Sbis013826.1
Basic Information
- Insect
- Stictocephala bisonia
- Gene Symbol
- -
- Assembly
- GCA_035578905.1
- Location
- JAQJVL010000024.1:3482921-3485158[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.3e-07 0.00019 24.0 0.0 1 39 15 55 15 58 0.93
Sequence Information
- Coding Sequence
- ATGGTTAGGAAGTATATAAAGAAAACAGATAGGGCTAATATTTCTGAAGAATCTATAGTAGCAGCATTAAATGACTATAGAAATGGTAACTACCGATCCATTAGGGAAGCTGCCGAAGCCCATGGGCTTAAAAAGTCGACCCTACATTTCAGACTCAACAAAGTAAAGCAAAAGGAAGTCAACAATGAGAATAGGCTTATAGCTAATGAGCCTAACAATGGTAATGGAGCTGATGAGCTTAACAATGAGGATCATGTCAATGAGCCTGTGGGCAATGAAAATGTAACTTTATTTCAAGAGGTTGAAGATGAGCACCAGCCAGTAAAAGAGGTTACTATAGAAGATATGGCCCCTGTTTATAACACTAAATACTCTCAAAGACAAGTATTTACACCTGAACAGGAACAAAAAATTGCAGACTACTGCATTGAAAGGTCCAGAATGAACTATGGCCTAACTTACATGATGGCCAGGGAATTAGCCTTCAAATATGCCTTAGCTTTGAATCTCGAACAACGCATACCTGCTAAATGGCGTACTACAGGCTTAGCAGGAGAAGAATGGCTAAACCATTTTATGAAGAGACATCAAGGACTTTCACTCCGCCAAGCAGAAAAGACTAGTCTGTCCAGGAACACTAGCTTTAATAAACACAATGTGGGAACGTATTTTGACAACCTAGAAACTTTGTTCGCAAAAGTAGCAGTTCCTCCGTcaagaattttaaatttggacGAGAGTGGAATAAGTACTGTGCTGGAGGCGCCAAAAGTGATTGCAGCAAAGGGAACAAAACAGGTGGGCCAAGTCGTATCAGGAGAGAGGGGGGAGCAAATAACTTTCTGTGCCATCATATGCGCCGATGGGAGTTACTTGCCACCAATTTACATTTTCCCAAGAAAACGCCCAAACTTTGCCTACATGATTGGGGCACCTGAAGGAAGCAAAGATCTTTATTCTGATTCTGGTTGGATGACATCAGCTCTCTTTTTAGAGACGCTTAAACATATCCAAAAGGCCACAAAATGTTCTAAAGAAAACCCCGTGGTTTTAACCCTGGATAATCATGAGTCCCACATTGGCTTGGATGTGGTGATGTACAGCAGAGATCATGGCATACATATGATCACTAGCCCTccacacacaacacacaaaaGTCAGCCGCTGGATGTAGCAGTTTTTAGTCCGTTTAAAAGGCGCTTACGTTCTGAATTCAATCTTTGGCTATCTCAACATCCTGGTCATACAATTACAATTCGAGAAATTGCTCAGCTTACTGCTAAACCATTTGTTGAATCTTTCACTGCATCTAACATCAAAAGTGGATTTCGTAAAGCTGGAATCTATCCACTCAGCCGCAGTGTGTTCACTGACAATGATTTCAAGGGTGCCAGTGTGACTGACCGTGTTATGTTATCGCAAGTTGAAGAAACCAACAACCAAAATCCAGTGCCTGGTACATCACGTGACTTTCCGTTGATGGAAAACACCCAAAGCTCTGACGACCCACAAGGCTCACAATCAACTATTGACCAGAATGTACCTGGCCCATCAACGCCACAACCAGTAAATGTTAAAAGACCTACTACATTGACGCTTACTCCAGAGGATGTCATGCCTTACCCCAAATACGTTCCTAAGGGAAAGGAAAGGCGAGGCCGAAAAAAAGGTCGTTCGCGAATTCTGACTGATACTCCAGAGAAAGATGCTCTTGTAGCGgagttaaaagaaaaagaagagaaGAAAATGTTGGtggaaaaaagaaaacaagagAGGGCAGTAAAAAAGgaaattaagaagaaaaaaactgaGGGGGTCTGGAGAAAGCCGTATCAAGATGACTCATCTAGCAACGAAGATGAGATACAAATAAAACTAGACGATGGAGGCCTTAGTCCAGAAGACTTTTCTGAGGATGAAGAAGAACTGTTTGATTTCCTTCCTGATAAAAAGTATGGCACAAATGACTTCATACTGACAAAGTTTGCTTCTAAGAAGACCATCTACCACTTTATTGCCCAAATAGAGGAGCATGTGACTGATGGTTTCAGTGTGAAATTTCTCAAAAAGAACCAAAACTCTTACAAGTTTTACTTCCCAGAAAATGTTGAAGTCAGCTTTGTCGAATCCAAAGACATTGAGTTCAAGCTGCTACAACCAGATATAATTGGTGGGACATCCAGAGCAGCAAACTGCTTTGTTTTCAAGGAAAATTTGActacttttaatttcaaatag
- Protein Sequence
- MVRKYIKKTDRANISEESIVAALNDYRNGNYRSIREAAEAHGLKKSTLHFRLNKVKQKEVNNENRLIANEPNNGNGADELNNEDHVNEPVGNENVTLFQEVEDEHQPVKEVTIEDMAPVYNTKYSQRQVFTPEQEQKIADYCIERSRMNYGLTYMMARELAFKYALALNLEQRIPAKWRTTGLAGEEWLNHFMKRHQGLSLRQAEKTSLSRNTSFNKHNVGTYFDNLETLFAKVAVPPSRILNLDESGISTVLEAPKVIAAKGTKQVGQVVSGERGEQITFCAIICADGSYLPPIYIFPRKRPNFAYMIGAPEGSKDLYSDSGWMTSALFLETLKHIQKATKCSKENPVVLTLDNHESHIGLDVVMYSRDHGIHMITSPPHTTHKSQPLDVAVFSPFKRRLRSEFNLWLSQHPGHTITIREIAQLTAKPFVESFTASNIKSGFRKAGIYPLSRSVFTDNDFKGASVTDRVMLSQVEETNNQNPVPGTSRDFPLMENTQSSDDPQGSQSTIDQNVPGPSTPQPVNVKRPTTLTLTPEDVMPYPKYVPKGKERRGRKKGRSRILTDTPEKDALVAELKEKEEKKMLVEKRKQERAVKKEIKKKKTEGVWRKPYQDDSSSNEDEIQIKLDDGGLSPEDFSEDEEELFDFLPDKKYGTNDFILTKFASKKTIYHFIAQIEEHVTDGFSVKFLKKNQNSYKFYFPENVEVSFVESKDIEFKLLQPDIIGGTSRAANCFVFKENLTTFNFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01372567;
- 90% Identity
- iTF_01372566;
- 80% Identity
- -