basic Information
- Insect
- Stictocephala bisonia
- Gene Symbol
- CAMTA1_1
- Assembly
- GCA_035578905.1
- Location
- JAQJVL010000199.1:701497-711810[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-16 1.2e-10 44.1 0.4 78 116 3 40 1 40 0.94 2 2 0.27 4e+04 -2.7 0.1 18 37 185 204 175 207 0.73
Sequence Information
- Coding Sequence
- ATGCAAAAAAggTGTATATACGGATGCTACGTACACTCTGCCATCCTGCCCACATTTCACAGGCGCTGCTACTGGCTTCTTCAGAATCCTGACATCGTGCTGGTTCACTACCTCAACGTGCCATACCCTGATGACAACAAACTGGCGGTGATAACCCCATCGCTGGCACTGTGGGGTGACAAGAAGGAATGGACCAAGGAGGAGTTGGTCAGCCAACTGAAGCCCATGTTTTACAGTGAGGATGAACCTGATCTGAACAATGAACTAGAAATCtcaACAGCAGAGACTGTGGAGGCCATAGTGTCCCAGCTGATGGAAAAGCAGCGGTCGGCACGAGCAGCAGCCCTCAATAAACAGCTGGAGTGTGGGTGTCCCGACTCCACCTGTGTGGACTCCAAGAACTGTTCCCAGCCCATTCGCAGGATATCTGCCGCACAACAGAGTAACAACCAGGTGTCGTCTACAACAATGCTCAACCACCAGCAGCACAACGGCAGTGGTCGAGTGATGGCTGTCACTCACCAGCAAGCCAGAGCCATGACACTTCACCACTCCCACCTGTCGCACCACACCCAGGTGACCAATAACGACCAACAGCAGCCTTCGTCCACCAACTCAACTACTTCTCCGTTGGTATTAAGTCTTTCCCAAATCCAAGGGTCGGGCGGGCTGCTGATCCTCAACTCCAACTCTCCCAGTCCGTCCCCCAGCCCTGCCGTCGTCACGTCCTTTGTGTCCGCTCGGCCACGCAAGAACACCAAGCATGAAGCCATGGAGGTAACTGTGTGCTCAACGTCAGCTCTTGTCTGTGGTTGCAGATTTTGTGGTGGAATTGTATTATTTGGTTTCGGTTATCGTTTATTTAACTAA
- Protein Sequence
- MQKRCIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWGDKKEWTKEELVSQLKPMFYSEDEPDLNNELEISTAETVEAIVSQLMEKQRSARAAALNKQLECGCPDSTCVDSKNCSQPIRRISAAQQSNNQVSSTTMLNHQQHNGSGRVMAVTHQQARAMTLHHSHLSHHTQVTNNDQQQPSSTNSTTSPLVLSLSQIQGSGGLLILNSNSPSPSPSPAVVTSFVSARPRKNTKHEAMEVTVCSTSALVCGCRFCGGIVLFGFGYRLFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -