Sbis086715.1
Basic Information
- Insect
- Stictocephala bisonia
- Gene Symbol
- clz9
- Assembly
- GCA_035578905.1
- Location
- JAQJVL010000918.1:36448-41214[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-10 1.1e-07 34.3 0.0 3 39 91 127 89 132 0.92
Sequence Information
- Coding Sequence
- ATGGTGGCTAGCTACCCAAATAAGTCAGTAGCTACCCCAGTTGATCCCGGGAATCAGAGTAAGACAACTGATCAAGGGTGGCCATCTAAGATGAACGCGGGCTACCAAAGTAGGTCGATAGCTACCGAAGTTCATCAGCGGTGGATACCCGTTGATCAAGGGTGGTATCCCAATTTggctactaaaattgatcacGgGGATCTCATCATAATGGTAAGACATTACCAGCGGACGACCAATAGAGGAGCTGGCCCAAGTACATATTCTGTTGAAGACCTTGAGCAAGCTCTTCACGATGTGAAAAATGGAAATATGACGACCAAAGGAGCAGCAGCACATTATGGTATTCCAAGATCAACTCTAAAACATTATGTACATGGAACAAGAGGCAAaggaaaacaaacaattttcggACAAGGAGGGGGAGGGGTTATTTCCTACTTAAGCCAAAAGGAAGAACAGGAAATAGCGAATTGCCTAATAATAATGGATAGAAACGGTTATGGGCTTTCACGAACAGAAGTACTAGACTTGGTTGCAAACTACATAGCTCGTAATAACCTCATAACTAGATTTAAGAACAATCGTCCGGGCAATGATTGGTTTGTAGGATTTAAAAAACGACATGGTTTGACCCTAAAAAGAGCTCAAAGCATAGAGCACATCAGAGCTGACCAAACTTCTCCATGGGTCATTTATAAGTATTTTGATTTGCTAAGTAAGACAATGACTGAATTAAATTTGATGGGAAAACCAGGGCAGATATACAACTGCGACGAAACTGCTTTTTGCCACGATCCATCAAAAACAAAAGTGGTTTCTTTAGTTGGGAGTAAAAGTCAAAGGAAAACCTCTTCTTCTGGCAGAGAAAACACCACAGTGCTAATGTGTGGTGCAGCGGATGGCACAATGCTTCCTTCCCTTTGCGAATTTAGAGGGAAATTTGTAATGGAAAATTGGATAGGGGAAGAGGTTACAAAGACTGCAATATCAGTCTCGGAAAGAGGATGGATGGATTCAGCTTTATTTCTGTCATGGTTTAGGAAAATTTTTATTCCCAACATTGGTGAGCAACGGCCAGTTCTGTTAATCTATGATGGCCACGTCAGCCACGTTTCTGTGGATTTAATAAAACTGGCTCAACAACATAATGTGACAATAATGAAACTTCCTCCCCACACTACCCATATCCTTCAGCCATTAGACGTGGGGGTGTTTAAATCCATAAAAACAAATTGGGATAAGGAGCTGTGTGCATGGCAACGTCAAAATCCTCGAAAAAAGATACCGAAAGCTGAATTTGTTtcgattattaataaaattgtgcAAGATAACCATCAGAAACAAAACTTAATCTCGGGGTTTTCAGCTACTGGGATATATGATCCTGAAATGAAAGGACCCAATCGAGAAAAAATTAATGTAACGGTTTTTAAGCCAGGTCACTTGCAACAGTACAGAGCGGAGCAGAATGCAGCCCAAATGGGTGTGGTTCAAATCAATGAATCTCAAACCATACATGGAAGTAATCCATCAACGATGACTGAGCATGAGAATGGGCAGCAACTTGCACAAAACAATGAACCTGGAAGTTTTACATCAACCAACGAAATTTATCAGAATGTAAAGGAACTGACGGAAAATAATGAACCTGAAACCAGTTTTAGTGGAAGTTCTCCATCAACCTGCCAGGTTCCTCATAGTGGGCAGAAATTGGCTGAAAATAATGAACCTAGAAGCTTCGTGTCAACCAGCATGGATCACCAGAATGGACAGCAATTGACACAAAATAATCAACCTGACACCAATGTTCCTGAAATTTACCCATCAACCAGCCAACATCATCAGGGAGAACAGCGAAAAAGCTTTGAGGAACTACTTTTGGAGTTTGTGATAAACAAGCCATCTCCATCAGCAACAGGGAAAAAACGTAAAAGGGTTGTCACTGATGCTGAAATTATCACCACTCAAGAATTTCTCCAAATGAAAGAAAAGCAACATGATGAAAAGGCAGAAAAAAAAGAAGCAggagaaagaaaaagaaaagaaaataaaaaaagaaaacaaagttcAAAAATCTTCGAGAAAAAAAAGTGCTCTTCCAATACCAAGCAGTGA
- Protein Sequence
- MVASYPNKSVATPVDPGNQSKTTDQGWPSKMNAGYQSRSIATEVHQRWIPVDQGWYPNLATKIDHGDLIIMVRHYQRTTNRGAGPSTYSVEDLEQALHDVKNGNMTTKGAAAHYGIPRSTLKHYVHGTRGKGKQTIFGQGGGGVISYLSQKEEQEIANCLIIMDRNGYGLSRTEVLDLVANYIARNNLITRFKNNRPGNDWFVGFKKRHGLTLKRAQSIEHIRADQTSPWVIYKYFDLLSKTMTELNLMGKPGQIYNCDETAFCHDPSKTKVVSLVGSKSQRKTSSSGRENTTVLMCGAADGTMLPSLCEFRGKFVMENWIGEEVTKTAISVSERGWMDSALFLSWFRKIFIPNIGEQRPVLLIYDGHVSHVSVDLIKLAQQHNVTIMKLPPHTTHILQPLDVGVFKSIKTNWDKELCAWQRQNPRKKIPKAEFVSIINKIVQDNHQKQNLISGFSATGIYDPEMKGPNREKINVTVFKPGHLQQYRAEQNAAQMGVVQINESQTIHGSNPSTMTEHENGQQLAQNNEPGSFTSTNEIYQNVKELTENNEPETSFSGSSPSTCQVPHSGQKLAENNEPRSFVSTSMDHQNGQQLTQNNQPDTNVPEIYPSTSQHHQGEQRKSFEELLLEFVINKPSPSATGKKRKRVVTDAEIITTQEFLQMKEKQHDEKAEKKEAGERKRKENKKRKQSSKIFEKKKCSSNTKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01372352;
- 90% Identity
- iTF_01372391;
- 80% Identity
- -