Basic Information

Insect: Stictocephala bisonia
Gene Symbol: -
Assembly: GCA_035578905.1
Location: JAQJVL010000991.1:217845-219803[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.8e-09 3.6e-06 29.6 0.0 4 38 56 90 53 94 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.8e-09	3.6e-06	29.6	0.0	4	38	56	90	53	94	0.92

Sequence Information

Coding Sequence: ATGCTGGTAATGTGGAAGCACAACACTGAGGTAAATGTGGAAACGTTTCCACATTTCCCTCACTTATTTGTTGTGTTAACTACATTTCCTTTGCGCTCTTTTCAGATGCCAAGAAAGGTTATTGGCTGCAAACCCAAGGGTAAATTGAAGAATTGGGATGACCAATCTATGATGAAAGCGATTGTCTCAGTGAGAGAAAAGAAGATGGGTTTGAGAAAAGCTGTCAAACTTTACCACGTTCCTCAAACAACATTACAAAGATTTGTCAATAGTGATAAAACACCTGAAGAATGTGTTAATCTCAAAGTGGGACGAAAATCGGTTTTACCTGCCCATTTGGAAACTGAGTTAGTTGAACATTTGGTAGAAATGGATAACCGTTTCTACGGGTTAAGAAGGGATGATGTAAAACGATTGGCCTACCAGTTAGCTGTTCGAAACAATGTTCCACATCCATTTCTGAATGAAACTGCAGGCCGAGCCTGGTTTGATTTGTTTATAAGACGTCACAAGAATAGGCTTACTATACACAAACCAATCGGGACCTCATTTTCTCGAGCgaattgttttaataaagaaGTTATTGACAAATTTTTTAACATGTTACAGACTGAGTACGATAAACATCCCTATCCGAGTGACAGGGTATTTAACGTAGATGAAACAGGATTAACAATTGTGCAGAGCAAGATACCACATGTTGTTGGATTAAAGGGAAAAAGGCAAGTGGGAGCGATCACGTCGGCAGAACGTGGTTCTCTCGTTACAGTAATCTGTTGTATGAGCGCAGGGGGTACGTTTGTACCTCCTATGCTGATCTTTCCCAGGAAAAACATGACAAATGCTCTCATGAGAGGAGCACCACCAGGATCACTCGGCAGATGCCATCCATCTGGATGGATTCAAACAGATCTATTTACACAGTGGTTCAACCACTTTCTTCAAAAGACACATCCAAGTGAAGAGTCCCCTGTCCTCTTAATTCTCGATGGGCACAATACCCACACAAGGAATCTTCAAATAATTCACCTTGCTCGTGAAAATCATGTGACAATAGTCAGCATCCCACCACATACATCCCACAAAACTCAACCGTTAGACAAATCCTTTATGGGGCCATTAAAAAGTTACTATAGTGAGTATGTTCGCCAATTTTTGAGACATAATGATCGGCCTGTGGGCCCTTATGACATTGCTGAACTTTTTGGTAAGGCCTACCTGCAATGCCAAACAGGACTTATAGCTGCTTCTGGGTTTAAAGTTACAGGGATATACCCTTGTGACCGCAGTGTTTTTAAGGATGTTGATTTCCTACCTTCAGGATCTTCATTGGAAACAGAACCAGTTCAAATTTCAGGTGAACATAGGTCTATTCAGCCTCCTACAACTACCTCCCTTCAAAACACTGATATTTCTTCATGCGGACCCCTATCTGCTGCTGGAATACGAGATAGCCATTTCCGACCTAGTGATATCGATTTACAAGAAGCTGGCCCTTCAAATCAACCTGCTCCCTGTGTCTCACCTCGGGATATAATGCCTGTACCTGCGCCAAAGCGGAAAACTTCAAACAAAGGGAGAAAACCATCTTCAGCTGCAGTCATTACAAGCTCTCCATATAAAACAGCACTTGAAACAGTCTTGAAAAAGCCTAGAAATTCTTTTCCGAAAggtaaagggaaaagaaaacaaACCAAAACCTGCAAAAAAAAACTTGTACTTGAAGATAAGTCAGACAGCGATTCAATAGAATTATCTTCAGGGGAATCAATCTTAGAGATGCCTGTGGGTGAAATTCCAGGAGAAGAGGCTGACGCCACATGTATTTTTTGCGGGGAAGCGTTCTCAAATGATGTTCAAGGGGAACTATGGATTAAATGCTTGCTTTGTGAGTCATGGTGCCATACTTTATGCGCTGGAAGTGAAAACGAGcattatatttgtgatttttgtaagtaa
Protein Sequence: MLVMWKHNTEVNVETFPHFPHLFVVLTTFPLRSFQMPRKVIGCKPKGKLKNWDDQSMMKAIVSVREKKMGLRKAVKLYHVPQTTLQRFVNSDKTPEECVNLKVGRKSVLPAHLETELVEHLVEMDNRFYGLRRDDVKRLAYQLAVRNNVPHPFLNETAGRAWFDLFIRRHKNRLTIHKPIGTSFSRANCFNKEVIDKFFNMLQTEYDKHPYPSDRVFNVDETGLTIVQSKIPHVVGLKGKRQVGAITSAERGSLVTVICCMSAGGTFVPPMLIFPRKNMTNALMRGAPPGSLGRCHPSGWIQTDLFTQWFNHFLQKTHPSEESPVLLILDGHNTHTRNLQIIHLARENHVTIVSIPPHTSHKTQPLDKSFMGPLKSYYSEYVRQFLRHNDRPVGPYDIAELFGKAYLQCQTGLIAASGFKVTGIYPCDRSVFKDVDFLPSGSSLETEPVQISGEHRSIQPPTTTSLQNTDISSCGPLSAAGIRDSHFRPSDIDLQEAGPSNQPAPCVSPRDIMPVPAPKRKTSNKGRKPSSAAVITSSPYKTALETVLKKPRNSFPKGKGKRKQTKTCKKKLVLEDKSDSDSIELSSGESILEMPVGEIPGEEADATCIFCGEAFSNDVQGELWIKCLLCESWCHTLCAGSENEHYICDFCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01372435;
90% Identity: iTF_01372517;
80% Identity: iTF_01372465;