Basic Information

Gene Symbol
-
Assembly
GCA_035578905.1
Location
JAQJVL010000002.1:11709834-11713190[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 3.8 2.3e+04 -1.4 0.1 4 17 236 249 234 250 0.89
2 6 0.12 7e+02 3.4 0.0 33 46 329 342 325 342 0.89
3 6 3.5e-10 2.1e-06 30.7 0.0 1 45 348 394 348 395 0.95
4 6 3.3e-09 2e-05 27.6 0.3 1 44 403 450 403 452 0.96
5 6 7.1e-08 0.00043 23.3 0.0 1 46 458 503 458 503 0.97
6 6 1.1e-13 6.8e-10 41.9 0.3 2 43 511 553 510 555 0.96

Sequence Information

Coding Sequence
ATGGAGGAAGATGTAGAGATTGAGTTGTTATTAAAGTCCAATGAAGAAATGCTAATGCAGGAAGCAGCTAAGTTGAGAGAAGATGAGAGAGAGTCATCAATTgtatcaaatacaataaatagtgaTGATGAGGGGATGAATTACAATGACGAGGTACAAGAACTTTTAGATGATCACATTGTTTCATATATGGCCAAAGAACCAACCAAGCATGTGTCTCAGTTACATTCCCTGTCCTCTGACGATGAGAATGATAGGAGTGAGTATGAGAGTGATGGGGATCAGTTTATAAATGAGATCATGTCACAAAGTGAACAGTATGGAGGAAGCTTTATGGAGCACGTGAAAAAAGTTATTGGTAATAAAGATTCTCAAATTAAGTATTCTGCCATCAGCGAACTTACATCTGCCCATAGAATGATTATAGAAAGAGAAAACTTATTGAAAAGTTTAGAACTTAAATTTCAAGAAAAACTCTATTCAATagaagaaaatatacaatatactcGAGAAAGCATTACCTCATTGTCTGATCATACCGTTAGTAAGATGAGAGAGCCAAGCTATTCCAGAAGTTATTTTAGAAAGTTTGGGGCTCCTTATTTTAAGGATGCTCATGGGTTTTGCCCTTCACCTAATGCAGATCAtgcaagtaaattaaaaacagatcAAACTGCATTAGTATTTATTGAAAATCCCTGTTATTGGACTAAAGACCATCAAAAAAAGCTAACGGATGCTATTAAAGAAACTCTTACAGTTGAAAAAAGTGATAAGTTAATAAAGGAAATTAGGAAAATGAAAGAAATGTTTGTTGAAGCGCCAGAAAAGAAAAATGACAATTTACTACTTGAAAAACTTGCGAAGTATCAACAAGAACtgaatagtataaaaaataagtCATTTGAAGAACTTATATGTGATGAAAATCAAGATAGAGAATTCGATTGGATGAGATATTCTGTGTATTTGTTTGATGGAGAACATAGTCCTGATGAATGTAAACGATTTTGGAATGTATATTTAAAACCTGGCATTAATAAATCTAGCTGGGAGTATGCAGAGGATTTAAGACTGTTGGATATAGCAGAACAAATGGAGTTCCAGGATTGGAATTCTATTGCAAAATTACTTGGAACAAATCGTTCTGCTTATCAGTGTTTTGTTCATTTTCAAACCAGGCTTAATGCCATGCATGATTTCTCTAAAGGAAAATGGACCAAAGAAGAGGACAAAAAACTGTTAGATGTTATTAATGCCTCAAGAATTGGAAATTTTATCCCTTGGACAAAAGTGTCTTGTCACATGACGAATCGAAATCATACACAAATTTACAATAGGTTTAAGAAAAGCTTGGATCCAAAATTAATTAAAGGGAGGTTTACAAGAGGAGAAGATTTGTTGATTGTTGCAGGAGTTGAAGTCTTTGGATGCAATTTCAAAGAATTATCATCACTTTTGAGCAATAGATCATGTGGTCAAATAAGGGAACGATATGACAGATATCTACTTCCAAAATATAGAAGGGTTGGTACCTGGTCTCTTGAAGAAGATCAGCAACTAATTAGACTAGTGGAGAAGCATGGTGAACAGAATTGGGCTGAAATATCAAGAGTTATGAAAATCAGAACAAGAACTCAAACTAGACAAAGGTATagatttattcaacaaaatatgaaaacaaaagcCGGGTGGtcaattaataatatcaaacGTAGAAAAATTCATATAACTGATAAGAGTTTAGAACGCACGAAGAGGAATGTTGAGAAAATCAAGGAAGAGATCAAGCAAGTAGAGCGAGCGTTTAATTTGACCAAAATTGAAAAAGACACTTTTCGAATTGAAAAATTGAAAGAATTGAGAGATAGTGTACTAATGAAGCCATACAAATCACGACGCAGGAAAAAAATGCCTGCAGATTGTTCAAATGTTAATAAGCTGCTAGATGATTTTTTCAAGAACAATCAAATAAAAGCACCAGAATTATCAAAAGTTGATAATTTTGTtgattacaaacattattttgatgAACTAAATATGTTGGCAATGAATTTAGGGTATGAATTACAAATACCTGGTGATGAAGATGAGATTTTAAATAATCCAAGATTAAGTAATAGTTTGAAAAATGTTCTCCTAGAGTCAATTCAGAGCAAAACATTTGATCGTTCTGTACAGTCTAATGAAGACTCGACTCCCACTTTTAGTGGTAGTTACAAGACCAGTATTGATTACATCCCACCTGAATCAGATTCAAGCATTATAATTAATGAGTGCTGGTTTAATCCACCCATAGACGTATCACGTTTGAACTTTACTGAATTATTTAAATCAACTGTCTTTGACTATTCATGTGGTATGCACCGAGACATATGGAAGACAAAAATCAAGCAATCTACTCTAATTAACTCAAGTTCTTTTACCAATGATATACATGAGCCTCCATCAACTGAGCGACAGCTATACAACTTGCCTCCTAATCTCTTAACAACACTTTGTTTCAAATCTGCATTGCTAAGCAGAGCCAGGTTAAGGAATGACTGTGGAAAAGAAGATAATAGAAATCTTTCTTTAGaggaaaatgaaagaaataaTGATGTAAACAGTGATGTTGATATTAACAGTTATTTAGATGTATTTCAAGAAACTTTGTTAACGTTGTTTACTTGGCCCAGAGCTCTTTTCCTCAGTAGTATGTCTAATGCTAATACTAAAGCAAGTGCAGAAACTGTTTCTTGTCAGcagaacattaaaaataaaaatgttaccaactTATCAAAACAATCACATATTAAGGCAAATAAAAAACCATCACAAGTTAAGTTAAAACAGACCAAGGATATTAAGCGTGAAAATTTATTGGTTAAAAAAGAAACTGGCTGcaaaagaaaaatgaagattgaGCACTTGTTACCAGATGTAAAAAATGAATCGCATGTCAATCCACATCTATTTAATGAAGTACTCACTACTATGCATTCCAAAAGCACTGTATCAAAAAAGTTAGGATCAAATAACGAAAATATTTCTCCTgctaatcattttatatttaataaaagcaaAAAATCTACAGTTAATCATAAAACATCCACGGGGAAAAAATTACCTTGCGTAAAGGAGAATACAGGAATGTTAAAATCATCTGTAAACACGAACAAAGAATCCAAAGAAGTTTTAGAACAGTCACCTAAACTAACATTACAGACTTATAGGAGGGGAAAGAAGCGAAAAATTGATTCTAATAGCATATCTGATTCAAGGAAGAAGAGCGATATTACTTCATCAGAATTAATGGTGCAACATGTTAAAAAGGAAAGAGAGTGTTGTTCTAACTGCAATAAGTCCGATGTTTGA
Protein Sequence
MEEDVEIELLLKSNEEMLMQEAAKLREDERESSIVSNTINSDDEGMNYNDEVQELLDDHIVSYMAKEPTKHVSQLHSLSSDDENDRSEYESDGDQFINEIMSQSEQYGGSFMEHVKKVIGNKDSQIKYSAISELTSAHRMIIERENLLKSLELKFQEKLYSIEENIQYTRESITSLSDHTVSKMREPSYSRSYFRKFGAPYFKDAHGFCPSPNADHASKLKTDQTALVFIENPCYWTKDHQKKLTDAIKETLTVEKSDKLIKEIRKMKEMFVEAPEKKNDNLLLEKLAKYQQELNSIKNKSFEELICDENQDREFDWMRYSVYLFDGEHSPDECKRFWNVYLKPGINKSSWEYAEDLRLLDIAEQMEFQDWNSIAKLLGTNRSAYQCFVHFQTRLNAMHDFSKGKWTKEEDKKLLDVINASRIGNFIPWTKVSCHMTNRNHTQIYNRFKKSLDPKLIKGRFTRGEDLLIVAGVEVFGCNFKELSSLLSNRSCGQIRERYDRYLLPKYRRVGTWSLEEDQQLIRLVEKHGEQNWAEISRVMKIRTRTQTRQRYRFIQQNMKTKAGWSINNIKRRKIHITDKSLERTKRNVEKIKEEIKQVERAFNLTKIEKDTFRIEKLKELRDSVLMKPYKSRRRKKMPADCSNVNKLLDDFFKNNQIKAPELSKVDNFVDYKHYFDELNMLAMNLGYELQIPGDEDEILNNPRLSNSLKNVLLESIQSKTFDRSVQSNEDSTPTFSGSYKTSIDYIPPESDSSIIINECWFNPPIDVSRLNFTELFKSTVFDYSCGMHRDIWKTKIKQSTLINSSSFTNDIHEPPSTERQLYNLPPNLLTTLCFKSALLSRARLRNDCGKEDNRNLSLEENERNNDVNSDVDINSYLDVFQETLLTLFTWPRALFLSSMSNANTKASAETVSCQQNIKNKNVTNLSKQSHIKANKKPSQVKLKQTKDIKRENLLVKKETGCKRKMKIEHLLPDVKNESHVNPHLFNEVLTTMHSKSTVSKKLGSNNENISPANHFIFNKSKKSTVNHKTSTGKKLPCVKENTGMLKSSVNTNKESKEVLEQSPKLTLQTYRRGKKRKIDSNSISDSRKKSDITSSELMVQHVKKERECCSNCNKSDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-