Basic Information

Gene Symbol
MYSM1
Assembly
GCA_035578905.1
Location
JAQJVL010000103.1:1742334-1778994[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-10 2e-06 30.8 0.0 3 41 78 116 76 120 0.95

Sequence Information

Coding Sequence
atggAAGAAGATGATGAAATTGATGTACTGGGGGAATTTAATTTAGAAAGTCTGTTAAGGAAAGACGAAGAACGAATatCGTCCTGCTACGATGGCGATCACCAGTTGGGTCTTCACTGTGAATCTCAGTGGATGCTAGATACAACTTCACAAGCATGTTGGTATGACAACAAGTCAGATCCACAGAAGCCACTTGGGGGATTTTCAGCTGTTGATTCATGTGAAAGTAACACATGGACTGATAAAGAGAGATATTTACTAGAAAAAGGcttgGAACTTTTTGGGAGAAGTTGGTCACGACTGGCTCAGTATATCGGAACTAAGAATGCCAATCAAGTCAAGTCGTATGTGAGGTCTGCGGGGAGTGGATGTGTTGGCAAGTCATCTGGCTCAACATCTAGCTTTGGTATTGACAGCATGGACTTGAACTTCTCtgagttaattaatgatatggATATTCCAGCTTCTATGGAAGAAGTTATCGCTGTTGTGAGCACTGCCCAACCCACCGTTGTCCTGCCTACTTTGAAGAGAGACAATACTATTGAGACCAATATCCTTTCTCCTAAAAAGCTGAAAAGTCGCCTGAAGAAAAATATTGCCTTTGAAACCAAGAGGAGACTATATAATCAAAAACCAAAGGAAGTTGTTCACAATTACAATGCAGAGGATATAAAAGTAGTACTAACGGATAATAAGGAGCGTGACCATATAGTATTACCAAACGGTGAACAAGTGATTCGAATTCGTCATGGAACAAGTTTAAGTGAAGATAGTGATATAGATGTGGATGTGGATTCAGATTTGGAGAAAGACAAAGTTGAGCTACCTTTAGAGAAAAAGGAGTGCCAAAAAGAAGAAGTTCATGACATAAAAGAAGTTGTTGTTAAAGTGGAAGTGGATTCAGATTTGGAGAAAGGCAAAGTTGAGCTACCTTTAGAGAAAAAGGAGTGCCAAAAAGGAGAAGTTCATGACATAAAAGAAGTTGTTGTTAAAGTGGAAGTGGATTCAGATTTGGAGAAAGGCAAAGTTGAGCTACCTTTAGAGAAAAAGGAGTGCCAAAAAGGAGAAGTTCATGACATAAAAGAAGTTGTTGTTAAAGTGGAAGTGGATTCAGATTTGGAGAAAGGCAAAGTTGAGCTACCTTTAGAGAAAAAGGAGTGCCAAAAAGGAGAAGTTCATGACATAAAAGAAGTTGTTGTTAAAGTGGAAGTGGATTCAGATTTGGAGAAAGGCAAAGTTGAGCTACCTTTAGAGAAAAAGGAGTGCCAAAAAGGAGAAGTTCATGACATAAAAGAAGTTGTCATTAAAGTGGAAGAGTGTTTTCAGTGTGAAGAGGATGTGCCTACGTCACTTGATAGTCCTCACAACCAGAAGGAAGAAACCAAAGAACATTTTGTTGatactaaaaagaaaaaagtgtcaCTGTTATCAGGAAGTTTGGAACAGCaagaaaaaattcataaaaaagaaaCACAAGTTTTTAAGGGAAATCTTATGACTCCCAGTGGAAAAATAATGACTGTTGTTGTAGATGATATGCCTTATGAATTAAATGAAGCAGAAGTAAATGGATCCAAATATTTGTCTACAGTGCAAGACTGGCTCGATGTAGTCTACCAGTTGCCACCTCCAACTCAGGAAAAGGTTATTGATTGTTGTATTGTAACTGAAGAGGAAAAACTACTGCATCCTGAATTCTTTTCTAAATCGCGCCAAGTGCTACAAAGATATCTTAAGATCCGTAACCACATATTAGATTACTGGAAAAAATCCAAGCCAAATTATGTGACAAAAACATCAGTAAGGGTCGGATTGAAGAGTTGTGGAGATGTTAATCTTATAAGTAGAATTCATGCCTATCTCGAACAGAGAGGCTACATCAACTTTGGATGTGATCAATGCCATTATAAAAACAAGGCCAGCTCACAACCAACCTATAATCCTCATACTGTAAATGGTGATAAAGATGTGGTTGACGAAGAAGTAAATCGTGTTGAACAGTCACCAGCCCCTCTGCCAGCAGATAAACATGATGGCAGTAGATCACGTAAAAAGAAGCTTCCGTTCGATGAAATATCTCATGAAGGAGGGTACACCTTGATGCATACAGATTCAGGGGAAGTGGTTCAGGTTCAGACCTCTTTCAAAAAAGTAAGAACCAAAAGAACCAAACCAGTTAAGCTAATTCATTGCAAAAGTCATTCTGCTGGAAATAAGGCACCGTACAAAGTGGAGATGGAAGTGTCGGCTCTCATTCCGATAGATGTTCACAGTCATCTGTCTCCCAAATGTGAAGTGATCGGCTTGCTGGGTGGCAAGTATAGACCTCATGGTGGCGGTGTACTCAGTATCACAGTCGCAGTGCCCTGCCGTACCATCCTCAGTAGTAACATACATTGTGATATGTGTCCTGTTTCTCAACTTGAAAGCAGTGAGGCTATAAAGGACAGAGGACTGTCAGTCGTTGGGTGGTATCACTCTCACCCTGAGTTTGATCCTTCGCCCTCAGATACGGACATCGACACTCAGAACTCACTTCAGTCATGGTTCAATAGAACGGGAAATCCATTTGTGGGTCTCATAATATCCCCGTACTCCTCAAAAAACTGTATATCCACTTACAgGTGCTGTCATGTAATAATGGAAAAGGGAGATCTCACGCCATATAAACTTGACGTTACACTCACCAATGTGGATTATGACATTGGAGTATTGAGGAAGTCTATTGAGGCAGCACATAAGGTGCTACAAAATAGTGGATCTTTTAAGCCTCGATATGCTTATTTCAAGGTATGGAGATACCTATTATCTGATTTGCTACGGGATATGATTGTGATATATATTTCTCTTGTAAAACTAATGGTATCTAATGTAGTATTTACTTGTTCAAACATTGAATGGCTTAGTGTTAACCTTTAG
Protein Sequence
MEEDDEIDVLGEFNLESLLRKDEERISSCYDGDHQLGLHCESQWMLDTTSQACWYDNKSDPQKPLGGFSAVDSCESNTWTDKERYLLEKGLELFGRSWSRLAQYIGTKNANQVKSYVRSAGSGCVGKSSGSTSSFGIDSMDLNFSELINDMDIPASMEEVIAVVSTAQPTVVLPTLKRDNTIETNILSPKKLKSRLKKNIAFETKRRLYNQKPKEVVHNYNAEDIKVVLTDNKERDHIVLPNGEQVIRIRHGTSLSEDSDIDVDVDSDLEKDKVELPLEKKECQKEEVHDIKEVVVKVEVDSDLEKGKVELPLEKKECQKGEVHDIKEVVVKVEVDSDLEKGKVELPLEKKECQKGEVHDIKEVVVKVEVDSDLEKGKVELPLEKKECQKGEVHDIKEVVVKVEVDSDLEKGKVELPLEKKECQKGEVHDIKEVVIKVEECFQCEEDVPTSLDSPHNQKEETKEHFVDTKKKKVSLLSGSLEQQEKIHKKETQVFKGNLMTPSGKIMTVVVDDMPYELNEAEVNGSKYLSTVQDWLDVVYQLPPPTQEKVIDCCIVTEEEKLLHPEFFSKSRQVLQRYLKIRNHILDYWKKSKPNYVTKTSVRVGLKSCGDVNLISRIHAYLEQRGYINFGCDQCHYKNKASSQPTYNPHTVNGDKDVVDEEVNRVEQSPAPLPADKHDGSRSRKKKLPFDEISHEGGYTLMHTDSGEVVQVQTSFKKVRTKRTKPVKLIHCKSHSAGNKAPYKVEMEVSALIPIDVHSHLSPKCEVIGLLGGKYRPHGGGVLSITVAVPCRTILSSNIHCDMCPVSQLESSEAIKDRGLSVVGWYHSHPEFDPSPSDTDIDTQNSLQSWFNRTGNPFVGLIISPYSSKNCISTYRCCHVIMEKGDLTPYKLDVTLTNVDYDIGVLRKSIEAAHKVLQNSGSFKPRYAYFKVWRYLLSDLLRDMIVIYISLVKLMVSNVVFTCSNIEWLSVNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-