Sbis065315.1
Basic Information
- Insect
- Stictocephala bisonia
- Gene Symbol
- -
- Assembly
- GCA_035578905.1
- Location
- JAQJVL010000397.1:843643-844020[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.4e-08 2.3e-05 27.0 0.0 2 40 16 54 15 57 0.86
Sequence Information
- Coding Sequence
- ATGGTCAGAAATCATAAGAAAAAGACTAATCGGGGGGAAGTTGCTCCAGATGTCATGCTCACTGCAGTTAGGAAAGTAAAAATTGAAGGCATATCTATCCGTAAAGCTGCTGCTGATTTCCAAATTAATTATCGAACTCTTGCCAGATATTGCAAGAAAATTCCTCAagatgaaattgataatttagaTATTGCTCAGCCTTCTACCATCATTGGATATTTCCCTAATAGAAAGGATTTTTCCACTGATGAGGAACAAGAATTAAAGGCTTACATTCTTCAAGCAGCAGATATTTATTGTGGTTTAACTCCTAGAGAAATCAAAACTCTGGCCTATGAAATGTGTGTTGCAAATTCTATTGTATGTCCTAAatcttga
- Protein Sequence
- MVRNHKKKTNRGEVAPDVMLTAVRKVKIEGISIRKAAADFQINYRTLARYCKKIPQDEIDNLDIAQPSTIIGYFPNRKDFSTDEEQELKAYILQAADIYCGLTPREIKTLAYEMCVANSIVCPKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01372463; iTF_01372467; iTF_01372576; iTF_01372496;
- 90% Identity
- iTF_01372463; iTF_01372496; iTF_01372467; iTF_01372576;
- 80% Identity
- -